EWM22445.1, cds8223 (CDS) Nannochloropsis gaditana

Overview
NameEWM22445.1
Unique Namecds8223
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:174297..178094 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22445.1
Productputative atp-dependent rna helicase dhx36
Orig transcript idgnl|cribi|Naga_100011g57.3445.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:174297..178094 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0008026ATP-dependent helicase activity
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0004386helicase activity
Vocabulary: INTERPRO
TermDefinition
IPR002464DNA/RNA_helicase_DEAH_CS
IPR011709DUF1605
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR007502Helicase-assoc_dom
IPR001650Helicase_C
Homology
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|585102951|gb|EWM22445.1| (putative atp-dependent rna helicase dhx36 [Nannochloropsis gaditana])

HSP 1 Score: 2584.29 bits (6697), Expect = 0.000e+0
Identity = 1265/1265 (100.00%), Postives = 1265/1265 (100.00%), Query Frame = 0
Query:    1 MARRQQEGKRGSRRGGGRGSTPGSRSGHRDDSGGLNTDSPRARSVTVRAKKLLLHDDCKKHILDLIHQLREQERDDDISPDGCTETRIKAPRRDRSSGMPRGSQTELMLKGGCDSSLEALEQALMEAGVGDGDAPSSEEEDLGESRVFAAMANMMARTKLSAVADDDSSEEGSESHSEDSLDEDEESSGSEDEGRAIQTSLSRQEQEVLLKRLIKSAREEYVANEVEAATNAEHDCALKSRNRTLSKKVRLTLCNENGGRKVVVLERRKDLKGLFDAAKNKLKIKKPMHAILQSGENLGNTLLVGDGAVVVVKGKEGKGLPPRALPPVPAQKMDEQKRLEARESAERKEIEKVKETMASLAAVKKAYLKRNELDLKSEEGRGKLTESRERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQPDSNFISRFQPVVRTLRRVLWLEAV 1265
            MARRQQEGKRGSRRGGGRGSTPGSRSGHRDDSGGLNTDSPRARSVTVRAKKLLLHDDCKKHILDLIHQLREQERDDDISPDGCTETRIKAPRRDRSSGMPRGSQTELMLKGGCDSSLEALEQALMEAGVGDGDAPSSEEEDLGESRVFAAMANMMARTKLSAVADDDSSEEGSESHSEDSLDEDEESSGSEDEGRAIQTSLSRQEQEVLLKRLIKSAREEYVANEVEAATNAEHDCALKSRNRTLSKKVRLTLCNENGGRKVVVLERRKDLKGLFDAAKNKLKIKKPMHAILQSGENLGNTLLVGDGAVVVVKGKEGKGLPPRALPPVPAQKMDEQKRLEARESAERKEIEKVKETMASLAAVKKAYLKRNELDLKSEEGRGKLTESRERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQPDSNFISRFQPVVRTLRRVLWLEAV
Sbjct:    1 MARRQQEGKRGSRRGGGRGSTPGSRSGHRDDSGGLNTDSPRARSVTVRAKKLLLHDDCKKHILDLIHQLREQERDDDISPDGCTETRIKAPRRDRSSGMPRGSQTELMLKGGCDSSLEALEQALMEAGVGDGDAPSSEEEDLGESRVFAAMANMMARTKLSAVADDDSSEEGSESHSEDSLDEDEESSGSEDEGRAIQTSLSRQEQEVLLKRLIKSAREEYVANEVEAATNAEHDCALKSRNRTLSKKVRLTLCNENGGRKVVVLERRKDLKGLFDAAKNKLKIKKPMHAILQSGENLGNTLLVGDGAVVVVKGKEGKGLPPRALPPVPAQKMDEQKRLEARESAERKEIEKVKETMASLAAVKKAYLKRNELDLKSEEGRGKLTESRERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQPDSNFISRFQPVVRTLRRVLWLEAV 1265          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|585109898|gb|EWM27628.1| (atp-dependent rna helicase dhx57 [Nannochloropsis gaditana])

HSP 1 Score: 575.474 bits (1482), Expect = 1.928e-180
Identity = 352/869 (40.51%), Postives = 493/869 (56.73%), Query Frame = 0
Query:  223 ANEVEAATNAEHDCALKSRNRTLSKKVRLTLC---NENGGRKVVVLERRKDLKGLFDAAKNKLKIKKPMHA-ILQSGENLGNTLLVGDGAVVVVKGKEGKGLPPRALPPVPAQKMDEQKRLEARESAERKEIEKVKETMAS-----LAAVKKAYL-----------KRNELDLKSEEGRGKLTESR-ERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVE-ELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGF 1069
            A +  AA   +    L +R R  S +V++ +C   +    +K VV+ R  +L  LF+AA++ L IK+P  A +L++G  L +T+ V    V+ V  K    +P  A  P+P           A  +A R+E+E+ K   A+     L  +K+ Y            KR+E      E   ++ + R ER  E+    E+L  +E               LP +S RE ++  V  + V+V+ G TGSGK+TQ+PQF+LD +   G+G + NI+ TQPRRISAI + ERVA ER  +VG  VGYS+R   R S  T L F TTG+LLRRL  D DL GVSHV++DEVHER + SDFLLI++++LL  R  LK++LMSATLQA LF  YF N P +H+PGR F V  ++L+D+E +L + +  PG  +     +  G     G   RG   R +             +  +  G G E  +G  G   +                 +P     IDY+LI KL   LV    + ++ + GGAVL+F  G  EI    + M   A+L + KR   + LHSS+P++AQRA+FR+M  GV KIVVATNIAETSIT+ D++ VID+GR K+  YD  THM+SL  VWTSQA+A QRAGRAGRVR G C+RLY++SFM+  M  +  PE+ R  LE L LTIL LELG P  FL RA+EPP P+A+  +++ L +I+A+     L     +  L PLGFHLA+LP D R+GKML+  S+  C++PILTIAA  S +SPF  P G ++EA  A  ++    SDH+A +  +  W  +++     RK +   NF+SIA LE+I+A R +L   L+  GF
Sbjct:  147 ATKKSAAVRQKEAQRLATRGR--SSRVQVIICAWHHPETTQKRVVVGRVPNLTTLFEAARDTLFIKRPKAAFVLETGLYLSDTMAVEQDTVICVTTK----VPEAAGVPLPGGGGLVLPLTPAERAARREEMEQSKAAAAAADQQKLEDIKEGYRVRAIRRAAGGKKRHERSPAESEALSRMLKQRLERVMETRGYREMLWARE--------------RLPIWSMREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILVTQPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGLLLRRLQEDPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLILMSATLQADLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKSVPGMSQGGVGGNGRGGGGRGGGRGRGLGGRGNGGGRGLGKEHRQLSNGSLKGIGNENGNGVAGPPLI-----------------SPKAEDPIDYQLIVKLLTLLV-TIREADDNEVGGAVLVFFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTSQAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSLTILALELGSPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSDHIAALEAYNGWAELRNEPYRVRKDYCTENFLSIATLEQIEALRKELRRQLIDIGF 977          

HSP 2 Score: 131.339 bits (329), Expect = 4.514e-27
Identity = 63/172 (36.63%), Postives = 106/172 (61.63%), Query Frame = 0
Query: 1095 DKRLLRCILLCGLTPQIAKLVRPTR-GRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGI-ASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP----DSNFISRFQPVVRTLRRVL 1260
            D  L+RC L   L PQ+ KLVRP + G GA F  +D T  VA+HP S+N  R+      G +A  +YH+K+++++ Y +D +FVSP ++LLFG +I+ + EHG +   + + +T+D+WLSF+    ++VLV   +  L+  L +K + P    +    ++ Q VV++++R+L
Sbjct: 1063 DVNLIRCCLFAALYPQVGKLVRPQKTGEGATFELRDKT-KVAVHPGSINFTRLMNLAPSGKDAFLLYHKKVQSTKIYAYDSTFVSPFTILLFGGDIKIQWEHGSLEGDQSIAVTMDNWLSFRMTASSAVLVKYIRHELNQLLLEKFSDPVQAMEEKRKAKAQAVVQSIKRLL 1233          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|553182710|ref|XP_005853770.1| (helicase domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422295292|gb|EKU22591.1| helicase domain-containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 550.436 bits (1417), Expect = 9.043e-177
Identity = 312/728 (42.86%), Postives = 433/728 (59.48%), Query Frame = 0
Query:  346 ERKEIEKVKETMASLAAVKKAY--LKRNELDLKSEEGRGKLTESR-ERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVE-ELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGF 1069
            +++++E +KE    + A+++A    KR+E      E   ++ + R ER  E+    E+L  +E               LP +S RE ++  V  + V+V+ G TGSGK+TQ+PQF+LD +   G+G + NI+ TQPRRISAI + ERVA ER  +VG  VGYS+R   R S  T L F TTG+LLRRL  D DL GVSHV++DEVHER + SDFLLI++++LL  R  LK++LMSATLQA LF  YF N P +H+PGR F V  ++L+D+E +L + +  PG  +     +  G     G   RG   R +             +  +  G G E  +G  G   +                 +P     IDY+LI KL   LV    + ++ + GGAVL+F  G  EI    + M   A+L + KR   + LHSS+P++AQRA+FR+M  GV KIVVATNIAETSIT+ D++ VID+GR K+  YD  THM+SL  VWTSQA+A QRAGRAGRVR G C+RLY++SFM+  M  +  PE+ R  LE L LTIL LELG P  FL RA+EPP P+A+  +++ L +I+A+     L     +  L PLGFHLA+LP D R+GKML+  S+  C++PILTIAA  S +SPF  P G ++EA  A  ++    SDH+A +  +  W  +++     RK +   NF+SIA LE+I+A R +L   L+  GF
Sbjct:   56 DQQKLEDIKEGY-RVRAIRRAAGGKKRHERSPAESEALSRMLKQRLERVMETRGYREMLWARE--------------RLPIWSMREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILVTQPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGLLLRRLQEDPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLILMSATLQADLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKSVPGMSQGGVGGNGRGGGGRGGGRGRGLGGRGNGGGRGLGKEHRQLSNGSLKGIGNENGNGVAGPPLI-----------------SPKAEDPIDYQLIVKLLTLLV-TIREADDNEVGGAVLVFFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTSQAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSLTILALELGSPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSDHIAALEAYNGWAELRNEPYRVRKDYCTENFLSIATLEQIEALRKELRRQLIDIGF 750          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|884978417|ref|XP_012996175.1| (PREDICTED: ATP-dependent RNA helicase DHX36 [Esox lucius])

HSP 1 Score: 555.829 bits (1431), Expect = 4.281e-175
Identity = 335/861 (38.91%), Postives = 489/861 (56.79%), Query Frame = 0
Query:  388 RERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGE--TVGYSVRFNTRRS-PQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIER-SIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAED-KSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRP--TRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP 1241
            RE A +  +L   L++K   SKY     + R  LP+F ++E ++E + ++QV+VV GETG GKTTQ+ QFILDD+  RG G  C +VCTQPRRISAI VAERVA ER E+VG+  + GY +R  +R    Q  +L+CTTG++L+ L     L+ +SH+++DE+HER L SD LLI++KDLL  R +LKV+LMSATL A  FS YFDN P +HIPG  F V +  L+DV E++       RP+   R         R R  RG M  ++S P                 + E  E       TL++ +       L M      D   ID EL+ +L R +V      +EE+  GA+L+FLPG   I   +   M Q    SD  R  I  LHS MPT  Q ++F++   GV KIV+ATNIAETSIT+ DV  VID G+ K+T +D   +++++   W S A+AKQR GRAGRV PG CY LY  S     M  +  PEI R  LE L L I +L+LGP   FL++A++PP+ +A+  ++  L+D+ A+          R+  L PLGFHLA LPV+  +GK+++F +L  C+DP+LTIAA+ S + PF  P+GK + A + ++  + D KSDHL +V  +  W+  K       + F  +NF+S   L+ +   + +  + L+  GF          ++K+ +  + + N  +++L++ +++ GL P++A +++P  ++ R     TK     V IHP SVNA+ I       N +  +YH KMRTS  +L+D + VSP S+L FG +I  + +   IA       VD+W+ F++    + LV   KK LD+ L +KI  P
Sbjct:  209 RENALDQ-QLKRDLERKRADSKYL-EMLKFREKLPSFGKKEELVEVIRSNQVLVVSGETGCGKTTQVTQFILDDYIDRGMGSLCRVVCTQPRRISAISVAERVAAERAERVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRHDLKVILMSATLNAEKFSRYFDNCPMIHIPGMTFPVQEFLLEDVVEMLR-----YRPQKQER---------RPRWKRGFMQAQNSRP------------EKEQKEAEYKESWPCYARTLRDRYSDSTIEVLEMM----DDDDKIDLELVVQLIRHIV-----LSEEE--GAILVFLPGWDNISSLNDLLMTQQMFKSD--RFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSLANAKQRRGRAGRVCPGKCYHLYN-SLRASLMEAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAITLAITHLMDLNAL---------ERSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKVADMRRRTLSRDSKSDHLTIVNAFCGWEEAKLRSNQVEREFCWSNFLSANTLQMLHNMKGQFAEHLLGAGFI---------SSKNPKDPEANFNSENEKLIKAVIVAGLYPKVA-MIKPSGSKKRPVRVYTKTDG-KVCIHPKSVNAEEIQ-----FNYSWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQTDEETIA-------VDEWIVFQSPARIANLVKSLKKELDSLLEEKIRNP 995          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1207194696|ref|XP_001921063.3| (putative ATP-dependent RNA helicase DHX57 isoform X1 [Danio rerio])

HSP 1 Score: 564.688 bits (1454), Expect = 1.943e-174
Identity = 344/890 (38.65%), Postives = 499/890 (56.07%), Query Frame = 0
Query:  393 ESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGEC-NIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRP-RAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTA-RNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKK--RACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELG---PPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAP-------CATAESQSATKSLQAIDYDSNEN--DKRLLRCILLCGLTPQIAKLVRPTR-----GRGA----------HFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLF-GSNIRTRREHGGIASKVVNITVDD-WLSF-KTKEETSVLVTVFKKHLDACLTQKITQPDSNFIS 1247
            E+ +L    ++K  S +Y  S  EQR  LPA+ +REAILE +  +QV+V+ G TG GKTTQ+PQFILD++   G+     NI+CTQPRRISAI VA RVA+ER E +G + GY +R  T RS  TRL+FCTTGVLLRRL  D +L+GV+HV+VDEVHERT ESDFLL+VLKDL+  R +LKV++MSATL A LFS YF+N PC+HIPGR F V Q +L+D           G P R + + +R+      G   + G  R   E  D +    S T+ RN     +   D Q   + L   +       ++   +   D++ +D      L   L+E   D +     GAVL+FLPGL+EI++    ++ + + ++++  R  ++ LHSS+  E Q+A+F + + GV KI+++TNIAETS+T+ DV +VID+GR K+  YD    M SL +VW S+A+A QR GRAGRV  G+C+ L+T    + +++    PEI+RV LE L L + +LE+    P ++   + +EPP+  +++A+ Q L      ALG      S    L PLG+HLA LPVD R+GK+++  ++F C+DP LTIAA+ + +SPFV+P  KREEA   K  F+   SDHLAL+  +K W         A   + + NF+SI  L+EI   + +  + L   GF              S+ +   L+A  Y++N N  + +L+  +L   L P + ++  P        +GA           F+TK     V IHPSSVN      +    +    VYH K++TSR ++ D S V    ++LF G  +    + G        I++DD W+ F     E + LV   +  LD  L +KI  P  + IS
Sbjct:  556 ENKKLCREFKRKRSSRRYI-SMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSTKLNRSS-----GPGGKTGKGRALVEDFDDDYGGWSFTSFRNKESVKDSVPDQQLSQQDLTVRYSNYSKSVVKTLAAMDLDKINMD------LVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRL-----CALGALTDEES----LTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLGFSLANSDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKMSSKGSDGVLEATGYEANLNSDNTKLMSAMLCAALYPNVVQVRSPQMKYKLTSKGAMKMQPKAEEQRFMTKSDGA-VHIHPSSVNF-----SVRHYDSPYLVYHEKVKTSRVFIRDCSMVCVYPMVLFGGGQVNVELQRGQFI-----ISLDDGWIKFAAASHEVAELVKELRWELDQLLEEKIKNPSMDLIS 1413          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1207114885|ref|XP_021336395.1| (putative ATP-dependent RNA helicase DHX57 isoform X1 [Danio rerio])

HSP 1 Score: 562.762 bits (1449), Expect = 8.318e-174
Identity = 344/890 (38.65%), Postives = 498/890 (55.96%), Query Frame = 0
Query:  393 ESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGEC-NIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRP-RAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTA-RNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKK--RACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELG---PPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAP-------CATAESQSATKSLQAIDYDSNEN--DKRLLRCILLCGLTPQIAKLVRPTR-----GRGA----------HFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLF-GSNIRTRREHGGIASKVVNITVDD-WLSF-KTKEETSVLVTVFKKHLDACLTQKITQPDSNFIS 1247
            E+ +L    ++K  S +Y  S  EQR  LPA+ +REAILE +  +QV+V+ G TG GKTTQ+PQFILD++   G+     NI+CTQPRRISAI VA RVA+ER E +G + GY +R  T RS  TRL+FCTTGVLLRRL  D +L+GV+HV+VDEVHERT ESDFLL+VLKDL+  R +LKV++MSATL A LFS YF+N PC+HIPGR F V Q +L+D           G P R + + +R+      G     G  R   E  D +    S T+ RN     +   D Q   + L   +       ++   +   D++ +D      L   L+E   D +     GAVL+FLPGL+EI++    ++ + + ++++  R  ++ LHSS+  E Q+A+F + + GV KI+++TNIAETS+T+ DV +VID+GR K+  YD    M SL +VW S+A+A QR GRAGRV  G+C+ L+T    + +++    PEI+RV LE L L + +LE+    P ++   + +EPP+  +++A+ Q L      ALG      S    L PLG+HLA LPVD R+GK+++  ++F C+DP LTIAA+ + +SPFV+P  KREEA   K  F+   SDHLAL+  +K W         A   + + NF+SI  L+EI   + +  + L   GF              S+ +   L+A  Y++N N  + +L+  +L   L P + ++  P        +GA           F+TK     V IHPSSVN      +    +    VYH K++TSR ++ D S V    ++LF G  +    + G        I++DD W+ F     E + LV   +  LD  L +KI  P  + IS
Sbjct:  555 ENKKLCREFKRKRSSRRYI-SMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSTKLNRSS-----GPGGTTGKGRALVEDFDDDYGGWSFTSFRNKESVKDSVPDQQLSQQDLTVRYSNYSKSVVKTLAAMDLDKINMD------LVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRL-----CALGALTDEES----LTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKMSSKGSDGVLEATGYEANLNSDNTKLMSAMLCAALYPNVVQVRSPQMKYKLTSKGAMKMQPKAEEQRFMTKSDGA-VHIHPSSVNF-----SVRHYDSPYLVYHEKVKTSRVFIRDCSMVCVYPMVLFGGGQVNVELQRGQFI-----ISLDDGWIKFAAASHEVAELVKELRWELDQLLEEKIKNPSMDLIS 1412          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1207135186|ref|XP_005159264.2| (ATP-dependent RNA helicase DHX36 isoform X1 [Danio rerio])

HSP 1 Score: 549.666 bits (1415), Expect = 4.389e-173
Identity = 329/855 (38.48%), Postives = 485/855 (56.73%), Query Frame = 0
Query:  402 QKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGE--TVGYSVRFNTRRS-PQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSE--PCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDK----KRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYT--ESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAED-KSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGRGAHFITKDPTL---DVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP 1241
            QKKE ++ Y     + R  LP++  RE ++  ++A++V+V+ GETG GKTTQ+ QFILDD+  RG+G  C +VCTQPRRISAI VAERVA ER E VGE  + GY +R  +R    Q  LL+CTTGV+L+ L  D  L+ ++H+++DE+HER+++SD L+ ++KDLL  R +LKVVLMSATL A  FS YF+N P +HIPG  F V++  L+DV EL+  +  P   +  P   +  +H +  R ++G +  K  E  PC          AR                 TL++ F       L M      D   ID EL A L R +  +   +NE    GA+L+FLPG   I     +   D L+SD+     R  I  LHS MPT +Q  +F+K   GV KIV+ATNIAETSIT+ DV +VID G+ K+T +D   ++ ++   W S A+AKQR GRAGRV PG CY LY    + + DN   +  PEI+R  LE L L I +L+LGP   FLQ+ ++PPS +A++ ++  L+D+ A+          R   L PLGFHLA +PV+  +GKM++F +L  C+DP+LTIAA+ S + PF  P+GK + A   ++ F+++ +SDHL++V  +  W+  K   +   + +   NF+S   L+ +   + +  + L++ GF      +  S+         + N  +K+L++ +++ GL P++AK + P+  +      K  T     V IHP SVNA+      +       VYH KM+T+  +L+D + VSP S+L FG NI  +R+          I VD+W+ F++    + LV   KK LD  L +KI  P
Sbjct:  202 QKKEDNAAYI-EMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVELLGFQ--PRYKQRKPHYRKRNNHGSSARPEKGKIEAKYHESWPC---------YAR-----------------TLRDRFSDTTIEVLGMM----DDDDNIDLELTAALIRHIAVN---ENE----GAILVFLPGWDNI-----STLNDLLMSDQMFKSDRFIIIPLHSLMPTVSQTQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDN---YQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNAL---------DRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSDHLSIVNAFLGWEDAKRRGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPKDPSS---------NINSENKKLVKAVIVAGLYPKVAK-ISPSHNKKRPMPVKVYTKADGKVCIHPKSVNAEE-----TQFQYKWLVYHLKMKTTSIFLYDCTEVSPFSLLFFGGNISIQRDQDQDT-----IAVDEWIVFQSPGRIAHLVKDLKKELDVLLEEKIKSP 979          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1025247001|ref|XP_016368095.1| (PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sinocyclocheilus rhinocerous] >gi|1025247003|ref|XP_016368097.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sinocyclocheilus rhinocerous] >gi|1025247007|ref|XP_016368098.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sinocyclocheilus rhinocerous] >gi|1025247011|ref|XP_016368099.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sinocyclocheilus rhinocerous])

HSP 1 Score: 559.296 bits (1440), Expect = 1.656e-172
Identity = 342/889 (38.47%), Postives = 497/889 (55.91%), Query Frame = 0
Query:  393 ESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGEC-NIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRP-RAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKK--RACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELG---PPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAP-------CATAESQSATKSLQAIDYDSNEN--DKRLLRCILLCGLTPQIAKLVRPT-----RGRGA----------HFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLF-GSNIRTRREHGGIASKVVNITVDD-WLSF-KTKEETSVLVTVFKKHLDACLTQKITQPDSNFIS 1247
            E+ +L    ++K+ S +Y  S  EQR  LPA+ +REAILE +  +QV+V+ G TG GKTTQ+PQFILDD+   G+     NI+CTQPRRISAI VA RVA+ER E +G + GY +R  T RS  TRL+FCTTGVLLRRL  D +L+G++HV+VDEVHERT ESDFLL+VLKDL+A R +LK+++MSATL A LFS YF+  P +HIPGR F V Q +L+D           G P R + + +R       G+  R G  R   E  D +    S T ++S    +   D Q   + L   +       ++   +   D++ +D      L   L+E   D +     GAVL+FLPGL+EI++    ++ + + ++++  R  ++ LHSS+  E Q+A+F +   G  KI+++TNIAETS+T+ DV +VID+GR K+  YD    M SL +VW S+A+A QR GRAGRV  G+C+ L+T      +++    PEI+RV LE L L + +LE+    P E+   + +EPP+  +++A+ Q L      ALG      S    L PLG+HLA LPVD R+GK+++  ++F C+DP LTIAA+ + +SPFV+P  KREEA   K  F+   SDHLAL+  +K W       + A   + + NF+SI  L+EI   + +  + L   GF              S+ +   L+A  Y++N N  + +L+  +L   L P + ++  P        +GA           F+TK     V IHPSSVN      +    +    VYH K++TSR +L D S V    ++LF G  +    + G        I++DD W+ F     E + LV   +  +D  L +KI  P  + IS
Sbjct:  559 ENKKLCREFKRKQSSRRYT-SMQEQRQKLPAWQKREAILECLDKNQVLVISGMTGCGKTTQIPQFILDDFLQTGRQDRVPNIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSSTRLMFCTTGVLLRRLEGDSELSGITHVIVDEVHERTEESDFLLLVLKDLIAKRTDLKIMMMSATLNAELFSQYFNKCPSIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSTKQTRPS-----GQGGRAGKGRAPVEDFDDD-RGWSFTKKDSV--KDSVSDQQLSQQELTVRYSNYSKSVVKTLAAMDLDKINMD------LVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPPEGATKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWLSRANALQRKGRAGRVASGVCFHLFTSHRFTHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLESVFSQLIEPPAEGSLEAAKQRL-----CALGALTDKES----LTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLGFSLANSDHLALLQAYKGWWNATQSGSKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKISSKGSDGVLEATGYEANLNSGNTKLMSAMLCAALYPNVVQVRSPQGKYKLTSKGAMKMQPKAEELRFMTKSDGA-VHIHPSSVNF-----SVRHYDSPYLVYHEKVKTSRVFLRDCSMVCVYPMVLFGGGQVSVELQRGEFI-----ISLDDGWIKFAAASHEVAELVKELRWEMDQLLEEKIRNPSMDLIS 1412          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1211329067|ref|XP_021444178.1| (ATP-dependent RNA helicase DHX36 [Oncorhynchus mykiss])

HSP 1 Score: 549.28 bits (1414), Expect = 2.293e-172
Identity = 332/861 (38.56%), Postives = 487/861 (56.56%), Query Frame = 0
Query:  388 RERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGE--TVGYSVRFNTRRS-PQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIE-RSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFA-EDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRP--TRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP 1241
            RE A +  +L   L++K+  SKY     + R  LP+F ++E ++E + + QV+VV GETG GKTTQ+ QFILDD+  RG G  C +VCTQPRRISAI VAERVA ER E VG+  + GY +R  +R    Q  +L+CTTG++L+ L     L+ +SH+++DE+HER L SD LLI++KDLL  R +LKV+LMSATL A  FS YF+N P +HIPG  F V +  L+DV E++  R  P +    PR  R    F +G+  R    +K +E  +  P      AR                 TL++ +       L M      D   ID ELI +L R +V       EE   GA+L+FLPG   I   +   M Q    SD  R  I  LHS MPT  Q ++F++   GV KIV+ATNIAETSIT+ DV  VID G+ K+T +D   +++++   W S A+AKQR GRAGRV PG CY LY        +  +  PEI R  LE L L I +L+LGP   FL++A++PP+ +AV  ++  L+D+ A+          R+  L PLGFHLA LPV+  +GK+++F +L  C+DP+LTIAA+ S + PF  P+GK + A   ++  + E KSDHL ++  +  W+  K       + F   NF+S   L+ +   + +  + L+  GF         +++K+ +  + ++N ++++L++ +++ GL P++A +++P  ++ R     TK     V IHP SVNA+      +  N    +YH KMRTS  +L+D + VSP S+L FG ++  + +          I VDDW+ F++    + LV   KK LD+ L +KI  P
Sbjct:  221 RENALDQ-QLKRDLERKKADSKYL-DMLKFREKLPSFGKKEELVELIRSSQVLVVSGETGCGKTTQVTQFILDDYIERGMGSVCRVVCTQPRRISAISVAERVAAERAESVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAEKFSKYFNNCPMIHIPGMTFPVQEFLLEDVLEMIRYR--PQKKEQRPRWKRG---FMQGQNSRPEKDQKEAEYKESWPC----YAR-----------------TLRDKYSDRTIDVLEMM----DDDDKIDLELIVQLIRHIVL----SQEE---GAILVFLPGWDNISGLNDLLMAQQMFKSD--RFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVCPGKCYHLYN-GLRASLLDAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAVTLAITHLMDLNAL---------DRSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPMGKEKMADFRRRTLSRESKSDHLTIIYAFTGWEEAKRRGYKFEREFCWDNFLSANTLQMLHNMKGQFAEHLLGAGF---------TSSKNPKDPESNTNSDNEKLIKAVIVAGLYPKVA-MIKPSGSKKRPVRVYTKTDG-KVCIHPKSVNAEE-----TQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDVTIQMDQDQ-----ETIAVDDWIVFQSPARIAHLVKNLKKELDSLLEEKIRSP 1009          
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1007731184|ref|XP_015806564.1| (PREDICTED: ATP-dependent RNA helicase DHX36 [Nothobranchius furzeri])

HSP 1 Score: 546.969 bits (1408), Expect = 8.118e-172
Identity = 329/854 (38.52%), Postives = 472/854 (55.27%), Query Frame = 0
Query:  401 LQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGE--TVGYSVRFNTRRSP-QTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSE-----PCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIE-RSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAED-KSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGR---GAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP 1241
            LQ K+   KYK    + R  LP+F ++E ++E + ++ V+VV GETG GKTTQ+ QFILDD   RG G  C +VCTQPRRISAI VAERVA ER E VG   + GY +R  +R    Q  +L+CTTG++L+ L  D  L+ +SH+++DE+HER L+SD LL+++KDLL  R +LKVVLMSATL A  FS YFDN P +HIPG  F V +  L+DV E+        RP+   R       F +GR  R     K  E     PC    L   ++  +ST +  E     DGDE                          ID ELI  L R +V +       +G GA+L+FLPG   I   +   M Q    SD  R  I  LHS MPT  Q  +F++  AGV KIV+ATNIAETSIT+ DV  VID G+ K+T +D   +++++   W S A+AKQR GRAGRV+PG CY LY        +  +  PEI R  LE L L I +L+LG    FL++A++PP+ KAV  +++ L D+ A+              L  LGFHLA LPV+  +GK+++F +L  C+DP+LTIAA+ S + PF  P+GK + A + ++  + + KSDHL +V   K W+  K       + F   NF+S   L+ +   + +  + L+  GF      +  ++         + N ++++L++ +++ GL P++A +++P+  +   G    T+     V IHP SVNA+       + N A  +YH KMRTS  +L+D + VSP S+L FG +I  +++          I VD W+ F++    + LV   KK LD+ L +KI+ P
Sbjct:  221 LQSKKSDWKYK-EMLKFREKLPSFGKKEELVELINSNSVLVVSGETGCGKTTQVTQFILDDHINRGMGSTCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLVIVKDLLRLRSDLKVVLMSATLNAEKFSKYFDNCPMIHIPGLTFPVEEFLLEDVVEMTK-----YRPKNQDRRPTWKRGFWQGRNSRPEKEEKEQEYRESWPCYARTLQGRYS--DSTIEALEM---LDGDE-------------------------KIDLELILTLIRHIVLN-------EGEGAILVFLPGWDNISGLNDLLMAQQMFRSD--RFVIIPLHSLMPTVNQTQVFKRPPAGVRKIVIATNIAETSITIDDVVFVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYN-GLRASLLDAYQLPEIMRTPLEELCLQIKILKLGFISQFLEKALDPPTEKAVNLAIKSLTDLNAL---------DHTEGLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRRVLSRNSKSDHLTIVNAVKGWEEAKQRGVRYERDFCWDNFLSANTLQMLHNMKGQFAEHLMHAGFVSSGDPKDPAS---------NVNSDNEKLIKAVIVAGLYPKVA-MIKPSHSKKRPGVKVYTQADG-KVCIHPKSVNAEE-----KEFNYAWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDISIQKDEDQ-----ETIAVDQWIVFRSPARIAHLVKSLKKELDSLLEEKISNP 998          
The following BLAST results are available for this feature:
BLAST of EWM22445.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102951|gb|EWM22445.1|0.000e+0100.00putative atp-dependent rna helicase dhx36 [Nannoch... [more]
gi|585109898|gb|EWM27628.1|1.928e-18040.51atp-dependent rna helicase dhx57 [Nannochloropsis ... [more]
gi|553182710|ref|XP_005853770.1|9.043e-17742.86helicase domain-containing protein [Nannochloropsi... [more]
gi|884978417|ref|XP_012996175.1|4.281e-17538.91PREDICTED: ATP-dependent RNA helicase DHX36 [Esox ... [more]
gi|1207194696|ref|XP_001921063.3|1.943e-17438.65putative ATP-dependent RNA helicase DHX57 isoform ... [more]
gi|1207114885|ref|XP_021336395.1|8.318e-17438.65putative ATP-dependent RNA helicase DHX57 isoform ... [more]
gi|1207135186|ref|XP_005159264.2|4.389e-17338.48ATP-dependent RNA helicase DHX36 isoform X1 [Danio... [more]
gi|1025247001|ref|XP_016368095.1|1.656e-17238.47PREDICTED: putative ATP-dependent RNA helicase DHX... [more]
gi|1211329067|ref|XP_021444178.1|2.293e-17238.56ATP-dependent RNA helicase DHX36 [Oncorhynchus myk... [more]
gi|1007731184|ref|XP_015806564.1|8.118e-17238.52PREDICTED: ATP-dependent RNA helicase DHX36 [Notho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8247rna8247Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications