EWM22392.1, cds8287 (CDS) Nannochloropsis gaditana

Overview
NameEWM22392.1
Unique Namecds8287
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:347821..348165 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22392.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100067g31.2680.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:347821..348165 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22392.1 vs. NCBI_GenBank
Match: gi|585102896|gb|EWM22392.1| (hypothetical protein Naga_100067g31 [Nannochloropsis gaditana])

HSP 1 Score: 236.884 bits (603), Expect = 4.335e-79
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 
Query:    1 MGARAAMQRQITGEQLTSFLCYDNFVPTIHSTSETAGPASRMQLGVHRLSFRSLIEKVACGCARISEGVQQQHKRYHGSESEARAIESRVRLIAILQGEGTEPNLSLKNFAYHC 114
            MGARAAMQRQITGEQLTSFLCYDNFVPTIHSTSETAGPASRMQLGVHRLSFRSLIEKVACGCARISEGVQQQHKRYHGSESEARAIESRVRLIAILQGEGTEPNLSLKNFAYHC
Sbjct:    1 MGARAAMQRQITGEQLTSFLCYDNFVPTIHSTSETAGPASRMQLGVHRLSFRSLIEKVACGCARISEGVQQQHKRYHGSESEARAIESRVRLIAILQGEGTEPNLSLKNFAYHC 114
The following BLAST results are available for this feature:
BLAST of EWM22392.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102896|gb|EWM22392.1|4.335e-79100.00hypothetical protein Naga_100067g31 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8311rna8311Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications