EWM22486.1, cds8216 (CDS) Nannochloropsis gaditana

Overview
NameEWM22486.1
Unique Namecds8216
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:156427..156580 +
Alignment locationKK037248.1:156780..158293 +
Alignment locationKK037248.1:158406..158960 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22486.1
ProductZinc finger, RING-type
Orig transcript idgnl|cribi|Naga_100011g51.3486.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:156427..156580 +
KK037248.1supercontigKK037248.1:156780..158293 +
KK037248.1supercontigKK037248.1:158406..158960 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
Homology
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|585102992|gb|EWM22486.1| (Zinc finger, RING-type [Nannochloropsis gaditana])

HSP 1 Score: 1514.98 bits (3921), Expect = 0.000e+0
Identity = 740/740 (100.00%), Postives = 740/740 (100.00%), Query Frame = 0
Query:    1 MAGMTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVESDNVSRWTHFRLMALMYTLLVVDVAFVAGCVYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTPVRSGPPAAAVVADAGAAVGEERERLAEAGDDMAAPSDQAPAGPQETPNASLRGPSHPSSSQWGATNTRGYAGVPTRATRWPASLPDGAPLPSNFPHPPASNRGSITNPPASSPHPPVTSNIAGQTAQYPPYPVPTPSLSSTWPYVPQPPPFIPPSALFGMFPTDASALSGDASLLMGNMDYPAPPFALYRVSSPNGVQVRASPESTSAILRTHRQNETILILERKAAQAGSEVVYRVLGGGFIHDRLESENSRAALEKILSPFPFSSGLSPSTPSSLLPFPSPASVTSSTGIGGAGGLSRSLISLRLELNEARAGMDTVVEGLAVLLARQQAEALRLQNVLAGLEHAHEELAARTATATNGPDKEGADAESKKESGFGMEESKFTGENGADFRAAATAE 740
            MAGMTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVESDNVSRWTHFRLMALMYTLLVVDVAFVAGCVYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTPVRSGPPAAAVVADAGAAVGEERERLAEAGDDMAAPSDQAPAGPQETPNASLRGPSHPSSSQWGATNTRGYAGVPTRATRWPASLPDGAPLPSNFPHPPASNRGSITNPPASSPHPPVTSNIAGQTAQYPPYPVPTPSLSSTWPYVPQPPPFIPPSALFGMFPTDASALSGDASLLMGNMDYPAPPFALYRVSSPNGVQVRASPESTSAILRTHRQNETILILERKAAQAGSEVVYRVLGGGFIHDRLESENSRAALEKILSPFPFSSGLSPSTPSSLLPFPSPASVTSSTGIGGAGGLSRSLISLRLELNEARAGMDTVVEGLAVLLARQQAEALRLQNVLAGLEHAHEELAARTATATNGPDKEGADAESKKESGFGMEESKFTGENGADFRAAATAE
Sbjct:    1 MAGMTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVESDNVSRWTHFRLMALMYTLLVVDVAFVAGCVYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTPVRSGPPAAAVVADAGAAVGEERERLAEAGDDMAAPSDQAPAGPQETPNASLRGPSHPSSSQWGATNTRGYAGVPTRATRWPASLPDGAPLPSNFPHPPASNRGSITNPPASSPHPPVTSNIAGQTAQYPPYPVPTPSLSSTWPYVPQPPPFIPPSALFGMFPTDASALSGDASLLMGNMDYPAPPFALYRVSSPNGVQVRASPESTSAILRTHRQNETILILERKAAQAGSEVVYRVLGGGFIHDRLESENSRAALEKILSPFPFSSGLSPSTPSSLLPFPSPASVTSSTGIGGAGGLSRSLISLRLELNEARAGMDTVVEGLAVLLARQQAEALRLQNVLAGLEHAHEELAARTATATNGPDKEGADAESKKESGFGMEESKFTGENGADFRAAATAE 740          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|567972384|gb|ETK97367.1| (hypothetical protein L915_00071 [Phytophthora parasitica] >gi|568000713|gb|ETL50723.1| hypothetical protein L916_00068 [Phytophthora parasitica] >gi|568029842|gb|ETM03756.1| hypothetical protein L917_00059 [Phytophthora parasitica] >gi|570962473|gb|ETP27452.1| hypothetical protein F441_00069 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 411.764 bits (1057), Expect = 2.125e-131
Identity = 197/342 (57.60%), Postives = 253/342 (73.98%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGA-KKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTP 341
            M F  Y + S++     + Y + +R QFYP+VIYLVTSK SVLVLGN GL+LT+L GR LK+ F G LRD EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D +SR TH RL+ LM  L  VD  FV  C       GPSV ILFGFE+ IL V++ +T LRY L++VD R++G W  K +YLF+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+  E  P A KKLPCSHIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTMLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICRE--EMTPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|669140154|ref|XP_008605645.1| (hypothetical protein SDRG_01870 [Saprolegnia diclina VS20] >gi|530742559|gb|EQC40801.1| hypothetical protein SDRG_01870 [Saprolegnia diclina VS20])

HSP 1 Score: 412.535 bits (1059), Expect = 3.000e-131
Identity = 188/337 (55.79%), Postives = 252/337 (74.78%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFV--AGCVYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTN 337
            M F  Y + S+   A  V+Y + +R QFYP VIYLVTSK SV+VL N+  +LT+L GR  K IF G LRD E+E+LYD+AR+A+ ETC  L++FREE+T++VL LFT LLF K+FHWLCQ R E++E S+ VSR TH RL+ LM  L  VD++FV  +      +GPSVL+LFGFE+ +L +S+ +  +RY LHL+D R++G W  K +Y+F+LE  TE+V+ + Y++FF IIFTYYGMPLH++RDLWMS  NL+RR++ + +YR +TANMNERFP  T +EL+  +  CIICR+ M      KKLPCSHIFHL+CLR+WLQ+QQ+CPTCRA+IPT+
Sbjct:    1 MRFGLYASTSLLAGAGLVAYTYHTRQQFYPTVIYLVTSKVSVMVLCNVAFVLTILFGRVFKRIFLGTLRDAELEMLYDHARFAIAETCFTLSVFREEMTLKVLALFTLLLFIKTFHWLCQWRGEHIEQSEVVSRSTHVRLVMLMSLLAAVDMSFVVLSAVKVLERGPSVLVLFGFEFLVLFISLVAVFMRYVLHLIDARVDGTWANKFTYVFYLELITEIVKLIVYLIFFMIIFTYYGMPLHLLRDLWMSIRNLQRRIITYFRYRRITANMNERFPSPTEDELNDTDRICIICREEMTPE-TCKKLPCSHIFHLNCLRMWLQRQQTCPTCRANIPTD 336          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|675161575|ref|XP_008889672.1| (hypothetical protein PPTG_00056 [Phytophthora parasitica INRA-310] >gi|568108853|gb|ETN23460.1| hypothetical protein PPTG_00056 [Phytophthora parasitica INRA-310])

HSP 1 Score: 410.223 bits (1053), Expect = 8.465e-131
Identity = 197/342 (57.60%), Postives = 252/342 (73.68%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGA-KKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTP 341
            M F  Y + S++     + Y + +R QFYP+VIYLVTSK SVLVLGN GL+LT L GR LK+ F G LRD EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D +SR TH RL+ LM  L  VD  FV  C       GPSV ILFGFE+ IL V++ +T LRY L++VD R++G W  K +YLF+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+  E  P A KKLPCSHIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICRE--EMTPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|570999348|gb|ETP55378.1| (hypothetical protein F442_00060 [Phytophthora parasitica P10297])

HSP 1 Score: 410.223 bits (1053), Expect = 8.742e-131
Identity = 195/341 (57.18%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTP 341
            M F  Y + S++     + Y + +R QFYP+VIYLVTSK SVLVLGN GL+LT L GR LK+ F G LRD EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D +SR TH RL+ LM  L  VD  FV  C       GPSV ILFGFE+ IL V++ +T LRY L++VD R++G W  K +YLF+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      KKLPCSHIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEMTPD-ACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|570338432|gb|ETO86380.1| (hypothetical protein F444_00066 [Phytophthora parasitica P1976])

HSP 1 Score: 410.223 bits (1053), Expect = 9.323e-131
Identity = 195/341 (57.18%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGCVY--FWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTP 341
            M F  Y + S++     + Y + +R QFYP+VIYLVTSK SVLVLGN GL+LT L GR LK+ F G LRD EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D +SR TH RL+ LM  L  VD  FV  C       GPSV ILFGFE+ IL V++ +T LRY L++VD R++G W  K +YLF+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      KKLPCSHIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLNVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEMTPD-ACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|970632650|gb|KUF78804.1| (E3 ubiquitin-protein ligase HRD1 [Phytophthora nicotianae])

HSP 1 Score: 410.223 bits (1053), Expect = 9.423e-131
Identity = 195/341 (57.18%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTP 341
            M F  Y + S++     + Y + +R QFYP+VIYLVTSK SVLVLGN GL+LT L GR LK+ F G LRD EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D +SR TH RL+ LM  L  VD  FV  C       GPSV ILFGFE+ IL V++ +T LRY L++VD R++G W  K +YLF+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      KKLPCSHIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEMTPD-ACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|568060522|gb|ETM57051.1| (hypothetical protein L914_00061 [Phytophthora parasitica])

HSP 1 Score: 410.223 bits (1053), Expect = 9.627e-131
Identity = 195/341 (57.18%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTP 341
            M F  Y + S++     + Y + +R QFYP+VIYLVTSK SVLVLGN GL+LT L GR LK+ F G LRD EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D +SR TH RL+ LM  L  VD  FV  C       GPSV ILFGFE+ IL V++ +T LRY L++VD R++G W  K +YLF+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      KKLPCSHIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEMTPD-ACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|566034740|gb|ETI57651.1| (hypothetical protein F443_00071 [Phytophthora parasitica P1569])

HSP 1 Score: 410.223 bits (1053), Expect = 1.155e-130
Identity = 195/341 (57.18%), Postives = 250/341 (73.31%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGC--VYFWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNAPTP 341
            M F  Y + S++     + Y + +R QFYP+VIYLVTSK SVLVLGN GL+LT L GR LK+ F G LRD EVELL++N RYAVTETCLALTIFR+E++  V+ LFTAL+F K FHWL QSR+E++E +D +SR TH RL+ LM  L  VD  FV  C       GPSV ILFGFE+ IL V++ +T LRY L++VD R++G W  K +YLF+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+ M      KKLPCSHIFH+DCL++W+Q+QQ+CPTCR+ IPT    P
Sbjct:    1 MKFWLYSSASLAACVGLLWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFRDEISFHVMVLFTALVFLKIFHWLSQSRIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCSLKVMEIGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICREEMTPD-ACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTIPTGPRRP 340          
BLAST of EWM22486.1 vs. NCBI_GenBank
Match: gi|695440571|ref|XP_009532996.1| (hypothetical protein PHYSODRAFT_454953, partial [Phytophthora sojae] >gi|348672843|gb|EGZ12663.1| hypothetical protein PHYSODRAFT_454953, partial [Phytophthora sojae])

HSP 1 Score: 398.667 bits (1023), Expect = 3.178e-130
Identity = 195/335 (58.21%), Postives = 250/335 (74.63%), Query Frame = 0
Query:    4 MTFASYLALSISLTAFTVSYAFQSRVQFYPAVIYLVTSKPSVLVLGNMGLMLTLLVGRTLKTIFFGRLRDVEVELLYDNARYAVTETCLALTIFREELTVRVLTLFTALLFSKSFHWLCQSRVEYVE-SDNVSRWTHFRLMALMYTLLVVDVAFVAGCVY--FWKGPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELSGCEHTCIICRDLMEAGPGA-KKLPCSHIFHLDCLRLWLQQQQSCPTCRADI 334
            M F  Y + S++  A  + Y + +R QFYP+VIYLVTSK SVLVLGN GL+LT L GR LK+ F G LRD EVELL++N RYAVTETCLALTIFREE++  V+ LFTAL+F K FHWL Q+R+E++E +D +SR TH RL+ LM  L  VD  FV  C       GPSV ILFGFE+ IL V++ +T LRY L++VD R++G W  K +YLF+LE  +EV + + Y+VFF +IFTYYGMPLHIVRDLW+S  NL+RR+  + +YR +TA++NERFP+ T EEL   + TCIICR+  E  P A KKLPCSHIFH+DCL++W+Q+QQ+CPTCR+ I
Sbjct:    1 MKFWLYSSASLAACAGLIWYTYVTRQQFYPSVIYLVTSKVSVLVLGNAGLVLTTLFGRLLKSFFLGTLRDAEVELLHENVRYAVTETCLALTIFREEISFHVMVLFTALVFLKIFHWLSQARIEFIEQTDVISRLTHVRLVGLMAMLAAVDTGFVVWCTLKVVENGPSVFILFGFEFLILLVTIVATFLRYVLYVVDSRMDGAWTNKFTYLFYLELVSEVTKLVVYLVFFMLIFTYYGMPLHIVRDLWISIKNLQRRIASYFRYRKITAHLNERFPNPTEEELQETDRTCIICRE--EMTPDACKKLPCSHIFHVDCLKMWVQRQQTCPTCRSTI 333          
The following BLAST results are available for this feature:
BLAST of EWM22486.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102992|gb|EWM22486.1|0.000e+0100.00Zinc finger, RING-type [Nannochloropsis gaditana][more]
gi|567972384|gb|ETK97367.1|2.125e-13157.60hypothetical protein L915_00071 [Phytophthora para... [more]
gi|669140154|ref|XP_008605645.1|3.000e-13155.79hypothetical protein SDRG_01870 [Saprolegnia dicli... [more]
gi|675161575|ref|XP_008889672.1|8.465e-13157.60hypothetical protein PPTG_00056 [Phytophthora para... [more]
gi|570999348|gb|ETP55378.1|8.742e-13157.18hypothetical protein F442_00060 [Phytophthora para... [more]
gi|570338432|gb|ETO86380.1|9.323e-13157.18hypothetical protein F444_00066 [Phytophthora para... [more]
gi|970632650|gb|KUF78804.1|9.423e-13157.18E3 ubiquitin-protein ligase HRD1 [Phytophthora nic... [more]
gi|568060522|gb|ETM57051.1|9.627e-13157.18hypothetical protein L914_00061 [Phytophthora para... [more]
gi|566034740|gb|ETI57651.1|1.155e-13057.18hypothetical protein F443_00071 [Phytophthora para... [more]
gi|695440571|ref|XP_009532996.1|3.178e-13058.21hypothetical protein PHYSODRAFT_454953, partial [P... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8240rna8240Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications