EWM22406.1, cds8277 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|585102910|gb|EWM22406.1| (pre-mrna-processing factor 40 [Nannochloropsis gaditana]) HSP 1 Score: 1894.01 bits (4905), Expect = 0.000e+0 Identity = 945/945 (100.00%), Postives = 945/945 (100.00%), Query Frame = 0
Query: 1 MFPTPPPHRKILFEQVQLAFTYLILHYGTLYSIHRHGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD 945
MFPTPPPHRKILFEQVQLAFTYLILHYGTLYSIHRHGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD
Sbjct: 1 MFPTPPPHRKILFEQVQLAFTYLILHYGTLYSIHRHGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD 945
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|585102909|gb|EWM22405.1| (pre-mrna-processing factor 40 [Nannochloropsis gaditana]) HSP 1 Score: 1813.12 bits (4695), Expect = 0.000e+0 Identity = 910/910 (100.00%), Postives = 910/910 (100.00%), Query Frame = 0
Query: 36 HGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD 945
HGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD
Sbjct: 14 HGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD 923
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|805754691|ref|XP_012138912.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A [Megachile rotundata]) HSP 1 Score: 209.534 bits (532), Expect = 9.568e-53 Identity = 175/593 (29.51%), Postives = 276/593 (46.54%), Query Frame = 0
Query: 55 GFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPP---AEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSD--GKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETI-----EILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPP---------------DERDGPP----SFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEE----KRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAI 613
PPPG+ P PP + ++ P I AP G+PP P P+ + A +PP E +WTEH DG+TYY+N VTK S ++KP L+ P + L C WKEY + GK YY + KES W P EL+ KA + AA+ A +A TI + L + G +A + +AA L A P PP D R P F +EA+ AFK++L ++ V S A W K++ P + +K E+KQAF Y+T+++KEE+E +R R ++A++ + L E ++ S +++ + EE+ ++S + D+ D++ D + LAK+EKEE K+ N K A +L ++ +W+EAQA+L A E+ L E+ +E D FE+ + +LE E+K E++ R++ E R AF +L+ L E G + S W L P++ + + M+GQ G T +LF+ +V+DLK R+ ++K+ +R+ L EV E + +
Sbjct: 56 SIPPPGFSF---PITAAPPPDTGVIAAPPQITAP--GIPP-PAPLASETASTVPPIATTEKKTDWTEHKAPDGRTYYYNSVTKQSLWEKPDELKTPSELL---------LSQCPWKEYKSENGKVYYHNVTTKESRWTIPTELEELKA----------RIAAEEVAAAAAAVVASATNTIVPVGMQHLSPNIPITNTSQTSTPEPGGKSAIEQAMAA-TLAAINIPTPPAKPDEDSNSAKGSANDSRTSTPEPKMQFKDKKEAIEAFKELLRERDVPSNATWEQAVKLIQSDPRYPQMKRLNERKQAFNAYKTQKLKEEREHERLRLKKAKEDLEQFLLENDRMTSTTKYYKCEEMFGNLEVWRS--VGDSDRRDIYEDVIFNLAKREKEEAKQLKKRNTKRLAQVLDTMTDVT--------------------YRTTWQEAQALLLQHAAFAEDADLLEMDKE-DALLVFENHIRQLEKDEEEEKEHEKKRRKRQERKNRDAFISLLDELHEQGKLTSMSLWVELYPMLSADLRFSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVV 599
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|871244683|ref|XP_012940219.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A-like isoform X1 [Aplysia californica]) HSP 1 Score: 208.379 bits (529), Expect = 1.824e-52 Identity = 194/691 (28.08%), Postives = 324/691 (46.89%), Query Frame = 0
Query: 94 PLPPPVMATPAVPLPPAEDP-------------ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDG--KESLWEEPAELKAHKAEQAALDAGEVEVVVGSAA--ASLQAQQKAAVETIEILDDGASDEEVGKAGRAGT--NGVAAAKSGLAAVVLKAAVKPE----PPDERDGPPS-----FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRL----NQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPE-ERKALFEEHMAMLQ 750
P+ P + TP+ +PP P + W EH DG+ YY+N +TK S+++KP L+ P++ L C WKEY + GK Y+ + KES W +P EL GE+E ++ ++A +S+ + + + ++ E+ +A A +A + V++A V+P+ P E++ PP F +EA+ AFK +L +K V STA W K++ P + ALK EKKQAF EY+T+R KEEKEE+R RA++A++ + L +++S ++ +A+ + ED +KS ++ ++ D+F D V +AKKEKEE ++ N K F +L + P L +W EAQ +L R E+ L + +E D FED + LE + ++K ER ++ + R +F +L+ L G ++ S W L PVI ++ + M+GQ G T +LF+ +V+DLK R+ ++K+ +++ L G + E++ NAIL S S L+SG K + + E+ R E ++EARR +K +++LL ++ + +D W + LE A+ + E ER LF+EH+ ++
Sbjct: 48 PMNPANIPTPSA-MPPQAYPGGDKAATSTTEKRSAWGEHKAPDGRIYYYNSLTKESSWEKPEDLKSPQEKL---------LSQCPWKEYKSDAGKVYFHNSVTKESRWTKPKEL------------GELEAMIAASAPASSVDSPSNKS-------EPSSAIEQAMQATLASIELPPPPSAAAAATLPVVEAPVEPKKEPMPVAEKEEPPKKEQYIFRNKKEAIEAFKCLLKEKEVPSTASWESAMKLIINDPRYGALKHLNEKKQAFNEYKTQRAKEEKEEQRLRAKQAKEDLEQFLLHNDRMNSSIKYWKADTMFGEDEAWKS--VSERERRDLFDDVVHLIAKKEKEEAKVLRKRNIKVFTEIL--------------------DNMPNLTFTTTWSEAQQMLLDNPRFTEDPDLENMDKE-DALVCFEDHIRLLEQENDDEKERERRRLKRNQRKNRESFIVLLDELHHQGKLNSMSLWMDLFPVISQDMRFGSMLGQPGSTPLDLFKFYVEDLKSRFHDEKKVVKEILKEKGFFIEISTTYESFSNAIL------------------------SDKRSSNLDSGN--------IKLTY-------NSLLEKAEAREKERLKDEARRLKKLESAFKNLLSKH---NIDLDTKWDHIRPKLEGEQAFESITLEAERIRLFKEHLIAIE 644
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|524891428|ref|XP_005102247.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A-like isoform X2 [Aplysia californica]) HSP 1 Score: 207.608 bits (527), Expect = 2.643e-52 Identity = 194/691 (28.08%), Postives = 324/691 (46.89%), Query Frame = 0
Query: 94 PLPPPVMATPAVPLPPAEDP-------------ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDG--KESLWEEPAELKAHKAEQAALDAGEVEVVVGSAA--ASLQAQQKAAVETIEILDDGASDEEVGKAGRAGT--NGVAAAKSGLAAVVLKAAVKPE----PPDERDGPPS-----FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRL----NQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPE-ERKALFEEHMAMLQ 750
P+ P + TP+ +PP P + W EH DG+ YY+N +TK S+++KP L+ P++ L C WKEY + GK Y+ + KES W +P EL GE+E ++ ++A +S+ + + + ++ E+ +A A +A + V++A V+P+ P E++ PP F +EA+ AFK +L +K V STA W K++ P + ALK EKKQAF EY+T+R KEEKEE+R RA++A++ + L +++S ++ +A+ + ED +KS ++ ++ D+F D V +AKKEKEE ++ N K F +L + P L +W EAQ +L R E+ L + +E D FED + LE + ++K ER ++ + R +F +L+ L G ++ S W L PVI ++ + M+GQ G T +LF+ +V+DLK R+ ++K+ +++ L G + E++ NAIL S S L+SG K + + E+ R E ++EARR +K +++LL ++ + +D W + LE A+ + E ER LF+EH+ ++
Sbjct: 48 PMNPANIPTPSA-MPPQAYPGGDKAATSTTEKRSAWGEHKAPDGRIYYYNSLTKESSWEKPEDLKSPQEKL---------LSQCPWKEYKSDAGKVYFHNSVTKESRWTKPKEL------------GELEAMIAASAPASSVDSPSNKS-------EPSSAIEQAMQATLASIELPPPPSAAAAATLPVVEAPVEPKKEPMPVAEKEEPPKKEQYIFRNKKEAIEAFKCLLKEKEVPSTASWESAMKLIINDPRYGALKHLNEKKQAFNEYKTQRAKEEKEEQRLRAKQAKEDLEQFLLHNDRMNSSIKYWKADTMFGEDEAWKS--VSERERRDLFDDVVHLIAKKEKEEAKVLRKRNIKVFTEIL--------------------DNMPNLTFTTTWSEAQQMLLDNPRFTEDPDLENMDKE-DALVCFEDHIRLLEQENDDEKERERRRLKRNQRKNRESFIVLLDELHHQGKLNSMSLWMDLFPVISQDMRFGSMLGQPGSTPLDLFKFYVEDLKSRFHDEKKVVKEILKEKGFFIEISTTYESFSNAIL------------------------SDKRSSNLDSGN--------IKLTY-------NSLLEKAEAREKERLKDEARRLKKLESAFKNLLSKH---NIDLDTKWDHIRPKLEGEQAFESITLEAERIRLFKEHLIAIE 644
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|970900250|ref|XP_015115828.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A [Diachasma alloeum] >gi|970900252|ref|XP_015115829.1| PREDICTED: pre-mRNA-processing factor 40 homolog A [Diachasma alloeum]) HSP 1 Score: 202.986 bits (515), Expect = 1.673e-50 Identity = 187/647 (28.90%), Postives = 291/647 (44.98%), Query Frame = 0
Query: 37 GGPP-----PMNHPPPMMMGGPG------------------GFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPA----------------VPLP---PAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSD--GKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVET--IEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVV--LKAAVKPEPPDE------------RDGPP----SFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRL----NQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAIL 614
G PP P + PPMM GP PPPG+G P GPP ++ P I AP LP LPP ++PA P+P P E ++WTEH DG+TYY+N TK S ++KP L+ P + L C WKEY + GK YY + KES W P EL+ K ++ AAA+ +A T I L +S VG + +G +A + +AA + + P PDE R P F +EA+ AFK++L ++ V S A W KM+S P + ++K E+KQAF Y+T+R+KEEKE +R R ++A++ + L ++ S ++ + EE+ +K+ + D+ D++ D + LAK+EKEE +L N K A +L ++ +W+E Q++L + E+ L E+ +E D FE+ + +LE E+K E++ R++ E R F +L+ L E G + S W L P++ + + M+GQ G T +LF+ +V+DLK R+ ++K+ +R+ L EV E + +
Sbjct: 14 GYPPAAPNMPPGYGPPMMGSGPFIPPPGMPPGPPGMMPPQFSIPPPGFGY---PMGAGGPPEPGVIAAPPQITAP--ALPTLPPTDTSSPAPNPSPHPLTNPSTPTPAPVPSTSPIEKKSDWTEHKAPDGRTYYYNSTTKQSLWEKPDELKTPSELL---------LSQCPWKEYKSENGKVYYHNVTSKESRWTIPPELEELKNR----------ILAEEAAAAAAVAVASATNTGGISQLIQHSSPNVVG-TPESTNSGKSAIEQAMAATLAAINIPTPPAKPDEDSNSAKGSANGSRTSTPEPKVQFKDKKEAIEAFKELLKERDVPSNATWEQAVKMISSDPRYPSMKKLNERKQAFNAYKTQRLKEEKETERLRLKKAKEDLEQFLLNHERMTSTVKYYKCEEIYANLEIWKA--VGDSDRRDIYEDVIFNLAKREKEEMKLLKKRNTKKLAQVLDTMTDVT--------------------YRTTWQETQSLLLQHSAFAEDADLLEMDKE-DALLVFENHIRQLEKDEEEEKEREKKRRKRQERKNRDGFISLLDELHEQGKLTSMSLWVELYPMLSADLRFSAMLGQPGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEAFATVVC 612
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|551498379|ref|XP_005800742.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Xiphophorus maculatus]) HSP 1 Score: 201.06 bits (510), Expect = 6.806e-50 Identity = 188/621 (30.27%), Postives = 286/621 (46.05%), Query Frame = 0
Query: 38 GPPPMNHPPPMMMGGPGGFPPPGY-------------GMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPL------------PPAEDP---ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYY--SDGKESLWEEPAELKAHKAEQAALDAGEVEVVV--GSAAASLQAQQKAA-------VETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKP-------EPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSAL-KTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEE----KRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAG--AEVTAEWD 605
G PPM PP M P G PPG M+PP PG +LPP + P + P PP + T A P E P + WTEH DGKTYY+N TK ST++KP L+ P + L C WKEY + GK YY S KES W +P EL+ +A A ++G E +AA ++QA + A VET ++ + +V A V A + + V+ A KP E P+ + + T EEA AFK++L +KGVSS + W K++ P +SAL K EKKQAF Y+ + KEEKEE R + + +++ F + L ++ S +R+++AE++ E + S + D+ +++ D + LAKKEKE+ ++ N +A +L A ++ +W EAQ L E+ L+ + +E D FE+ + LE E K+ R+ + R +F++ L+ L + G + S W + P + + + M+GQ G T +LF+ +V+DLK RY ++KR ++D L G EV +D
Sbjct: 14 GIPPMGQRPPSMTPLPPGIMPPGIMPPMAAPPMGQMPSMIPPMIPGM------MLPP----RIPAATIQPTGPPGVDTTAPAAAAPGTTNATNGSPSEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQM---------LSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTETAAPGTTAAPTVQADKNTATMATVKEVETAVVVPE-EQQSQVTAHQTAEVKAVEAPVTSSESAVI-AESKPSVEVKEEERPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKEKFQRFLENHEKMTSTTRYKKAEQMFNELEVW--SCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVT--------------------YRTTWSEAQQYLLDNPTFAEDEELQNMDKE-DALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLDELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFLVEVNTSFD 590
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|1041112805|ref|XP_017279880.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A isoform X2 [Kryptolebias marmoratus]) HSP 1 Score: 199.519 bits (506), Expect = 3.092e-49 Identity = 175/552 (31.70%), Postives = 271/552 (49.09%), Query Frame = 0
Query: 88 PMGGLPPLPPP-VMATPAVP--------LPPAEDP---ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYY--SDGKESLWEEPAELKAHKAEQAALDAGEVEVVV--GSAAASLQAQQKAAVETIEILDDGA---SDEEVGKAGRAGTNGVAAAK----SGLAAVVLKAAVKPEPPDERDGPPS----FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSAL-KTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEE----KRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAG--AEVTAEWD 605
P + P PP V T A P P E P + WTEH DGKTYY+N TK ST++KP L+ P + L C WKEY + GK YY S KES W +P EL+ +A A + G EVV +AA ++QA A + T+ ++ A S+E +A T V AA+ S +AVV ++ E +ER P + T EEA AFK++L +KGV+S + W K++ P +SAL K EKKQAF Y+ + KEEKEE R + + +++ F + L ++ S +R+++AE++ E + S + D+ +++ D + LAKKEKE+ ++ N +A +L A ++ +W EAQ L E+ L+ + +E D FE+ + LE E+K+ R+ + R +F++ L+ L + G + S W + P + + + M+GQ G T +LF+ +V+DLK RY ++KR ++D L G EV +D
Sbjct: 109 PAAAVQPTGPPGVDTTTAAPGTTSTTNGSPQEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQL---------LSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTTEVVAPGTTAAPAVQADNTATMATVMEVETAAAVVSEEPQSQATMNQTAEVKAAEAPVTSSESAVVTESTASVEVKEERLEPVKKTYKWNTKEEAKQAFKELLKEKGVASNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFNELEVW--SCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVT--------------------YRTTWSEAQQYLLDNPTFAEDEELQNMDKE-DALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQKFLDELHDHGQLHSMSSWMEMYPTLSSDMRFANMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFSVEVNTSFD 628
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|617456109|ref|XP_007570339.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A [Poecilia formosa] >gi|961876476|ref|XP_014896634.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Poecilia latipinna]) HSP 1 Score: 199.134 bits (505), Expect = 3.557e-49 Identity = 190/622 (30.55%), Postives = 290/622 (46.62%), Query Frame = 0
Query: 38 GPPPMNHPPPMMMGGPGGFPPPGY-------------GMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPL-------------PPAEDP---ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYY--SDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQ---QKAAVETIEILDDGAS--DEEVGKAGRAGTNGVAAAKSGL----AAVVLKAAVKP-------EPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSAL-KTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEE----KRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAG--AEVTAEWD 605
G PPM PP M P G PPG M+PP PG +LPP + P + P PP + T VP PP E P + WTEH DGKTYY+N TK ST++KP L+ P + L C WKEY + GK YY S KES W +P EL+ +A A ++G E A+ AQ A+ T++ + A+ +E+ + T V A ++ + +AVV A KP E P+ + + T EEA AFK++L +KGVSS + W K++ P +SAL K EKKQAF Y+ + KEEKEE R + + +++ F + L ++ S +R+++AE++ E + S + D+ +++ D + LAKKEKE+ ++ N +A +L A ++ +W EAQ L E+ L+ + +E D FE+ + LE E K+ R+ + R +F++ L+ L + G + S W + P + + + M+GQ G T +LF+ +V+DLK RY ++KR ++D L G EV +D
Sbjct: 42 GIPPMAQRPPSMTPLPPGIMPPGIMPPMAAPPMGQMPSMIPPMIPGM------MLPP----RIPAATVQPTGPPGVDT-TVPAAAAPGTTSGTNGSPPEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQM---------LSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTEAAAPGTTAAPTAQADQNTTAMVTVKEAETAAAVPEEQQSQVTSHQTAEVKAVEAPVTSSESAVV--AESKPSVEVKEEERPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKEKFQRFLENHEKMTSTTRYKKAEQMFNELEVW--SCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVT--------------------YRTTWSEAQQYLLDNPTFAEDEELQNMDKE-DALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLDELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFLVEVNTSFD 618
BLAST of EWM22406.1 vs. NCBI_GenBank
Match: gi|524891430|ref|XP_005102248.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A-like isoform X3 [Aplysia californica]) HSP 1 Score: 197.978 bits (502), Expect = 4.262e-49 Identity = 202/715 (28.25%), Postives = 330/715 (46.15%), Query Frame = 0
Query: 57 PPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDG--KESLWEEPAELKAHKAEQAALDAGEVEVVVGSA--AASLQAQQKAAVETIEILDDGASDEEVGKAGRAGT--NGVAAAKSGLAAVVLKAAVKPE----PPDERDGPPS-----FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRL----NQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPE-ERKALFEEHMAMLQ 750
PPG + P P P SA +PP QA GG E + W EH DG+ YY+N +TK S+++KP L+ P++ L C WKEY + GK Y+ + KES W +P EL GE+E ++ ++ A+S+ + + + ++ E+ +A A +A + V++A V+P+ P E++ PP F +EA+ AFK +L +K V STA W K++ P + ALK EKKQAF EY+T+R KEEKEE+R RA++A++ + L +++S ++ +A+ + ED +KS ++ ++ D+F D V +AKKEKEE ++ N K F +L + P L +W EAQ +L R E+ L + +E D FED + LE + ++K ER ++ + R +F +L+ L G ++ S W L PVI ++ + M+GQ G T +LF+ +V+DLK R+ ++K+ +++ L G + E++ NAIL S S L+SG K + + E+ R E ++EARR +K +++LL ++ + +D W + LE A+ + E ER LF+EH+ ++
Sbjct: 29 MPPGMDPVFPMNPANIPTPSA-MPP----QAYPGG-----------DKAATSTTEKRSAWGEHKAPDGRIYYYNSLTKESSWEKPEDLKSPQEKL---------LSQCPWKEYKSDAGKVYFHNSVTKESRWTKPKEL------------GELEAMIAASAPASSVDSPSNKS-------EPSSAIEQAMQATLASIELPPPPSAAAAATLPVVEAPVEPKKEPMPVAEKEEPPKKEQYIFRNKKEAIEAFKCLLKEKEVPSTASWESAMKLIINDPRYGALKHLNEKKQAFNEYKTQRAKEEKEEQRLRAKQAKEDLEQFLLHNDRMNSSIKYWKADTMFGEDEAWKS--VSERERRDLFDDVVHLIAKKEKEEAKVLRKRNIKVFTEIL--------------------DNMPNLTFTTTWSEAQQMLLDNPRFTEDPDLENMDKE-DALVCFEDHIRLLEQENDDEKERERRRLKRNQRKNRESFIVLLDELHHQGKLNSMSLWMDLFPVISQDMRFGSMLGQPGSTPLDLFKFYVEDLKSRFHDEKKVVKEILKEKGFFIEISTTYESFSNAIL------------------------SDKRSSNLDSGN--------IKLTY-------NSLLEKAEAREKERLKDEARRLKKLESAFKNLLSKH---NIDLDTKWDHIRPKLEGEQAFESITLEAERIRLFKEHLIAIE 634 The following BLAST results are available for this feature:
BLAST of EWM22406.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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