EWM22405.1, cds8276 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|585102909|gb|EWM22405.1| (pre-mrna-processing factor 40 [Nannochloropsis gaditana]) HSP 1 Score: 1843.94 bits (4775), Expect = 0.000e+0 Identity = 923/923 (100.00%), Postives = 923/923 (100.00%), Query Frame = 0 Query: 1 MNGPPYFGPPRGMHGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD 923 MNGPPYFGPPRGMHGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD Sbjct: 1 MNGPPYFGPPRGMHGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD 923
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|585102910|gb|EWM22406.1| (pre-mrna-processing factor 40 [Nannochloropsis gaditana]) HSP 1 Score: 1813.12 bits (4695), Expect = 0.000e+0 Identity = 910/910 (100.00%), Postives = 910/910 (100.00%), Query Frame = 0 Query: 14 HGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD 923 HGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD Sbjct: 36 HGGPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKPEPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKELLQSKEREREREKDIGSEKGKESSGGKAAPKKKHEESSGSDSSSESSSSSSSSSSSSSSSDDSSSNQSDSEGEAGHGGKLKSGSRSGGGAKGRGRSDKKGAVKASKKAGKKEPKERRKRRRGGSDDGEGQDGRGTRKNRSRSRSRSRQKPGRSRSRSRSRSRSNDRAGKRKKKARARSGSRSD 945
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|871244683|ref|XP_012940219.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A-like isoform X1 [Aplysia californica]) HSP 1 Score: 207.994 bits (528), Expect = 2.289e-52 Identity = 194/691 (28.08%), Postives = 324/691 (46.89%), Query Frame = 0 Query: 72 PLPPPVMATPAVPLPPAEDP-------------ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDG--KESLWEEPAELKAHKAEQAALDAGEVEVVVGSAA--ASLQAQQKAAVETIEILDDGASDEEVGKAGRAGT--NGVAAAKSGLAAVVLKAAVKPE----PPDERDGPPS-----FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRL----NQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPE-ERKALFEEHMAMLQ 728 P+ P + TP+ +PP P + W EH DG+ YY+N +TK S+++KP L+ P++ L C WKEY + GK Y+ + KES W +P EL GE+E ++ ++A +S+ + + + ++ E+ +A A +A + V++A V+P+ P E++ PP F +EA+ AFK +L +K V STA W K++ P + ALK EKKQAF EY+T+R KEEKEE+R RA++A++ + L +++S ++ +A+ + ED +KS ++ ++ D+F D V +AKKEKEE ++ N K F +L + P L +W EAQ +L R E+ L + +E D FED + LE + ++K ER ++ + R +F +L+ L G ++ S W L PVI ++ + M+GQ G T +LF+ +V+DLK R+ ++K+ +++ L G + E++ NAIL S S L+SG K + + E+ R E ++EARR +K +++LL ++ + +D W + LE A+ + E ER LF+EH+ ++ Sbjct: 48 PMNPANIPTPSA-MPPQAYPGGDKAATSTTEKRSAWGEHKAPDGRIYYYNSLTKESSWEKPEDLKSPQEKL---------LSQCPWKEYKSDAGKVYFHNSVTKESRWTKPKEL------------GELEAMIAASAPASSVDSPSNKS-------EPSSAIEQAMQATLASIELPPPPSAAAAATLPVVEAPVEPKKEPMPVAEKEEPPKKEQYIFRNKKEAIEAFKCLLKEKEVPSTASWESAMKLIINDPRYGALKHLNEKKQAFNEYKTQRAKEEKEEQRLRAKQAKEDLEQFLLHNDRMNSSIKYWKADTMFGEDEAWKS--VSERERRDLFDDVVHLIAKKEKEEAKVLRKRNIKVFTEIL--------------------DNMPNLTFTTTWSEAQQMLLDNPRFTEDPDLENMDKE-DALVCFEDHIRLLEQENDDEKERERRRLKRNQRKNRESFIVLLDELHHQGKLNSMSLWMDLFPVISQDMRFGSMLGQPGSTPLDLFKFYVEDLKSRFHDEKKVVKEILKEKGFFIEISTTYESFSNAIL------------------------SDKRSSNLDSGN--------IKLTY-------NSLLEKAEAREKERLKDEARRLKKLESAFKNLLSKH---NIDLDTKWDHIRPKLEGEQAFESITLEAERIRLFKEHLIAIE 644
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|524891428|ref|XP_005102247.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A-like isoform X2 [Aplysia californica]) HSP 1 Score: 207.223 bits (526), Expect = 3.356e-52 Identity = 194/691 (28.08%), Postives = 324/691 (46.89%), Query Frame = 0 Query: 72 PLPPPVMATPAVPLPPAEDP-------------ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDG--KESLWEEPAELKAHKAEQAALDAGEVEVVVGSAA--ASLQAQQKAAVETIEILDDGASDEEVGKAGRAGT--NGVAAAKSGLAAVVLKAAVKPE----PPDERDGPPS-----FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRL----NQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPE-ERKALFEEHMAMLQ 728 P+ P + TP+ +PP P + W EH DG+ YY+N +TK S+++KP L+ P++ L C WKEY + GK Y+ + KES W +P EL GE+E ++ ++A +S+ + + + ++ E+ +A A +A + V++A V+P+ P E++ PP F +EA+ AFK +L +K V STA W K++ P + ALK EKKQAF EY+T+R KEEKEE+R RA++A++ + L +++S ++ +A+ + ED +KS ++ ++ D+F D V +AKKEKEE ++ N K F +L + P L +W EAQ +L R E+ L + +E D FED + LE + ++K ER ++ + R +F +L+ L G ++ S W L PVI ++ + M+GQ G T +LF+ +V+DLK R+ ++K+ +++ L G + E++ NAIL S S L+SG K + + E+ R E ++EARR +K +++LL ++ + +D W + LE A+ + E ER LF+EH+ ++ Sbjct: 48 PMNPANIPTPSA-MPPQAYPGGDKAATSTTEKRSAWGEHKAPDGRIYYYNSLTKESSWEKPEDLKSPQEKL---------LSQCPWKEYKSDAGKVYFHNSVTKESRWTKPKEL------------GELEAMIAASAPASSVDSPSNKS-------EPSSAIEQAMQATLASIELPPPPSAAAAATLPVVEAPVEPKKEPMPVAEKEEPPKKEQYIFRNKKEAIEAFKCLLKEKEVPSTASWESAMKLIINDPRYGALKHLNEKKQAFNEYKTQRAKEEKEEQRLRAKQAKEDLEQFLLHNDRMNSSIKYWKADTMFGEDEAWKS--VSERERRDLFDDVVHLIAKKEKEEAKVLRKRNIKVFTEIL--------------------DNMPNLTFTTTWSEAQQMLLDNPRFTEDPDLENMDKE-DALVCFEDHIRLLEQENDDEKERERRRLKRNQRKNRESFIVLLDELHHQGKLNSMSLWMDLFPVISQDMRFGSMLGQPGSTPLDLFKFYVEDLKSRFHDEKKVVKEILKEKGFFIEISTTYESFSNAIL------------------------SDKRSSNLDSGN--------IKLTY-------NSLLEKAEAREKERLKDEARRLKKLESAFKNLLSKH---NIDLDTKWDHIRPKLEGEQAFESITLEAERIRLFKEHLIAIE 644
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|970900250|ref|XP_015115828.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A [Diachasma alloeum] >gi|970900252|ref|XP_015115829.1| PREDICTED: pre-mRNA-processing factor 40 homolog A [Diachasma alloeum]) HSP 1 Score: 203.371 bits (516), Expect = 9.116e-51 Identity = 188/652 (28.83%), Postives = 293/652 (44.94%), Query Frame = 0 Query: 9 PPRGMHGGPP-----PMNHPPPMMMGGPG------------------GFPPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPA----------------VPLP---PAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSD--GKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQQKAAVET--IEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVV--LKAAVKPEPPDE------------RDGPP----SFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRL----NQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAI 591 P + G PP P + PPMM GP PPPG+G P GPP ++ P I AP LP LPP ++PA P+P P E ++WTEH DG+TYY+N TK S ++KP L+ P + L C WKEY + GK YY + KES W P EL+ K ++ AAA+ +A T I L +S VG + +G +A + +AA + + P PDE R P F +EA+ AFK++L ++ V S A W KM+S P + ++K E+KQAF Y+T+R+KEEKE +R R ++A++ + L ++ S ++ + EE+ +K+ + D+ D++ D + LAK+EKEE +L N K A +L ++ +W+E Q++L + E+ L E+ +E D FE+ + +LE E+K E++ R++ E R F +L+ L E G + S W L P++ + + M+GQ G T +LF+ +V+DLK R+ ++K+ +R+ L EV E + + Sbjct: 8 PSPAVPGYPPAAPNMPPGYGPPMMGSGPFIPPPGMPPGPPGMMPPQFSIPPPGFGY---PMGAGGPPEPGVIAAPPQITAP--ALPTLPPTDTSSPAPNPSPHPLTNPSTPTPAPVPSTSPIEKKSDWTEHKAPDGRTYYYNSTTKQSLWEKPDELKTPSELL---------LSQCPWKEYKSENGKVYYHNVTSKESRWTIPPELEELKNR----------ILAEEAAAAAAVAVASATNTGGISQLIQHSSPNVVG-TPESTNSGKSAIEQAMAATLAAINIPTPPAKPDEDSNSAKGSANGSRTSTPEPKVQFKDKKEAIEAFKELLKERDVPSNATWEQAVKMISSDPRYPSMKKLNERKQAFNAYKTQRLKEEKETERLRLKKAKEDLEQFLLNHERMTSTVKYYKCEEIYANLEIWKA--VGDSDRRDIYEDVIFNLAKREKEEMKLLKKRNTKKLAQVLDTMTDVT--------------------YRTTWQETQSLLLQHSAFAEDADLLEMDKE-DALLVFENHIRQLEKDEEEEKEREKKRRKRQERKNRDGFISLLDELHEQGKLTSMSLWVELYPMLSADLRFSAMLGQPGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEAFATVV 611
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|551498379|ref|XP_005800742.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Xiphophorus maculatus]) HSP 1 Score: 201.83 bits (512), Expect = 3.561e-50 Identity = 188/621 (30.27%), Postives = 286/621 (46.05%), Query Frame = 0 Query: 16 GPPPMNHPPPMMMGGPGGFPPPGY-------------GMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPL------------PPAEDP---ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYY--SDGKESLWEEPAELKAHKAEQAALDAGEVEVVV--GSAAASLQAQQKAA-------VETIEILDDGASDEEVGKAGRAGTNGVAAAKSGLAAVVLKAAVKP-------EPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSAL-KTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEE----KRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAG--AEVTAEWD 583 G PPM PP M P G PPG M+PP PG +LPP + P + P PP + T A P E P + WTEH DGKTYY+N TK ST++KP L+ P + L C WKEY + GK YY S KES W +P EL+ +A A ++G E +AA ++QA + A VET ++ + +V A V A + + V+ A KP E P+ + + T EEA AFK++L +KGVSS + W K++ P +SAL K EKKQAF Y+ + KEEKEE R + + +++ F + L ++ S +R+++AE++ E + S + D+ +++ D + LAKKEKE+ ++ N +A +L A ++ +W EAQ L E+ L+ + +E D FE+ + LE E K+ R+ + R +F++ L+ L + G + S W + P + + + M+GQ G T +LF+ +V+DLK RY ++KR ++D L G EV +D Sbjct: 14 GIPPMGQRPPSMTPLPPGIMPPGIMPPMAAPPMGQMPSMIPPMIPGM------MLPP----RIPAATIQPTGPPGVDTTAPAAAAPGTTNATNGSPSEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQM---------LSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTETAAPGTTAAPTVQADKNTATMATVKEVETAVVVPE-EQQSQVTAHQTAEVKAVEAPVTSSESAVI-AESKPSVEVKEEERPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKEKFQRFLENHEKMTSTTRYKKAEQMFNELEVW--SCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVT--------------------YRTTWSEAQQYLLDNPTFAEDEELQNMDKE-DALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLDELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFLVEVNTSFD 590
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|617456109|ref|XP_007570339.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A [Poecilia formosa] >gi|961876476|ref|XP_014896634.1| PREDICTED: pre-mRNA-processing factor 40 homolog A-like [Poecilia latipinna]) HSP 1 Score: 199.904 bits (507), Expect = 1.632e-49 Identity = 190/622 (30.55%), Postives = 290/622 (46.62%), Query Frame = 0 Query: 16 GPPPMNHPPPMMMGGPGGFPPPGY-------------GMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPL-------------PPAEDP---ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYY--SDGKESLWEEPAELKAHKAEQAALDAGEVEVVVGSAAASLQAQ---QKAAVETIEILDDGAS--DEEVGKAGRAGTNGVAAAKSGL----AAVVLKAAVKP-------EPPDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSAL-KTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEE----KRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAG--AEVTAEWD 583 G PPM PP M P G PPG M+PP PG +LPP + P + P PP + T VP PP E P + WTEH DGKTYY+N TK ST++KP L+ P + L C WKEY + GK YY S KES W +P EL+ +A A ++G E A+ AQ A+ T++ + A+ +E+ + T V A ++ + +AVV A KP E P+ + + T EEA AFK++L +KGVSS + W K++ P +SAL K EKKQAF Y+ + KEEKEE R + + +++ F + L ++ S +R+++AE++ E + S + D+ +++ D + LAKKEKE+ ++ N +A +L A ++ +W EAQ L E+ L+ + +E D FE+ + LE E K+ R+ + R +F++ L+ L + G + S W + P + + + M+GQ G T +LF+ +V+DLK RY ++KR ++D L G EV +D Sbjct: 42 GIPPMAQRPPSMTPLPPGIMPPGIMPPMAAPPMGQMPSMIPPMIPGM------MLPP----RIPAATVQPTGPPGVDT-TVPAAAAPGTTSGTNGSPPEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQM---------LSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTTEAAAPGTTAAPTAQADQNTTAMVTVKEAETAAAVPEEQQSQVTSHQTAEVKAVEAPVTSSESAVV--AESKPSVEVKEEERPELQKKTYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKEKFQRFLENHEKMTSTTRYKKAEQMFNELEVW--SCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVT--------------------YRTTWSEAQQYLLDNPTFAEDEELQNMDKE-DALICFEEHIRALEKEEEEDKQKTLLRERRRQRKNRESFQKFLDELHDHGQLHSMSSWMEMYPTLSSDMRFSSMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFLVEVNTSFD 618
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|1041112805|ref|XP_017279880.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A isoform X2 [Kryptolebias marmoratus]) HSP 1 Score: 199.519 bits (506), Expect = 2.596e-49 Identity = 175/552 (31.70%), Postives = 271/552 (49.09%), Query Frame = 0 Query: 66 PMGGLPPLPPP-VMATPAVP--------LPPAEDP---ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYY--SDGKESLWEEPAELKAHKAEQAALDAGEVEVVV--GSAAASLQAQQKAAVETIEILDDGA---SDEEVGKAGRAGTNGVAAAK----SGLAAVVLKAAVKPEPPDERDGPPS----FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSAL-KTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEE----KRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAG--AEVTAEWD 583 P + P PP V T A P P E P + WTEH DGKTYY+N TK ST++KP L+ P + L C WKEY + GK YY S KES W +P EL+ +A A + G EVV +AA ++QA A + T+ ++ A S+E +A T V AA+ S +AVV ++ E +ER P + T EEA AFK++L +KGV+S + W K++ P +SAL K EKKQAF Y+ + KEEKEE R + + +++ F + L ++ S +R+++AE++ E + S + D+ +++ D + LAKKEKE+ ++ N +A +L A ++ +W EAQ L E+ L+ + +E D FE+ + LE E+K+ R+ + R +F++ L+ L + G + S W + P + + + M+GQ G T +LF+ +V+DLK RY ++KR ++D L G EV +D Sbjct: 109 PAAAVQPTGPPGVDTTTAAPGTTSTTNGSPQEEQPKKKSVWTEHKSLDGKTYYYNTETKQSTWEKPDELKSPAEQL---------LSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTTEVVAPGTTAAPAVQADNTATMATVMEVETAAAVVSEEPQSQATMNQTAEVKAAEAPVTSSESAVVTESTASVEVKEERLEPVKKTYKWNTKEEAKQAFKELLKEKGVASNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFNELEVW--SCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVT--------------------YRTTWSEAQQYLLDNPTFAEDEELQNMDKE-DALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQKFLDELHDHGQLHSMSSWMEMYPTLSSDMRFANMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFSVEVNTSFD 628
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|524891430|ref|XP_005102248.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A-like isoform X3 [Aplysia californica]) HSP 1 Score: 197.978 bits (502), Expect = 4.542e-49 Identity = 202/715 (28.25%), Postives = 330/715 (46.15%), Query Frame = 0 Query: 35 PPPGYGMLPPPRPGFGPPGSALLPPPTVIQAPMGGLPPLPPPVMATPAVPLPPAEDPANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYYSDG--KESLWEEPAELKAHKAEQAALDAGEVEVVVGSA--AASLQAQQKAAVETIEILDDGASDEEVGKAGRAGT--NGVAAAKSGLAAVVLKAAVKPE----PPDERDGPPS-----FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALK-TGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRL----NQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEEREKSEEEEEEEDSGAGSRGLESGRRTSRRLQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPE-ERKALFEEHMAMLQ 728 PPG + P P P SA +PP QA GG E + W EH DG+ YY+N +TK S+++KP L+ P++ L C WKEY + GK Y+ + KES W +P EL GE+E ++ ++ A+S+ + + + ++ E+ +A A +A + V++A V+P+ P E++ PP F +EA+ AFK +L +K V STA W K++ P + ALK EKKQAF EY+T+R KEEKEE+R RA++A++ + L +++S ++ +A+ + ED +KS ++ ++ D+F D V +AKKEKEE ++ N K F +L + P L +W EAQ +L R E+ L + +E D FED + LE + ++K ER ++ + R +F +L+ L G ++ S W L PVI ++ + M+GQ G T +LF+ +V+DLK R+ ++K+ +++ L G + E++ NAIL S S L+SG K + + E+ R E ++EARR +K +++LL ++ + +D W + LE A+ + E ER LF+EH+ ++ Sbjct: 29 MPPGMDPVFPMNPANIPTPSA-MPP----QAYPGG-----------DKAATSTTEKRSAWGEHKAPDGRIYYYNSLTKESSWEKPEDLKSPQEKL---------LSQCPWKEYKSDAGKVYFHNSVTKESRWTKPKEL------------GELEAMIAASAPASSVDSPSNKS-------EPSSAIEQAMQATLASIELPPPPSAAAAATLPVVEAPVEPKKEPMPVAEKEEPPKKEQYIFRNKKEAIEAFKCLLKEKEVPSTASWESAMKLIINDPRYGALKHLNEKKQAFNEYKTQRAKEEKEEQRLRAKQAKEDLEQFLLHNDRMNSSIKYWKADTMFGEDEAWKS--VSERERRDLFDDVVHLIAKKEKEEAKVLRKRNIKVFTEIL--------------------DNMPNLTFTTTWSEAQQMLLDNPRFTEDPDLENMDKE-DALVCFEDHIRLLEQENDDEKERERRRLKRNQRKNRESFIVLLDELHHQGKLNSMSLWMDLFPVISQDMRFGSMLGQPGSTPLDLFKFYVEDLKSRFHDEKKVVKEILKEKGFFIEISTTYESFSNAIL------------------------SDKRSSNLDSGN--------IKLTY-------NSLLEKAEAREKERLKDEARRLKKLESAFKNLLSKH---NIDLDTKWDHIRPKLEGEQAFESITLEAERIRLFKEHLIAIE 634
BLAST of EWM22405.1 vs. NCBI_GenBank
Match: gi|1007767248|ref|XP_015822124.1| (PREDICTED: pre-mRNA-processing factor 40 homolog A [Nothobranchius furzeri]) HSP 1 Score: 197.208 bits (500), Expect = 1.311e-48 Identity = 185/609 (30.38%), Postives = 283/609 (46.47%), Query Frame = 0 Query: 16 GPPPMNHPPPMMMGGPGGFPPPGYGMLPPPRPGFG----PPGSALLPPPTVIQAPMGGLPPLPPP-VMATPAVP--------LPPAEDP---ANWTEHAGQDGKTYYHNRVTKISTYDKPACLEPPRKPAPVPPGPPPSLPPCKWKEYTTPEGKTYY--SDGKESLWEEPAELKAHKAEQAALDAGEVEVVV--GSAAASLQAQQKAAVETI-----EILDDGASDEEVGKAGRAGTNGVAAA----KSGLAAVVLKAAVKPEP-----PDERDGPPSFGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSAL-KTGEKKQAFAEYQTKRMKEEKEEKRARARRARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEE----KRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAG--AEVTAEWD 583 G PPM PP M P G PPG M P P G + + P + P PP V +T A P P E P + WTEH D KTYY+N TK ST++KP L+ P + L C WKEY + GK YY S KES W +P EL+ +A A + G E VV +AA ++QA+ A++ T+ S+E + T V A S +AVV ++ E P+ + + T EEA AFK++L +KGV+S + W K++ P +SAL K EKKQAF Y+ + KEEKEE R + + +++ F + L ++ S +R+++AE++ E + S + D+ +++ D + LAKKEKE+ ++ N +A +L A ++ +W EAQ L E+ L+ + +E D FE+ + LE E+K+ R+ + R +F++ L+ L + G + S W + P + + M+GQ G T +LF+ +V+DLK RY ++KR ++D L G EV +D Sbjct: 41 GIPPMAQRPPSMTPLPPGIMPPGI-MPPMAAPPMGQMAGMMPPMMPGMMIPPRIPAASVQPTGPPGVDSTAAAPGTTSTANGSPQEEQPKKKSVWTEHKSLDRKTYYYNTETKQSTWEKPDELKSPAEQL---------LSKCPWKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTTETVVPGTTAAPAVQAETTASMATVMEVETAAATAAVSEEPPSQVTVNQTAEVKAVDAPVTSSESAVVTESTASVEVKEEERPELQKKTYKWNTKEEAKQAFKELLKEKGVASNSSWEQAMKLIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENNEKMTSTTRYKKAEQMFSELEVW--SCVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVT--------------------YRTTWSEAQQYLLDNPTFAEDEELQNMDKE-DALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRESFQKFLDELHDHGQLHSMSSWMEMYPALSSNMRFASMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGFSVEVNTSFD 616 The following BLAST results are available for this feature:
BLAST of EWM22405.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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