EWM22445.1, cds8223 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|585102951|gb|EWM22445.1| (putative atp-dependent rna helicase dhx36 [Nannochloropsis gaditana]) HSP 1 Score: 2584.29 bits (6697), Expect = 0.000e+0 Identity = 1265/1265 (100.00%), Postives = 1265/1265 (100.00%), Query Frame = 0 Query: 1 MARRQQEGKRGSRRGGGRGSTPGSRSGHRDDSGGLNTDSPRARSVTVRAKKLLLHDDCKKHILDLIHQLREQERDDDISPDGCTETRIKAPRRDRSSGMPRGSQTELMLKGGCDSSLEALEQALMEAGVGDGDAPSSEEEDLGESRVFAAMANMMARTKLSAVADDDSSEEGSESHSEDSLDEDEESSGSEDEGRAIQTSLSRQEQEVLLKRLIKSAREEYVANEVEAATNAEHDCALKSRNRTLSKKVRLTLCNENGGRKVVVLERRKDLKGLFDAAKNKLKIKKPMHAILQSGENLGNTLLVGDGAVVVVKGKEGKGLPPRALPPVPAQKMDEQKRLEARESAERKEIEKVKETMASLAAVKKAYLKRNELDLKSEEGRGKLTESRERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQPDSNFISRFQPVVRTLRRVLWLEAV 1265 MARRQQEGKRGSRRGGGRGSTPGSRSGHRDDSGGLNTDSPRARSVTVRAKKLLLHDDCKKHILDLIHQLREQERDDDISPDGCTETRIKAPRRDRSSGMPRGSQTELMLKGGCDSSLEALEQALMEAGVGDGDAPSSEEEDLGESRVFAAMANMMARTKLSAVADDDSSEEGSESHSEDSLDEDEESSGSEDEGRAIQTSLSRQEQEVLLKRLIKSAREEYVANEVEAATNAEHDCALKSRNRTLSKKVRLTLCNENGGRKVVVLERRKDLKGLFDAAKNKLKIKKPMHAILQSGENLGNTLLVGDGAVVVVKGKEGKGLPPRALPPVPAQKMDEQKRLEARESAERKEIEKVKETMASLAAVKKAYLKRNELDLKSEEGRGKLTESRERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQPDSNFISRFQPVVRTLRRVLWLEAV Sbjct: 1 MARRQQEGKRGSRRGGGRGSTPGSRSGHRDDSGGLNTDSPRARSVTVRAKKLLLHDDCKKHILDLIHQLREQERDDDISPDGCTETRIKAPRRDRSSGMPRGSQTELMLKGGCDSSLEALEQALMEAGVGDGDAPSSEEEDLGESRVFAAMANMMARTKLSAVADDDSSEEGSESHSEDSLDEDEESSGSEDEGRAIQTSLSRQEQEVLLKRLIKSAREEYVANEVEAATNAEHDCALKSRNRTLSKKVRLTLCNENGGRKVVVLERRKDLKGLFDAAKNKLKIKKPMHAILQSGENLGNTLLVGDGAVVVVKGKEGKGLPPRALPPVPAQKMDEQKRLEARESAERKEIEKVKETMASLAAVKKAYLKRNELDLKSEEGRGKLTESRERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQPDSNFISRFQPVVRTLRRVLWLEAV 1265
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|585109898|gb|EWM27628.1| (atp-dependent rna helicase dhx57 [Nannochloropsis gaditana]) HSP 1 Score: 575.474 bits (1482), Expect = 1.928e-180 Identity = 352/869 (40.51%), Postives = 493/869 (56.73%), Query Frame = 0 Query: 223 ANEVEAATNAEHDCALKSRNRTLSKKVRLTLC---NENGGRKVVVLERRKDLKGLFDAAKNKLKIKKPMHA-ILQSGENLGNTLLVGDGAVVVVKGKEGKGLPPRALPPVPAQKMDEQKRLEARESAERKEIEKVKETMAS-----LAAVKKAYL-----------KRNELDLKSEEGRGKLTESR-ERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVE-ELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGF 1069 A + AA + L +R R S +V++ +C + +K VV+ R +L LF+AA++ L IK+P A +L++G L +T+ V V+ V K +P A P+P A +A R+E+E+ K A+ L +K+ Y KR+E E ++ + R ER E+ E+L +E LP +S RE ++ V + V+V+ G TGSGK+TQ+PQF+LD + G+G + NI+ TQPRRISAI + ERVA ER +VG VGYS+R R S T L F TTG+LLRRL D DL GVSHV++DEVHER + SDFLLI++++LL R LK++LMSATLQA LF YF N P +H+PGR F V ++L+D+E +L + + PG + + G G RG R + + + G G E +G G + +P IDY+LI KL LV + ++ + GGAVL+F G EI + M A+L + KR + LHSS+P++AQRA+FR+M GV KIVVATNIAETSIT+ D++ VID+GR K+ YD THM+SL VWTSQA+A QRAGRAGRVR G C+RLY++SFM+ M + PE+ R LE L LTIL LELG P FL RA+EPP P+A+ +++ L +I+A+ L + L PLGFHLA+LP D R+GKML+ S+ C++PILTIAA S +SPF P G ++EA A ++ SDH+A + + W +++ RK + NF+SIA LE+I+A R +L L+ GF Sbjct: 147 ATKKSAAVRQKEAQRLATRGR--SSRVQVIICAWHHPETTQKRVVVGRVPNLTTLFEAARDTLFIKRPKAAFVLETGLYLSDTMAVEQDTVICVTTK----VPEAAGVPLPGGGGLVLPLTPAERAARREEMEQSKAAAAAADQQKLEDIKEGYRVRAIRRAAGGKKRHERSPAESEALSRMLKQRLERVMETRGYREMLWARE--------------RLPIWSMREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILVTQPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGLLLRRLQEDPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLILMSATLQADLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKSVPGMSQGGVGGNGRGGGGRGGGRGRGLGGRGNGGGRGLGKEHRQLSNGSLKGIGNENGNGVAGPPLI-----------------SPKAEDPIDYQLIVKLLTLLV-TIREADDNEVGGAVLVFFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTSQAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSLTILALELGSPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSDHIAALEAYNGWAELRNEPYRVRKDYCTENFLSIATLEQIEALRKELRRQLIDIGF 977 HSP 2 Score: 131.339 bits (329), Expect = 4.514e-27 Identity = 63/172 (36.63%), Postives = 106/172 (61.63%), Query Frame = 0 Query: 1095 DKRLLRCILLCGLTPQIAKLVRPTR-GRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGI-ASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP----DSNFISRFQPVVRTLRRVL 1260 D L+RC L L PQ+ KLVRP + G GA F +D T VA+HP S+N R+ G +A +YH+K+++++ Y +D +FVSP ++LLFG +I+ + EHG + + + +T+D+WLSF+ ++VLV + L+ L +K + P + ++ Q VV++++R+L Sbjct: 1063 DVNLIRCCLFAALYPQVGKLVRPQKTGEGATFELRDKT-KVAVHPGSINFTRLMNLAPSGKDAFLLYHKKVQSTKIYAYDSTFVSPFTILLFGGDIKIQWEHGSLEGDQSIAVTMDNWLSFRMTASSAVLVKYIRHELNQLLLEKFSDPVQAMEEKRKAKAQAVVQSIKRLL 1233
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|553182710|ref|XP_005853770.1| (helicase domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422295292|gb|EKU22591.1| helicase domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 550.436 bits (1417), Expect = 9.043e-177 Identity = 312/728 (42.86%), Postives = 433/728 (59.48%), Query Frame = 0 Query: 346 ERKEIEKVKETMASLAAVKKAY--LKRNELDLKSEEGRGKLTESR-ERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVE-ELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGF 1069 +++++E +KE + A+++A KR+E E ++ + R ER E+ E+L +E LP +S RE ++ V + V+V+ G TGSGK+TQ+PQF+LD + G+G + NI+ TQPRRISAI + ERVA ER +VG VGYS+R R S T L F TTG+LLRRL D DL GVSHV++DEVHER + SDFLLI++++LL R LK++LMSATLQA LF YF N P +H+PGR F V ++L+D+E +L + + PG + + G G RG R + + + G G E +G G + +P IDY+LI KL LV + ++ + GGAVL+F G EI + M A+L + KR + LHSS+P++AQRA+FR+M GV KIVVATNIAETSIT+ D++ VID+GR K+ YD THM+SL VWTSQA+A QRAGRAGRVR G C+RLY++SFM+ M + PE+ R LE L LTIL LELG P FL RA+EPP P+A+ +++ L +I+A+ L + L PLGFHLA+LP D R+GKML+ S+ C++PILTIAA S +SPF P G ++EA A ++ SDH+A + + W +++ RK + NF+SIA LE+I+A R +L L+ GF Sbjct: 56 DQQKLEDIKEGY-RVRAIRRAAGGKKRHERSPAESEALSRMLKQRLERVMETRGYREMLWARE--------------RLPIWSMREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILVTQPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGLLLRRLQEDPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLILMSATLQADLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKSVPGMSQGGVGGNGRGGGGRGGGRGRGLGGRGNGGGRGLGKEHRQLSNGSLKGIGNENGNGVAGPPLI-----------------SPKAEDPIDYQLIVKLLTLLV-TIREADDNEVGGAVLVFFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTSQAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSLTILALELGSPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSDHIAALEAYNGWAELRNEPYRVRKDYCTENFLSIATLEQIEALRKELRRQLIDIGF 750
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|884978417|ref|XP_012996175.1| (PREDICTED: ATP-dependent RNA helicase DHX36 [Esox lucius]) HSP 1 Score: 555.829 bits (1431), Expect = 4.281e-175 Identity = 335/861 (38.91%), Postives = 489/861 (56.79%), Query Frame = 0 Query: 388 RERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGE--TVGYSVRFNTRRS-PQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIER-SIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAED-KSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRP--TRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP 1241 RE A + +L L++K SKY + R LP+F ++E ++E + ++QV+VV GETG GKTTQ+ QFILDD+ RG G C +VCTQPRRISAI VAERVA ER E+VG+ + GY +R +R Q +L+CTTG++L+ L L+ +SH+++DE+HER L SD LLI++KDLL R +LKV+LMSATL A FS YFDN P +HIPG F V + L+DV E++ RP+ R R R RG M ++S P + E E TL++ + L M D ID EL+ +L R +V +EE+ GA+L+FLPG I + M Q SD R I LHS MPT Q ++F++ GV KIV+ATNIAETSIT+ DV VID G+ K+T +D +++++ W S A+AKQR GRAGRV PG CY LY S M + PEI R LE L L I +L+LGP FL++A++PP+ +A+ ++ L+D+ A+ R+ L PLGFHLA LPV+ +GK+++F +L C+DP+LTIAA+ S + PF P+GK + A + ++ + D KSDHL +V + W+ K + F +NF+S L+ + + + + L+ GF ++K+ + + + N +++L++ +++ GL P++A +++P ++ R TK V IHP SVNA+ I N + +YH KMRTS +L+D + VSP S+L FG +I + + IA VD+W+ F++ + LV KK LD+ L +KI P Sbjct: 209 RENALDQ-QLKRDLERKRADSKYL-EMLKFREKLPSFGKKEELVEVIRSNQVLVVSGETGCGKTTQVTQFILDDYIDRGMGSLCRVVCTQPRRISAISVAERVAAERAERVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRHDLKVILMSATLNAEKFSRYFDNCPMIHIPGMTFPVQEFLLEDVVEMLR-----YRPQKQER---------RPRWKRGFMQAQNSRP------------EKEQKEAEYKESWPCYARTLRDRYSDSTIEVLEMM----DDDDKIDLELVVQLIRHIV-----LSEEE--GAILVFLPGWDNISSLNDLLMTQQMFKSD--RFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSLANAKQRRGRAGRVCPGKCYHLYN-SLRASLMEAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAITLAITHLMDLNAL---------ERSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKVADMRRRTLSRDSKSDHLTIVNAFCGWEEAKLRSNQVEREFCWSNFLSANTLQMLHNMKGQFAEHLLGAGFI---------SSKNPKDPEANFNSENEKLIKAVIVAGLYPKVA-MIKPSGSKKRPVRVYTKTDG-KVCIHPKSVNAEEIQ-----FNYSWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQTDEETIA-------VDEWIVFQSPARIANLVKSLKKELDSLLEEKIRNP 995
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1207194696|ref|XP_001921063.3| (putative ATP-dependent RNA helicase DHX57 isoform X1 [Danio rerio]) HSP 1 Score: 564.688 bits (1454), Expect = 1.943e-174 Identity = 344/890 (38.65%), Postives = 499/890 (56.07%), Query Frame = 0 Query: 393 ESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGEC-NIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRP-RAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTA-RNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKK--RACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELG---PPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAP-------CATAESQSATKSLQAIDYDSNEN--DKRLLRCILLCGLTPQIAKLVRPTR-----GRGA----------HFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLF-GSNIRTRREHGGIASKVVNITVDD-WLSF-KTKEETSVLVTVFKKHLDACLTQKITQPDSNFIS 1247 E+ +L ++K S +Y S EQR LPA+ +REAILE + +QV+V+ G TG GKTTQ+PQFILD++ G+ NI+CTQPRRISAI VA RVA+ER E +G + GY +R T RS TRL+FCTTGVLLRRL D +L+GV+HV+VDEVHERT ESDFLL+VLKDL+ R +LKV++MSATL A LFS YF+N PC+HIPGR F V Q +L+D G P R + + +R+ G + G R E D + S T+ RN + D Q + L + ++ + D++ +D L L+E D + GAVL+FLPGL+EI++ ++ + + ++++ R ++ LHSS+ E Q+A+F + + GV KI+++TNIAETS+T+ DV +VID+GR K+ YD M SL +VW S+A+A QR GRAGRV G+C+ L+T + +++ PEI+RV LE L L + +LE+ P ++ + +EPP+ +++A+ Q L ALG S L PLG+HLA LPVD R+GK+++ ++F C+DP LTIAA+ + +SPFV+P KREEA K F+ SDHLAL+ +K W A + + NF+SI L+EI + + + L GF S+ + L+A Y++N N + +L+ +L L P + ++ P +GA F+TK V IHPSSVN + + VYH K++TSR ++ D S V ++LF G + + G I++DD W+ F E + LV + LD L +KI P + IS Sbjct: 556 ENKKLCREFKRKRSSRRYI-SMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSTKLNRSS-----GPGGKTGKGRALVEDFDDDYGGWSFTSFRNKESVKDSVPDQQLSQQDLTVRYSNYSKSVVKTLAAMDLDKINMD------LVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRL-----CALGALTDEES----LTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLGFSLANSDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKMSSKGSDGVLEATGYEANLNSDNTKLMSAMLCAALYPNVVQVRSPQMKYKLTSKGAMKMQPKAEEQRFMTKSDGA-VHIHPSSVNF-----SVRHYDSPYLVYHEKVKTSRVFIRDCSMVCVYPMVLFGGGQVNVELQRGQFI-----ISLDDGWIKFAAASHEVAELVKELRWELDQLLEEKIKNPSMDLIS 1413
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1207114885|ref|XP_021336395.1| (putative ATP-dependent RNA helicase DHX57 isoform X1 [Danio rerio]) HSP 1 Score: 562.762 bits (1449), Expect = 8.318e-174 Identity = 344/890 (38.65%), Postives = 498/890 (55.96%), Query Frame = 0 Query: 393 ESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGEC-NIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRP-RAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTA-RNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKK--RACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELG---PPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAP-------CATAESQSATKSLQAIDYDSNEN--DKRLLRCILLCGLTPQIAKLVRPTR-----GRGA----------HFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLF-GSNIRTRREHGGIASKVVNITVDD-WLSF-KTKEETSVLVTVFKKHLDACLTQKITQPDSNFIS 1247 E+ +L ++K S +Y S EQR LPA+ +REAILE + +QV+V+ G TG GKTTQ+PQFILD++ G+ NI+CTQPRRISAI VA RVA+ER E +G + GY +R T RS TRL+FCTTGVLLRRL D +L+GV+HV+VDEVHERT ESDFLL+VLKDL+ R +LKV++MSATL A LFS YF+N PC+HIPGR F V Q +L+D G P R + + +R+ G G R E D + S T+ RN + D Q + L + ++ + D++ +D L L+E D + GAVL+FLPGL+EI++ ++ + + ++++ R ++ LHSS+ E Q+A+F + + GV KI+++TNIAETS+T+ DV +VID+GR K+ YD M SL +VW S+A+A QR GRAGRV G+C+ L+T + +++ PEI+RV LE L L + +LE+ P ++ + +EPP+ +++A+ Q L ALG S L PLG+HLA LPVD R+GK+++ ++F C+DP LTIAA+ + +SPFV+P KREEA K F+ SDHLAL+ +K W A + + NF+SI L+EI + + + L GF S+ + L+A Y++N N + +L+ +L L P + ++ P +GA F+TK V IHPSSVN + + VYH K++TSR ++ D S V ++LF G + + G I++DD W+ F E + LV + LD L +KI P + IS Sbjct: 555 ENKKLCREFKRKRSSRRYI-SMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSTKLNRSS-----GPGGTTGKGRALVEDFDDDYGGWSFTSFRNKESVKDSVPDQQLSQQDLTVRYSNYSKSVVKTLAAMDLDKINMD------LVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPTEGSLEAAKQRL-----CALGALTDEES----LTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLALMQAYKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKMSSKGSDGVLEATGYEANLNSDNTKLMSAMLCAALYPNVVQVRSPQMKYKLTSKGAMKMQPKAEEQRFMTKSDGA-VHIHPSSVNF-----SVRHYDSPYLVYHEKVKTSRVFIRDCSMVCVYPMVLFGGGQVNVELQRGQFI-----ISLDDGWIKFAAASHEVAELVKELRWELDQLLEEKIKNPSMDLIS 1412
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1207135186|ref|XP_005159264.2| (ATP-dependent RNA helicase DHX36 isoform X1 [Danio rerio]) HSP 1 Score: 549.666 bits (1415), Expect = 4.389e-173 Identity = 329/855 (38.48%), Postives = 485/855 (56.73%), Query Frame = 0 Query: 402 QKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGE--TVGYSVRFNTRRS-PQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSE--PCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDK----KRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYT--ESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAED-KSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGRGAHFITKDPTL---DVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP 1241 QKKE ++ Y + R LP++ RE ++ ++A++V+V+ GETG GKTTQ+ QFILDD+ RG+G C +VCTQPRRISAI VAERVA ER E VGE + GY +R +R Q LL+CTTGV+L+ L D L+ ++H+++DE+HER+++SD L+ ++KDLL R +LKVVLMSATL A FS YF+N P +HIPG F V++ L+DV EL+ + P + P + +H + R ++G + K E PC AR TL++ F L M D ID EL A L R + + +NE GA+L+FLPG I + D L+SD+ R I LHS MPT +Q +F+K GV KIV+ATNIAETSIT+ DV +VID G+ K+T +D ++ ++ W S A+AKQR GRAGRV PG CY LY + + DN + PEI+R LE L L I +L+LGP FLQ+ ++PPS +A++ ++ L+D+ A+ R L PLGFHLA +PV+ +GKM++F +L C+DP+LTIAA+ S + PF P+GK + A ++ F+++ +SDHL++V + W+ K + + + NF+S L+ + + + + L++ GF + S+ + N +K+L++ +++ GL P++AK + P+ + K T V IHP SVNA+ + VYH KM+T+ +L+D + VSP S+L FG NI +R+ I VD+W+ F++ + LV KK LD L +KI P Sbjct: 202 QKKEDNAAYI-EMLKFRKKLPSYGMREELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISVAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFPVTEYLLEDVVELLGFQ--PRYKQRKPHYRKRNNHGSSARPEKGKIEAKYHESWPC---------YAR-----------------TLRDRFSDTTIEVLGMM----DDDDNIDLELTAALIRHIAVN---ENE----GAILVFLPGWDNI-----STLNDLLMSDQMFKSDRFIIIPLHSLMPTVSQTQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYNGLRASLLDN---YQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNAL---------DRDEKLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSDHLSIVNAFLGWEDAKRRGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVNSKDPKDPSS---------NINSENKKLVKAVIVAGLYPKVAK-ISPSHNKKRPMPVKVYTKADGKVCIHPKSVNAEE-----TQFQYKWLVYHLKMKTTSIFLYDCTEVSPFSLLFFGGNISIQRDQDQDT-----IAVDEWIVFQSPGRIAHLVKDLKKELDVLLEEKIKSP 979
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1025247001|ref|XP_016368095.1| (PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sinocyclocheilus rhinocerous] >gi|1025247003|ref|XP_016368097.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sinocyclocheilus rhinocerous] >gi|1025247007|ref|XP_016368098.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sinocyclocheilus rhinocerous] >gi|1025247011|ref|XP_016368099.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Sinocyclocheilus rhinocerous]) HSP 1 Score: 559.296 bits (1440), Expect = 1.656e-172 Identity = 342/889 (38.47%), Postives = 497/889 (55.91%), Query Frame = 0 Query: 393 ESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGEC-NIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRP-RAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIERSIRTMKQDALLSDKK--RACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELG---PPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAP-------CATAESQSATKSLQAIDYDSNEN--DKRLLRCILLCGLTPQIAKLVRPT-----RGRGA----------HFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLF-GSNIRTRREHGGIASKVVNITVDD-WLSF-KTKEETSVLVTVFKKHLDACLTQKITQPDSNFIS 1247 E+ +L ++K+ S +Y S EQR LPA+ +REAILE + +QV+V+ G TG GKTTQ+PQFILDD+ G+ NI+CTQPRRISAI VA RVA+ER E +G + GY +R T RS TRL+FCTTGVLLRRL D +L+G++HV+VDEVHERT ESDFLL+VLKDL+A R +LK+++MSATL A LFS YF+ P +HIPGR F V Q +L+D G P R + + +R G+ R G R E D + S T ++S + D Q + L + ++ + D++ +D L L+E D + GAVL+FLPGL+EI++ ++ + + ++++ R ++ LHSS+ E Q+A+F + G KI+++TNIAETS+T+ DV +VID+GR K+ YD M SL +VW S+A+A QR GRAGRV G+C+ L+T +++ PEI+RV LE L L + +LE+ P E+ + +EPP+ +++A+ Q L ALG S L PLG+HLA LPVD R+GK+++ ++F C+DP LTIAA+ + +SPFV+P KREEA K F+ SDHLAL+ +K W + A + + NF+SI L+EI + + + L GF S+ + L+A Y++N N + +L+ +L L P + ++ P +GA F+TK V IHPSSVN + + VYH K++TSR +L D S V ++LF G + + G I++DD W+ F E + LV + +D L +KI P + IS Sbjct: 559 ENKKLCREFKRKQSSRRYT-SMQEQRQKLPAWQKREAILECLDKNQVLVISGMTGCGKTTQIPQFILDDFLQTGRQDRVPNIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSSTRLMFCTTGVLLRRLEGDSELSGITHVIVDEVHERTEESDFLLLVLKDLIAKRTDLKIMMMSATLNAELFSQYFNKCPSIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSTKQTRPS-----GQGGRAGKGRAPVEDFDDD-RGWSFTKKDSV--KDSVSDQQLSQQELTVRYSNYSKSVVKTLAAMDLDKINMD------LVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPPEGATKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWLSRANALQRKGRAGRVASGVCFHLFTSHRFTHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLESVFSQLIEPPAEGSLEAAKQRL-----CALGALTDKES----LTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLGFSLANSDHLALLQAYKGWWNATQSGSKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKISSKGSDGVLEATGYEANLNSGNTKLMSAMLCAALYPNVVQVRSPQGKYKLTSKGAMKMQPKAEELRFMTKSDGA-VHIHPSSVNF-----SVRHYDSPYLVYHEKVKTSRVFLRDCSMVCVYPMVLFGGGQVSVELQRGEFI-----ISLDDGWIKFAAASHEVAELVKELRWEMDQLLEEKIRNPSMDLIS 1412
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1211329067|ref|XP_021444178.1| (ATP-dependent RNA helicase DHX36 [Oncorhynchus mykiss]) HSP 1 Score: 549.28 bits (1414), Expect = 2.293e-172 Identity = 332/861 (38.56%), Postives = 487/861 (56.56%), Query Frame = 0 Query: 388 RERAFESLRLAELLQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGE--TVGYSVRFNTRRS-PQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSEPCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIE-RSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFA-EDKSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRP--TRGRGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP 1241 RE A + +L L++K+ SKY + R LP+F ++E ++E + + QV+VV GETG GKTTQ+ QFILDD+ RG G C +VCTQPRRISAI VAERVA ER E VG+ + GY +R +R Q +L+CTTG++L+ L L+ +SH+++DE+HER L SD LLI++KDLL R +LKV+LMSATL A FS YF+N P +HIPG F V + L+DV E++ R P + PR R F +G+ R +K +E + P AR TL++ + L M D ID ELI +L R +V EE GA+L+FLPG I + M Q SD R I LHS MPT Q ++F++ GV KIV+ATNIAETSIT+ DV VID G+ K+T +D +++++ W S A+AKQR GRAGRV PG CY LY + + PEI R LE L L I +L+LGP FL++A++PP+ +AV ++ L+D+ A+ R+ L PLGFHLA LPV+ +GK+++F +L C+DP+LTIAA+ S + PF P+GK + A ++ + E KSDHL ++ + W+ K + F NF+S L+ + + + + L+ GF +++K+ + + ++N ++++L++ +++ GL P++A +++P ++ R TK V IHP SVNA+ + N +YH KMRTS +L+D + VSP S+L FG ++ + + I VDDW+ F++ + LV KK LD+ L +KI P Sbjct: 221 RENALDQ-QLKRDLERKKADSKYL-DMLKFREKLPSFGKKEELVELIRSSQVLVVSGETGCGKTTQVTQFILDDYIERGMGSVCRVVCTQPRRISAISVAERVAAERAESVGDGNSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSSPLLSTISHLVLDEIHERNLHSDVLLIIVKDLLRVRQDLKVILMSATLNAEKFSKYFNNCPMIHIPGMTFPVQEFLLEDVLEMIRYR--PQKKEQRPRWKRG---FMQGQNSRPEKDQKEAEYKESWPC----YAR-----------------TLRDKYSDRTIDVLEMM----DDDDKIDLELIVQLIRHIVL----SQEE---GAILVFLPGWDNISGLNDLLMAQQMFKSD--RFVIIPLHSLMPTVTQTSVFKRPPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMTAEWVSLANAKQRRGRAGRVCPGKCYHLYN-GLRASLLDAYQLPEIMRTPLEELCLQIKILKLGPIAEFLRKALDPPTEEAVTLAITHLMDLNAL---------DRSEALTPLGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPMGKEKMADFRRRTLSRESKSDHLTIIYAFTGWEEAKRRGYKFEREFCWDNFLSANTLQMLHNMKGQFAEHLLGAGF---------TSSKNPKDPESNTNSDNEKLIKAVIVAGLYPKVA-MIKPSGSKKRPVRVYTKTDG-KVCIHPKSVNAEE-----TQFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDVTIQMDQDQ-----ETIAVDDWIVFQSPARIAHLVKNLKKELDSLLEEKIRSP 1009
BLAST of EWM22445.1 vs. NCBI_GenBank
Match: gi|1007731184|ref|XP_015806564.1| (PREDICTED: ATP-dependent RNA helicase DHX36 [Nothobranchius furzeri]) HSP 1 Score: 546.969 bits (1408), Expect = 8.118e-172 Identity = 329/854 (38.52%), Postives = 472/854 (55.27%), Query Frame = 0 Query: 401 LQKKEGSSKYKGSFFEQRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGE--TVGYSVRFNTRRSP-QTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQASLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRASRAGSHFARGRTDRGGMARKSSE-----PCDGEPLSHSHTARNSTGKGEETEDGQDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGDKNEEDGGGAVLIFLPGLSEIE-RSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAED-KSDHLALVALWKAWKRVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATKSLQAIDYDSNENDKRLLRCILLCGLTPQIAKLVRPTRGR---GAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNEALAVYHRKMRTSRTYLHDISFVSPLSVLLFGSNIRTRREHGGIASKVVNITVDDWLSFKTKEETSVLVTVFKKHLDACLTQKITQP 1241 LQ K+ KYK + R LP+F ++E ++E + ++ V+VV GETG GKTTQ+ QFILDD RG G C +VCTQPRRISAI VAERVA ER E VG + GY +R +R Q +L+CTTG++L+ L D L+ +SH+++DE+HER L+SD LL+++KDLL R +LKVVLMSATL A FS YFDN P +HIPG F V + L+DV E+ RP+ R F +GR R K E PC L ++ +ST + E DGDE ID ELI L R +V + +G GA+L+FLPG I + M Q SD R I LHS MPT Q +F++ AGV KIV+ATNIAETSIT+ DV VID G+ K+T +D +++++ W S A+AKQR GRAGRV+PG CY LY + + PEI R LE L L I +L+LG FL++A++PP+ KAV +++ L D+ A+ L LGFHLA LPV+ +GK+++F +L C+DP+LTIAA+ S + PF P+GK + A + ++ + + KSDHL +V K W+ K + F NF+S L+ + + + + L+ GF + ++ + N ++++L++ +++ GL P++A +++P+ + G T+ V IHP SVNA+ + N A +YH KMRTS +L+D + VSP S+L FG +I +++ I VD W+ F++ + LV KK LD+ L +KI+ P Sbjct: 221 LQSKKSDWKYK-EMLKFREKLPSFGKKEELVELINSNSVLVVSGETGCGKTTQVTQFILDDHINRGMGSTCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLVIVKDLLRLRSDLKVVLMSATLNAEKFSKYFDNCPMIHIPGLTFPVEEFLLEDVVEMTK-----YRPKNQDRRPTWKRGFWQGRNSRPEKEEKEQEYRESWPCYARTLQGRYS--DSTIEALEM---LDGDE-------------------------KIDLELILTLIRHIVLN-------EGEGAILVFLPGWDNISGLNDLLMAQQMFRSD--RFVIIPLHSLMPTVNQTQVFKRPPAGVRKIVIATNIAETSITIDDVVFVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYN-GLRASLLDAYQLPEIMRTPLEELCLQIKILKLGFISQFLEKALDPPTEKAVNLAIKSLTDLNAL---------DHTEGLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMADMRRRVLSRNSKSDHLTIVNAVKGWEEAKQRGVRYERDFCWDNFLSANTLQMLHNMKGQFAEHLMHAGFVSSGDPKDPAS---------NVNSDNEKLIKAVIVAGLYPKVA-MIKPSHSKKRPGVKVYTQADG-KVCIHPKSVNAEE-----KEFNYAWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDISIQKDEDQ-----ETIAVDQWIVFRSPARIAHLVKSLKKELDSLLEEKISNP 998 The following BLAST results are available for this feature:
BLAST of EWM22445.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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