EWM22418.1, cds8211 (CDS) Nannochloropsis gaditana

Overview
NameEWM22418.1
Unique Namecds8211
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:145702..145877 +
Alignment locationKK037248.1:145979..146073 +
Alignment locationKK037248.1:146304..146405 +
Alignment locationKK037248.1:146542..146624 +
Alignment locationKK037248.1:146770..147556 +
Alignment locationKK037248.1:147697..148480 +
Alignment locationKK037248.1:148529..148691 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22418.1
Productadenosine trna methylthiotransferase
Orig transcript idgnl|cribi|Naga_100011g46.3418.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:145702..145877 +
KK037248.1supercontigKK037248.1:145979..146073 +
KK037248.1supercontigKK037248.1:146304..146405 +
KK037248.1supercontigKK037248.1:146542..146624 +
KK037248.1supercontigKK037248.1:146770..147556 +
KK037248.1supercontigKK037248.1:147697..148480 +
KK037248.1supercontigKK037248.1:148529..148691 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006464cellular protein modification process
GO:0006400tRNA modification
GO:0043412macromolecule modification
GO:0009451RNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016853isomerase activity
GO:0016740transferase activity
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC
IPR006463MiaB_methiolase
IPR020612Methylthiotransferase_CS
IPR023970MeThioTfrase/rSAM
IPR023404rSAM_horseshoe
IPR007197rSAM
IPR005839Methylthiotransferase
IPR013848Methylthiotransferase_N
IPR002792TRAM_dom
IPR006638Elp3/MiaB/NifB
Homology
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|585102924|gb|EWM22418.1| (adenosine trna methylthiotransferase [Nannochloropsis gaditana])

HSP 1 Score: 1510.35 bits (3909), Expect = 0.000e+0
Identity = 729/729 (100.00%), Postives = 729/729 (100.00%), Query Frame = 0
Query:    1 MRHQGHSGRRRALWMVRGPVLVLILLAELLAHGIPLVQCFTALQRFDSRRTPAAVASDSYEIRRQHKHNYISCSATAQKLWQTSGAKTMEESMNLSLKDFKERIEAQRRKSVIAVRARHLLVEVKPLCDSLFEDVKKGAEFHALAAAISACSVTRDAGGDVGWIGMADEFMEDVLPRHVRELALQHKPGDVFKITSLRGFHLVKIEDVMFDLSYTSKPQGRVQGRGLLPTPLKELMAKDKDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYMLGTIVKRIQKWALIHIFLINDFSKPPTSTPTNVKLRRLRSRVKCKLMALKSHEK 729
            MRHQGHSGRRRALWMVRGPVLVLILLAELLAHGIPLVQCFTALQRFDSRRTPAAVASDSYEIRRQHKHNYISCSATAQKLWQTSGAKTMEESMNLSLKDFKERIEAQRRKSVIAVRARHLLVEVKPLCDSLFEDVKKGAEFHALAAAISACSVTRDAGGDVGWIGMADEFMEDVLPRHVRELALQHKPGDVFKITSLRGFHLVKIEDVMFDLSYTSKPQGRVQGRGLLPTPLKELMAKDKDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYMLGTIVKRIQKWALIHIFLINDFSKPPTSTPTNVKLRRLRSRVKCKLMALKSHEK
Sbjct:    1 MRHQGHSGRRRALWMVRGPVLVLILLAELLAHGIPLVQCFTALQRFDSRRTPAAVASDSYEIRRQHKHNYISCSATAQKLWQTSGAKTMEESMNLSLKDFKERIEAQRRKSVIAVRARHLLVEVKPLCDSLFEDVKKGAEFHALAAAISACSVTRDAGGDVGWIGMADEFMEDVLPRHVRELALQHKPGDVFKITSLRGFHLVKIEDVMFDLSYTSKPQGRVQGRGLLPTPLKELMAKDKDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYMLGTIVKRIQKWALIHIFLINDFSKPPTSTPTNVKLRRLRSRVKCKLMALKSHEK 729          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|922860626|gb|KOO28490.1| (tRNA-n - adenosine-37 thiotransferase enzyme [Chrysochromulina sp. CCMP291])

HSP 1 Score: 700.664 bits (1807), Expect = 0.000e+0
Identity = 340/595 (57.14%), Postives = 433/595 (72.77%), Query Frame = 0
Query:   82 QTSGAKTMEESMNLSLKDFKERIEAQRRKSVIAVRARHLLVEVKPLCDSLFEDVKKGAEFHALAAAISACSVTRDAGGDVGWIGMADEFMEDVLPRHVRELALQHKPGDVFKITSLRGFHLVKIEDVMFDLSYTSKPQGRVQGRGLLPTPLKELMAKDKDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYML 676
            +TSG    E ++ L+  D+   ++  R  +V AVR RH+LV+ + L   L + ++ G +F  LA A+S C+ TR+ GG+VGW    DE +++++PR VR  A+  KPGDV  + S  G H+V++ DV   L   S P+ R      LP                          MN+AD+ERM GQL ALGF   A + + A A VVV+NTCSIR+HAE+K+YS+LGP   RK+ G+++AIVVAGCVAQQEG+ ++ R PE+D+V+GPQYANRLGDLLE V +GNQ+VAT  THIMED+++P+R S + AWVN+IYGCNERCTYCVVPTTRG EQSRPR+++  E++ L   GYRE+TLLGQNID+WGRDL+P QKF+DLL  +G+  G+ R+RFVTSHPRYMS  V+DAVA  P +CEMFH+P QSGDDDILK M+RGYT ++++ +VERIR  LPDAA+T+D IVGFPGETE QFQNTLRLME VKFDQ+NTAAYSPRP+TPAA +EDQ+ + VK +RLQ IN+LAAEHA+ER  RYLGR  EVLVE R+ K P  VKGRNRQG PV FEG+I+EL GKLVPV I E  +Y L
Sbjct:   11 ETSGRSRAEVAVGLNTADWLREVDKTRSSAVTAVRVRHILVQTESLAAELRDQLRAGGDFGKLAEAVSGCAHTREKGGEVGWSATNDEHLDEIVPRDVRAAAMHMKPGDVAVLCSGLGQHVVQVVDVFQTLHIESAPRTRG-----LP-------------------------GMNSADAERMEGQLRALGF---AKATDPADAHVVVINTCSIREHAEEKLYSHLGPTAIRKRNGEDVAIVVAGCVAQQEGEELLRRIPEIDMVMGPQYANRLGDLLEGVFNGNQIVATAPTHIMEDLTQPQRSSTVCAWVNVIYGCNERCTYCVVPTTRGAEQSRPRDAIKAEVQALVEQGYREVTLLGQNIDSWGRDLSPSQKFADLLREIGQTAGLSRLRFVTSHPRYMSPRVIDAVAETPALCEMFHIPFQSGDDDILKAMARGYTAAQYVRLVERIRERLPDAAITADAIVGFPGETEEQFQNTLRLMEAVKFDQLNTAAYSPRPHTPAALWEDQVEEKVKKERLQIINRLAAEHALERRQRYLGRVEEVLVEMRNPKHPAQVKGRNRQGCPVFFEGDIDELLGKLVPVRIVEALAYSL 572          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|873235524|emb|CEM00604.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 668.692 bits (1724), Expect = 0.000e+0
Identity = 328/588 (55.78%), Postives = 431/588 (73.30%), Query Frame = 0
Query:  110 KSVIAVRARHLLVEVKPLCDSLFEDVKKG-AEFHALAAAISACSVTRDAGGDVGWIGMADEFMEDVLPRHVRELALQHKPGDVFKITSLRGFHLVKIEDVMFDLSYT-SKPQGRVQGRG--LLPTPLKELMAKD-----------KDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYMLGTIVKR 682
            ++V AVR  H+L+E + L +   E +++G  +F  LA   S C  T+   G VGW+ + D+F++ ++P  VRE A+  KPGD+  + S RG H+VK+EDVM  L+ T S+P+ ++ G G  L  + L  L  K            + ++   Y V+TMGC MN ADSERMAGQL +LG R    +++   AD+VV+NTCSIRD AEQKVYS LGP+  RK+ G ++ +VVAGCVAQQEG+ ++ R PE+DLV+GPQYANRLGDLLE+V +GNQVVATE T IMED +KPRR+S + AWVN+IYGCNE CTYCVVP TRG EQSRP ESV RE+EEL   G++E+TLLGQNID+WGRD+ PK+KFSDLLH V    G++R+RFVTSHPRY+S  VVDAVA  P++ E FH+P Q+GD+++L+ M RGYT  ++L +++RIR  +P+ A+++D+IVGFPGETE QF+ TL LM  VKFD + TAAYSPRP+TPAAT+ +Q+ DDVK DRL+RIN+LAA+HA ERN RYLGR  EVLVE R+VK+P  V GR R  R V F+G+I ELRG++VPV + EVR Y L   ++R
Sbjct:   45 RTVQAVRVSHILLETESLAELALERLRQGDVDFADLAEVASICQATKQDKGQVGWVSLKDDFLDPIMPLEVREAAMALKPGDMTTVRSGRGVHIVKVEDVMALLTPTASQPRSKMPGSGQLLAASGLSRLFKKTVGAADGLEGERERESEWRYFVDTMGCQMNKADSERMAGQLESLGAR---VTDDAKGADIVVLNTCSIRDKAEQKVYSALGPFAARKRSGKDVTLVVAGCVAQQEGERLLRRVPELDLVMGPQYANRLGDLLEDVANGNQVVATEPTFIMEDSTKPRRESSVAAWVNVIYGCNEHCTYCVVPNTRGVEQSRPMESVRREMEELGALGFKEVTLLGQNIDSWGRDMHPKRKFSDLLHHVADTPGVERIRFVTSHPRYISERVVDAVAEHPSLMEYFHIPFQAGDNEVLRNMRRGYTRERYLHVIDRIRRRIPEVAISADVIVGFPGETEEQFEQTLDLMRQVKFDCLITAAYSPRPHTPAATWPNQLPDDVKEDRLRRINELAAQHAYERNLRYLGRVEEVLVEERNVKNPTQVMGRTRGNRLVFFDGDIAELRGRMVPVRVTEVRPYSLTGRIER 629          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|1210520387|dbj|GAX20818.1| (tRNA-2-methylthio-N6-dimethylallyladenosine synthase [Fistulifera solaris])

HSP 1 Score: 648.662 bits (1672), Expect = 0.000e+0
Identity = 320/593 (53.96%), Postives = 421/593 (70.99%), Query Frame = 0
Query:  109 RKSVIAVRARHLLVEVKPLCDSLFEDVKKGA-EFHALAAAISACSVTRDAGGDVGWIGMADE----------------FMEDVLPRHVRE--LALQHKPGDVFKITSLRGFHLVKIEDVMFDL-SYTSKPQGRVQGRGLLPTPLKELMAKDKDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSY-MLGTIV 680
            R  + AVR  H+L+  + +  +   +++ G+  F  LA  +SAC+VTR   G++GW+ + +E                 +++  P+  RE  L +  KPGDV  + S  G+HLV++ DVM ++    S+ + R  G  LL     E + +D D   L Y +ETMGC MNTADSERM GQL  LG R    SEE    DV+V+NTCSIRDHAEQKVYSYLGP+  RK+ G+++ IVVAGCVAQQEG+A++ + PE+DLV+GPQYANR+GDLLE+V +GNQVVATEATHIMED +KPRR S + AWVN+IYGCNERC +C+VPTTRG EQSRP ES++ E+EEL   G++E+TLLGQNIDA+GRD+ PK+KFSDL+  VG + G++R+RFVTSHPRYMS+ VVDAVA  P  CE FH+P QSG + IL  M RG+T  K+L IVERIRS++PDA++T+D+IVGFPGETE  FQ++L LME V+FD V+TAAYSPRPNTPAAT EDQ+ D VK DRL RIN +    A+ER    +G+ +E+LVE R++++P  V GR RQG      G+I+ELRGK V   I   +++ ++G IV
Sbjct:   62 RLHLTAVRLHHILLATEEMAAASLHELRSGSVSFAELAEQVSACAVTRSKQGELGWVSVTEEPSTPNNTDDPPVSPNAHLDEFFPKEAREKLLLITTKPGDVVMVPSHLGYHLVQVVDVMANVRKMASQRKRRTNGSNLL-----EALRRDTD---LTYKMETMGCQMNTADSERMEGQLQDLGLR---PSEEGQNPDVIVLNTCSIRDHAEQKVYSYLGPHAKRKRNGEDVTIVVAGCVAQQEGEALLRKAPEIDLVMGPQYANRIGDLLEDVANGNQVVATEATHIMEDSTKPRRQSSVAAWVNVIYGCNERCAFCIVPTTRGVEQSRPVESIVAEVEELVAQGFKEVTLLGQNIDAYGRDMIPKRKFSDLIRIVGGIPGLERLRFVTSHPRYMSLGVVDAVAETPTACESFHIPFQSGSNRILAAMGRGHTREKYLYIVERIRSVIPDASITADVIVGFPGETEEDFQDSLALMEEVRFDNVHTAAYSPRPNTPAATMEDQVPDHVKKDRLSRINDVNKRIAVERRAALVGKTLEILVEERNIRNPIQVLGRTRQGFTCYMTGDIDELRGKTVQAEITSAKNFHLVGRIV 643          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|1210529658|dbj|GAX11752.1| (tRNA-2-methylthio-N6-dimethylallyladenosine synthase [Fistulifera solaris])

HSP 1 Score: 647.506 bits (1669), Expect = 0.000e+0
Identity = 320/594 (53.87%), Postives = 419/594 (70.54%), Query Frame = 0
Query:  109 RKSVIAVRARHLLVEVKPLCDSLFEDVKKGA-EFHALAAAISACSVTRDAGGDVGWIGMADE-----------------FMEDVLPRHVRE--LALQHKPGDVFKITSLRGFHLVKIEDVMFDL-SYTSKPQGRVQGRGLLPTPLKELMAKDKDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSY-MLGTIV 680
            R  + AVR  H+L+  + +  +   +++ G+  F  LA  +SAC VTR   G++GW+ + ++                  +++  PR  RE  L +  KPGDV  + S  G+HLV++ DVM ++    S+ + R  G  LL     E + +D D   L Y +ETMGC MNTAD+ERM GQL  LG R    SEE    DV+V+NTCSIRDHAEQKVYSYLGPY  RK+ G+++ IVVAGCVAQQEG+A++ + PE+DLV+GPQYANR+GDLLE+V +GNQVVATEATHIMED +KPRR S + AWVN+IYGCNERC +C+VPTTRG EQSRP ES++ E+EEL   G++E+TLLGQNIDA+GRD+ PK+KFSDL+  VG + G++R+RFVTSHPRYMS+ VVDAVA  P  CE FH+P QSG + IL  M RG+T  K+L IVERIRS++PDA++T+D+IVGFPGETE  FQ +L LME V+FD V+TAAYSPRPNTPAAT EDQ+ D VK DRL RIN +    A+ER    +G+ +E+LVE R++++P  V GR RQG      G+I+ELRGK V   I   +++ ++G IV
Sbjct:   66 RLHLTAVRLHHILLATEEMAAASLHELRSGSVSFAELAEQVSACVVTRPKQGELGWVSVTEDPSSSNSSAEDPPESPNAHLDEFFPREAREKLLLITTKPGDVVMVPSHLGYHLVQVVDVMANVRKMASQRKRRTNGSNLL-----EALRRDTD---LTYKMETMGCQMNTADAERMEGQLQDLGLR---PSEEGQNPDVIVLNTCSIRDHAEQKVYSYLGPYAKRKRNGEDVTIVVAGCVAQQEGEALLRKAPEIDLVMGPQYANRIGDLLEDVANGNQVVATEATHIMEDSTKPRRQSSVAAWVNVIYGCNERCAFCIVPTTRGVEQSRPVESIVAEVEELVAQGFKEVTLLGQNIDAYGRDMIPKRKFSDLIRIVGGIPGLERLRFVTSHPRYMSLGVVDAVAETPTACESFHIPFQSGSNRILAAMGRGHTREKYLYIVERIRSVIPDASITADVIVGFPGETEEDFQESLALMEEVRFDNVHTAAYSPRPNTPAATMEDQVPDHVKKDRLSRINDVNKRIAVERRAALVGKTLEILVEERNIRNPIQVLGRTRQGFTCYMTGDIDELRGKTVQAEITSAKNFHLVGRIV 648          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|397605674|gb|EJK59086.1| (hypothetical protein THAOC_20733 [Thalassiosira oceanica])

HSP 1 Score: 630.558 bits (1625), Expect = 0.000e+0
Identity = 320/627 (51.04%), Postives = 409/627 (65.23%), Query Frame = 0
Query:  112 VIAVRARHLLVEVKPLC-DSLFEDVKKGAEFHALAAAISACSVTRDAGGDVGWIGMADEF--------------MEDVLPRHVRELALQ--HKPGDVFKITSLRGFHL------------------------------VKIEDVMFDLSYTSKPQGRVQGRGLLPTPLKELMAKDKDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASSEEVAKA---------------DVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYML 676
            ++A+R  H+L   + L   +L +  K    F ++A A+S C+ TRD GG VGWI +A++F              +E +LPR  R+  L+   KPGD+  + S RG HL                              ++ E  M       +      G  L       L+     D  L Y +ETMGC MN ADSERM GQL +LG R     E V K+               DV+V+NTCSIRDHAEQKVYSYLGP+  RK+ G+++ I+VAGCVAQQEGQ+++ R PE+DLV+GPQYANR+ DLLE+V +GNQVVATEA+HIMED +KPRR S +  WVN+IYGCNERCTYC+VPTTRG EQSRP ES++ E+ EL   G++E+TLLGQNIDA+GRD+ PK+KFSDL+  VG + G++R+RFVTSHPRYMS+ VVDAVA  P  CE FH+P QSG + IL  M RG+T  KFL IVER+R+ LPDAA+T+D+IVGFPGETE  F +TL +ME VKFD VNTAAYSPRPNTPAAT+E+Q+ ++ K DRL+RIN+L  +HA ER  R +GR V+VLVE R+VK P  V GR   G  V F+G+I+ELRG L+ V I     + L
Sbjct:  124 LLALRLNHILFASEELAKQTLVKLTKAEWNFESMAEAVSNCAETRDEGGAVGWINLAEDFDFDEPSESRNPNDHLELILPRSARKEILETPSKPGDILMVQSGRGVHLVQVVDVMVDVRKLSYVKERRKKKKAKETIVIQNEMEMGSEKSAQRKDSHESGTNLAGVLGGALVEDGVVDVDLTYKIETMGCQMNQADSERMEGQLMSLGIRPLLEDETVTKSSGLFEETVKESKRKPDVIVLNTCSIRDHAEQKVYSYLGPHAKRKRDGEDVTIIVAGCVAQQEGQSLLRRVPEIDLVMGPQYANRISDLLEDVANGNQVVATEASHIMEDATKPRRQSQVCGWVNVIYGCNERCTYCIVPTTRGVEQSRPVESIVEEVTELVGQGFKEVTLLGQNIDAYGRDMKPKRKFSDLMRIVGSIPGLERLRFVTSHPRYMSLGVVDAVADTPTACEYFHIPFQSGSNAILNAMGRGHTREKFLSIVERVRNRLPDAAITADVIVGFPGETEQDFLDTLDIMEQVKFDSVNTAAYSPRPNTPAATWENQLDEETKQDRLRRINELNLKHATERRARMMGRVVKVLVEERNVKVPTQVMGRTTHGYIVYFDGDIDELRGLLINVKIDTTEKFYL 750          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|551647578|ref|XP_005826573.1| (hypothetical protein GUITHDRAFT_96633 [Guillardia theta CCMP2712] >gi|428170670|gb|EKX39593.1| hypothetical protein GUITHDRAFT_96633 [Guillardia theta CCMP2712])

HSP 1 Score: 620.542 bits (1599), Expect = 0.000e+0
Identity = 282/425 (66.35%), Postives = 360/425 (84.71%), Query Frame = 0
Query:  252 MGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYML 676
            MGC MN+ADSERMAGQL A+G    A  E+ +KA+VV+ NTCSIRDHAEQKVYSY+GP  +RK+ G+N+A++VAGCVAQQEG+ ++ R PE+D+V+GPQYANR+GDLLE+V++GNQVVATEA  +MED ++PRR+S++ AWVN+IYGCNERCTYCVVPTTRG EQSRP+ES+ +E+EEL R GYRE+TLLGQNIDAWGRD+ PKQ+FS+LL     VE ++R+RFVTSHPRYMS++VV+ VA    +C+ FH+P QSGDD++L++M RG+T+ ++L+IV+RIR L PDAA+T+D IVGFPGETE QF+N+LRLME VKFD VNTAAYSPRPNTPAAT+++QI ++VKS RLQ+IN+L  +HA ER+ RYLGR ++VLVE R+VK P  VKGR  QGRPV  EGNI+EL+GK+VPV I E+ +Y L
Sbjct:    1 MGCQMNSADSERMAGQLEAMGM---AKVEDPSKANVVIYNTCSIRDHAEQKVYSYIGPQADRKRNGENVALIVAGCVAQQEGEKLLRRVPELDMVMGPQYANRIGDLLEDVVNGNQVVATEAAPMMEDSTRPRRESEVTAWVNVIYGCNERCTYCVVPTTRGVEQSRPKESIRKEMEELGRKGYREVTLLGQNIDAWGRDMEPKQRFSELLEEAATVEQVERIRFVTSHPRYMSLSVVETVAKHAKLCKCFHIPFQSGDDEVLRRMGRGHTIEQYLKIVKRIRELCPDAAITADCIVGFPGETEEQFENSLRLMEEVKFDVVNTAAYSPRPNTPAATWDNQIPEEVKSVRLQKINELGKQHAYERSQRYLGRVMDVLVEERNVKRPSQVKGRIEQGRPVYIEGNIDELKGKIVPVEIIEIGAYYL 422          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|224014702|ref|XP_002297013.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968393|gb|EED86741.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 602.823 bits (1553), Expect = 0.000e+0
Identity = 287/430 (66.74%), Postives = 348/430 (80.93%), Query Frame = 0
Query:  252 MGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEV-RSYMLGTIV 680
            MGC MN ADSER+ GQL +LG R     E   K DV+V+NTCSIRDHAEQKVYSYLGP+  RK+ G+++ I+VAGCVAQQEGQ+++ R PE+DLV+GPQYANR+ DLLE+V +GNQVVATEA+HIMED +KPRR SD+ AWVN+IYGCNERCTYC+VPTTRG EQSRP ES++ E+++L  SGY+E+TLLGQNIDA+GRD+ PK+KFSDLL  VG V+G++R+RFVTSHPRYMS+ VVDAVA  P  CE FHVP QSG +DILK M RG+T  KFL IV+RIR  LPDAA+T+D+IVGFPGETE  FQ+TL LME V FD VNTAAYSPRPNTPA+T+E+Q+S++VK DRLQRIN+L   HA ER  R +GR VEVLVE R+VK P  V GR R G  V  EG+I +LRGKLV V +++  R Y+ G+IV
Sbjct:    1 MGCQMNLADSERIEGQLMSLGIRPLGEDE---KPDVIVLNTCSIRDHAEQKVYSYLGPHAKRKRAGEDITIIVAGCVAQQEGQSLLRRIPEIDLVMGPQYANRISDLLEDVANGNQVVATEASHIMEDSTKPRRGSDVCAWVNVIYGCNERCTYCIVPTTRGVEQSRPVESIVDEVKKLVESGYKEVTLLGQNIDAYGRDMLPKRKFSDLLRIVGGVDGLERLRFVTSHPRYMSLGVVDAVAETPTACEYFHVPFQSGSNDILKAMGRGHTREKFLGIVDRIRQRLPDAAITADVIVGFPGETEQDFQDTLDLMETVVFDNVNTAAYSPRPNTPASTWENQLSEEVKQDRLQRINELNLRHASERRARMMGRVVEVLVEERNVKVPTQVMGRTRHGYIVYCEGDIGQLRGKLVNVKVEKCQRYYLAGSIV 427          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|551628923|ref|XP_005794442.1| (hypothetical protein EMIHUDRAFT_308277 [Emiliania huxleyi CCMP1516] >gi|485649107|gb|EOD42013.1| hypothetical protein EMIHUDRAFT_308277 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 594.734 bits (1532), Expect = 0.000e+0
Identity = 283/433 (65.36%), Postives = 348/433 (80.37%), Query Frame = 0
Query:  249 VETMGCAMNTADSERMAGQLSALGFREAASSEEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQ-----SRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYML 676
            +++MGC MNTAD+ERM GQL +LGF   A +EE   A VVV+NTCSIR+HAE KVYSYLGP+  RK+ G++LAIVVAGCVAQQEG+A++ R PE+D+V+GPQYANRLGDLLE V +GNQ+  T   HIMED ++P+R S + AWVN+IYGCNERCTYCVVPTTRG+EQ     SRPR++V  EIE L   GYRE+TLLGQNID+WG DL+PKQ F+DLL  VG V+G+ R+RFVTSHPRYMS  V+DAVA +P +C MFH+P QSGDD IL+ M RG+T +++ EIV  IR+ LPDAA+T+D IVGFPGETE QF+NTL+LM  V+FDQ+NTAAYSPRP+TPAA + DQ+ + VK +RL+RIN+LAAEHA+ER  RYLGR  EVLVE R+ + P  VKGRN QG PV FEG+I+EL+G+LVPV I E R Y L
Sbjct:    1 MDSMGCQMNTADAERMEGQLRSLGF---ARAEEGTPAQVVVLNTCSIREHAEAKVYSYLGPHAARKRAGEDLAIVVAGCVAQQEGEALLRRVPEIDMVMGPQYANRLGDLLEGVFNGNQIAPT---HIMEDPTQPQRSSTVCAWVNVIYGCNERCTYCVVPTTRGSEQRGSEQSRPRDAVRAEIEALVAEGYREVTLLGQNIDSWGSDLSPKQSFADLLRDVGGVDGLARMRFVTSHPRYMSPRVIDAVAEVPALCPMFHIPFQSGDDGILRDMGRGHTAARYREIVHNIRTRLPDAAITADAIVGFPGETEEQFENTLQLMRDVRFDQINTAAYSPRPHTPAAVWGDQVEEGVKKERLRRINELAAEHALERRQRYLGRVEEVLVEKRNERHPAQVKGRNPQGCPVFFEGDIDELKGQLVPVRIVEARPYSL 427          
BLAST of EWM22418.1 vs. NCBI_GenBank
Match: gi|219114795|ref|XP_002178193.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409928|gb|EEC49858.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0
Identity = 278/440 (63.18%), Postives = 344/440 (78.18%), Query Frame = 0
Query:  238 KDKDDAALVYAVETMGCAMNTADSERMAGQLSALGFREAASS-EEVAKADVVVVNTCSIRDHAEQKVYSYLGPYVNRKKRGDNLAIVVAGCVAQQEGQAIVSRFPEVDLVIGPQYANRLGDLLEEVMDGNQVVATEATHIMEDVSKPRRDSDIRAWVNIIYGCNERCTYCVVPTTRGTEQSRPRESVIREIEELARSGYREITLLGQNIDAWGRDLTPKQKFSDLLHAVGRVEGIKRVRFVTSHPRYMSMNVVDAVASIPNMCEMFHVPVQSGDDDILKKMSRGYTVSKFLEIVERIRSLLPDAAVTSDIIVGFPGETEAQFQNTLRLMEIVKFDQVNTAAYSPRPNTPAATYEDQISDDVKSDRLQRINKLAAEHAMERNHRYLGREVEVLVESRHVKDPRLVKGRNRQGRPVLFEGNIEELRGKLVPVLIKEVRSYML 676
            ++KD + L Y +ETMGC MN ADSER+ GQL  LG R      ++  + DVV++NTCSIRDHAEQKVYSY+GP+  RK+ G+++ I+VAGCVAQQEG+A++ R PEVDLV+GPQYANR+GDLLE+V +GNQVVATEA+HIMED +KPRR S + AWVN+IYGCNERCT+C+VPTTRG EQSRP ES++RE+ EL   G++EITLLGQNIDA+GRD+ PK+KFSDL+  VG + G+ R+RFVTSHPRYMS+ VVD+VA  P  CE FH+P QSG ++IL  M RG+T  K+L IV+RIRS +PDAA+T+D+IVGFPGETE QF++TL LM  V FD VNTAAYSPRPNTPAA ++DQ+ D VK +RLQRIN L  EHA +R  R  GR VE+LVE R+V+ P  V GR R G  V  +G I+ELRGKLV V I     Y L
Sbjct:    6 ENKDISDLTYKLETMGCQMNMADSERIEGQLQGLGIRPLDPDVDKNKQPDVVILNTCSIRDHAEQKVYSYIGPHAKRKRDGEDVTIIVAGCVAQQEGEALLRRVPEVDLVMGPQYANRIGDLLEDVSNGNQVVATEASHIMEDSTKPRRQSTVAAWVNVIYGCNERCTFCIVPTTRGVEQSRPAESIVREVTELVEQGFKEITLLGQNIDAYGRDMIPKRKFSDLIRIVGEIPGLDRLRFVTSHPRYMSLGVVDSVAETPAACECFHIPFQSGSNEILAAMGRGHTREKYLHIVDRIRSRIPDAAITADVIVGFPGETEEQFEDTLSLMREVVFDSVNTAAYSPRPNTPAAVWDDQVDDAVKQNRLQRINALNLEHAAQRRARMKGRTVEILVEERNVRVPTQVMGRTRHGYIVYCDGEIDELRGKLVNVEIDTCEQYYL 445          
The following BLAST results are available for this feature:
BLAST of EWM22418.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102924|gb|EWM22418.1|0.000e+0100.00adenosine trna methylthiotransferase [Nannochlorop... [more]
gi|922860626|gb|KOO28490.1|0.000e+057.14tRNA-n - adenosine-37 thiotransferase enzyme [Chry... [more]
gi|873235524|emb|CEM00604.1|0.000e+055.78unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210520387|dbj|GAX20818.1|0.000e+053.96tRNA-2-methylthio-N6-dimethylallyladenosine syntha... [more]
gi|1210529658|dbj|GAX11752.1|0.000e+053.87tRNA-2-methylthio-N6-dimethylallyladenosine syntha... [more]
gi|397605674|gb|EJK59086.1|0.000e+051.04hypothetical protein THAOC_20733 [Thalassiosira oc... [more]
gi|551647578|ref|XP_005826573.1|0.000e+066.35hypothetical protein GUITHDRAFT_96633 [Guillardia ... [more]
gi|224014702|ref|XP_002297013.1|0.000e+066.74predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|551628923|ref|XP_005794442.1|0.000e+065.36hypothetical protein EMIHUDRAFT_308277 [Emiliania ... [more]
gi|219114795|ref|XP_002178193.1|0.000e+063.18predicted protein [Phaeodactylum tricornutum CCAP ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8235rna8235Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications