EWM22488.1, cds8203 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|585102994|gb|EWM22488.1| (h - or na -translocating f- v-type and a-type atpase (f-atpase) superfamily [Nannochloropsis gaditana]) HSP 1 Score: 529.635 bits (1363), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAAAAGARSSKIEGGLVKDVTAQYDTAGDSDIVF 261 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAAAAGARSSKIEGGLVKDVTAQYDTAGDSDIVF Sbjct: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAAAAGARSSKIEGGLVKDVTAQYDTAGDSDIVF 261
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|1214704152|gb|OWZ16053.1| (H - or Na -translocating F-type, V-type and A-type ATPase (F-ATPase) [Phytophthora megakarya]) HSP 1 Score: 297.745 bits (761), Expect = 1.740e-98 Identity = 150/265 (56.60%), Postives = 196/265 (73.96%), Query Frame = 0 Query: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAAAAGARSSKIEGGLV----KDVTAQYDTAGDSDIVF 261 MS VAPTRMALT +KTKRVGAKKG+ELLKKK+DALK+RF+ ++++I +TK +M+ + S AFFSLTQAQYAAGDFR +V++ TA +R DNVAGVKLPVF + E+ S+ +N+GLA GG +I+ C+EKF V L L++LASLQTSF+TLDEALKVTNRRVNAL+NVTIPRIE ++YI RELDELEREDF R+KKVQ +K+ + A A+E+ +A ++G V +D+ AQY+ + D+D+VF Sbjct: 1 MSSVQVAPTRMALTTFKTKRVGAKKGFELLKKKADALKMRFQAMLREIQKTKMSMSTEASEAFFSLTQAQYAAGDFRNKVIESVSTAEIRTQNRIDNVAGVKLPVFTEVEV-----SREKSENIGLAGGGGKIQNCREKFRVLLRALIKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIEKTISYITRELDELEREDFVRIKKVQANKQDHEKAVLASEKEAAEAKKSSGTAVDDDPFADVVASDRDILAQYEPSADADVVF 260
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|675199335|ref|XP_008908552.1| (hypothetical protein PPTG_13862 [Phytophthora parasitica INRA-310] >gi|566019805|gb|ETI42716.1| hypothetical protein F443_12246 [Phytophthora parasitica P1569] >gi|567957135|gb|ETK82743.1| hypothetical protein L915_11968 [Phytophthora parasitica] >gi|567985784|gb|ETL36121.1| hypothetical protein L916_11895 [Phytophthora parasitica] >gi|568015181|gb|ETL89358.1| hypothetical protein L917_11734 [Phytophthora parasitica] >gi|568045471|gb|ETM42626.1| hypothetical protein L914_11799 [Phytophthora parasitica] >gi|568091226|gb|ETN06050.1| hypothetical protein PPTG_13862 [Phytophthora parasitica INRA-310] >gi|570323393|gb|ETO71341.1| hypothetical protein F444_12349 [Phytophthora parasitica P1976] >gi|570947197|gb|ETP12454.1| hypothetical protein F441_12227 [Phytophthora parasitica CJ01A1] >gi|570979663|gb|ETP40573.1| hypothetical protein F442_12158 [Phytophthora parasitica P10297]) HSP 1 Score: 296.204 bits (757), Expect = 7.360e-98 Identity = 151/265 (56.98%), Postives = 195/265 (73.58%), Query Frame = 0 Query: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAAAAGARSSKIEGGLV----KDVTAQYDTAGDSDIVF 261 MS VAPTRMALT +K KRVGAKKG+ELLKKK+DALK+RF+ ++++I +TK +M+ + S AFFSLTQAQYAAGDFR +V++ TA +R DNVAGVKLPVF + E+ S+ DN+GLA GG +I+ C+EKF V L L++LASLQTSF+TLDEALKVTNRRVNAL+NVTIPRIE ++YI RELDELEREDF R+KKVQ +K+ + A A E+ +A ++GA V +D+ AQY+ + D+D+VF Sbjct: 1 MSSVQVAPTRMALTTFKGKRVGAKKGFELLKKKADALKMRFQAMLREIQKTKMSMSTEASEAFFSLTQAQYAAGDFRNKVIESVSTAEIRTQNRIDNVAGVKLPVFTEVEV-----SREKSDNIGLAGGGGKIQNCREKFRVLLRALIKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIEKTISYITRELDELEREDFVRIKKVQANKQDHEKAILAREKEAAEAKKSSGAAVDDDPFADVVASDRDILAQYEPSADADVVF 260
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|695448661|ref|XP_009535039.1| (hypothetical protein PHYSODRAFT_361923 [Phytophthora sojae] >gi|348670356|gb|EGZ10178.1| hypothetical protein PHYSODRAFT_361923 [Phytophthora sojae]) HSP 1 Score: 295.434 bits (755), Expect = 1.128e-97 Identity = 152/266 (57.14%), Postives = 195/266 (73.31%), Query Frame = 0 Query: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAA---EAAEEALHKAAAAAGARSSKIEGGLV--KDVTAQYDTAGDSDIVF 261 MS VAPTRMALT++K KRVGAKKG+ELLKKK+DALK+RF+ ++++I +TK +M+ + S AFFSLTQAQYAAGDFR +V++ TA +R DNVAGVKLPVF + E+ S+ +N+GLA GG +I+ C+EKF V L L++LASLQTSF+TLDEALKVTNRRVNAL+NVTIPRIE ++YI RELDELEREDF R+KKVQ +K+ Q A EAAE A A+A + +D+ AQY+ + D+D+VF Sbjct: 1 MSSVQVAPTRMALTIFKGKRVGAKKGFELLKKKADALKMRFQAMLREIQKTKMSMSTEASEAFFSLTQAQYAAGDFRNKVIESVSTAEIRTQNRIDNVAGVKLPVFTEVEV-----SREKSENIGLAGGGGKIQNCREKFRVLLRALIKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIEKTISYITRELDELEREDFVRIKKVQANKQEHQKALLAREAAEGAKTDKPASASLDDDPFADVVASDRDILAQYEPSADADVVF 261
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|970650922|gb|KUF89845.1| (H-or Na-translocating F-type [Phytophthora nicotianae]) HSP 1 Score: 295.049 bits (754), Expect = 1.670e-97 Identity = 151/265 (56.98%), Postives = 194/265 (73.21%), Query Frame = 0 Query: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAAAAGARSSKIEGGLV----KDVTAQYDTAGDSDIVF 261 MS VAPTRMALT +K KRVGAKKG+ELLKKK+DALK+RF+ ++++I +TK +M+ + S AFFSLTQAQYAAGDFR +V+ TA +R DNVAGVKLPVF + E+ S+ DN+GLA GG +I+ C+EKF V L L++LASLQTSF+TLDEALKVTNRRVNAL+NVTIPRIE ++YI RELDELEREDF R+KKVQ +K+ + A A E+ +A ++GA V +D+ AQY+ + D+D+VF Sbjct: 1 MSSVQVAPTRMALTTFKGKRVGAKKGFELLKKKADALKMRFQAMLREIQKTKMSMSTEASEAFFSLTQAQYAAGDFRNKVIXSVSTAEIRTQNRIDNVAGVKLPVFTEVEV-----SREKSDNIGLAGGGGKIQNCREKFRVLLRALIKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIEKTISYITRELDELEREDFVRIKKVQANKQDHEKAILAREKEAAEAKKSSGAAVDDDPFADVVASDRDILAQYEPSADADVVF 260
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|301113864|ref|XP_002998702.1| (H - or Na -translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily [Phytophthora infestans T30-4] >gi|262112003|gb|EEY70055.1| H - or Na -translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily [Phytophthora infestans T30-4]) HSP 1 Score: 293.508 bits (750), Expect = 6.333e-97 Identity = 149/265 (56.23%), Postives = 195/265 (73.58%), Query Frame = 0 Query: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAAAAGARSSKIEGGLV----KDVTAQYDTAGDSDIVF 261 MS VAPTRMALT +K KRVGAKKG+ELLKKK+DALK+RF+ ++++I +TK +M+ + S AFFSLTQAQYAAGDFR +V++ TA +R DNVAGVKLPVF + E+ S+ +N+GLA GG +I+ C+EKF V L L++LASLQTSF+TLDEALKVTNRRVNAL+NVTIPRIE ++YI RELDELEREDF R+KKVQ +K+ + A A E+ ++ ++GA V +D+ AQY+ + D+D+VF Sbjct: 1 MSSVQVAPTRMALTTFKGKRVGAKKGFELLKKKADALKMRFQAMLREIQKTKMSMSTEASEAFFSLTQAQYAAGDFRNKVIESVSTAEIRTQNRIDNVAGVKLPVFTEVEV-----SREKSENIGLAGGGGKIQNCREKFRVLLRALIKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIEKTISYITRELDELEREDFVRIKKVQANKQDHEKAVLAREKEAAESKKSSGAAVDDDPFADVVASDRDILAQYEPSADADVVF 260
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|298706868|emb|CBJ25832.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 282.337 bits (721), Expect = 1.634e-92 Identity = 158/273 (57.88%), Postives = 187/273 (68.50%), Query Frame = 0 Query: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQA-QYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAAAAG---------ARSSKIEGGLVKDVTA--QYDTAGDSDIVF 261 MS VAPTRMAL MYK K +GAKKGYELLKKKSDALK RFR I K I K M + ++AFFSLTQA QY AGDFR +VL A+VR TDNVAGVKLPVF YE SE K DN+GLA GG+++ C++K+ ++ NL++LASLQTSF+T+DEALKVTNRRVNALENVTIPR+E +++YINRELDELEREDFTRLKKV KR A A E+AL AAA A S+ + GG D T ++DT D+ F Sbjct: 1 MSAQQVAPTRMALQMYKGKLLGAKKGYELLKKKSDALKARFRKIAKQIHELKQVMREDAATAFFSLTQAAQYVAGDFRGKVLDTPRPAAVRCRARTDNVAGVKLPVFESYETGSEAK-----DNIGLAGGGQKVGQCRDKYKAWVENLIKLASLQTSFVTMDEALKVTNRRVNALENVTIPRMEGVISYINRELDELEREDFTRLKKVVEKKREAA----AREQALKNELAAANKLLETDEALAASAAVSGG---DDTMLDEFDTQEQGDVYF 261
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|698798000|ref|XP_009832029.1| (hypothetical protein H257_07984 [Aphanomyces astaci] >gi|574112957|gb|ETV78448.1| hypothetical protein H257_07984 [Aphanomyces astaci]) HSP 1 Score: 281.182 bits (718), Expect = 4.954e-92 Identity = 149/263 (56.65%), Postives = 192/263 (73.00%), Query Frame = 0 Query: 1 MSGAIVAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDR-DNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAE-EALHKAAAAAGARSSKIEGGLVKDVTAQYDTAGDSDIVF 261 MS V PTRM LT YK KRV AKKG+ELLKKK+DALK+RF+ ++++I +TK M+ + S AFFSL+QAQYAAGDFR +V++ TA +R+ DNVAGVKLPVF +EV++ D+ +N+GL GG +I+ C+EKF V L LV+LASLQTSF+TLDEALKVTNRRVNAL+NVTIPRI+ ++ YI RELDELEREDF R+KKVQ +K A EAA+ EAL + AA A + +D+ A ++ A D+D+VF Sbjct: 1 MSTVQVPPTRMNLTTYKAKRVAAKKGFELLKKKADALKMRFQLMLREIQKTKMAMSQEASDAFFSLSQAQYAAGDFRHKVVESVTTAEIRLENRIDNVAGVKLPVF------TEVETSRDKAENIGLTGGGGKIQNCREKFRVLLKALVKLASLQTSFVTLDEALKVTNRRVNALDNVTIPRIDKVIDYIVRELDELEREDFVRIKKVQANK-IEFAKEEAAKLEALVASGAAVPAAKHVLPSD--EDIMAAFEPAADADVVF 254
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|325188906|emb|CCA23436.1| (H or Na translocating Ftype putative [Albugo laibachii Nc14]) HSP 1 Score: 281.567 bits (719), Expect = 5.527e-92 Identity = 147/280 (52.50%), Postives = 195/280 (69.64%), Query Frame = 0 Query: 1 MSGAI-VAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKVQGSKRTAQAAAEAAEEALHKAAA--------AAGARSSKIE--------GGLV--KDVTAQYDTAGDSDIVF 261 MS ++ VAPTRM+LT+YKTKRVGAKKG+ELLKKK+DALK+RF+ ++++I +TK M+ + + AFFSLTQAQYAAGDFR +V++ TA +R+ DNVAGVKLPVF + E+ S+ DN+GL+ GG +I+ C+EKF L+ L++LASLQTSF+TLDEALKVTNRRVNAL+NVTIPRIE ++YI+RELDELEREDF R+KKVQ +K Q + A K + G ++ G + +D+ A Y+ A D DI+F Sbjct: 1 MSSSVQVAPTRMSLTIYKTKRVGAKKGFELLKKKADALKMRFQAMLREIQKTKTAMSHEAAEAFFSLTQAQYAAGDFRNKVIESVTTAEIRMRNRIDNVAGVKLPVFTEVEV-----SRDKSDNIGLSGGGGKIQLCREKFRTLLSALIKLASLQTSFLTLDEALKVTNRRVNALDNVTIPRIETTISYISRELDELEREDFVRIKKVQANKILQQKQEILNKNAQQKTPTDITEVLVHSGGIPNNTFNPFDQDDSFGNVASDRDIMAPYEIAADVDIIF 275
BLAST of EWM22488.1 vs. NCBI_GenBank
Match: gi|676395079|ref|XP_009040817.1| (hypothetical protein AURANDRAFT_32568 [Aureococcus anophagefferens] >gi|323448533|gb|EGB04430.1| hypothetical protein AURANDRAFT_32568 [Aureococcus anophagefferens]) HSP 1 Score: 280.411 bits (716), Expect = 5.656e-92 Identity = 140/209 (66.99%), Postives = 167/209 (79.90%), Query Frame = 0 Query: 6 VAPTRMALTMYKTKRVGAKKGYELLKKKSDALKVRFRDIMKDIARTKGNMADQGSSAFFSLTQAQYAAGDFRQQVLQGSLTASVRVHTHTDNVAGVKLPVFRQYELQSEVKSKSDRDNLGLAQGGRQIKACKEKFTVFLTNLVRLASLQTSFITLDEALKVTNRRVNALENVTIPRIEAILAYINRELDELEREDFTRLKKV--QGSKR 212 V PTRMAL YK K+ GA KG++LLKKK+DALK RFRDI K+I +TKG M++ S+A+FSLT AQYAAGDF+ +VL+G+ ASVRV TDN+AGVK+PVFRQ++ +E +N+GLA GGR+I CKEKFT L LV+LASLQTSF+T+DEALKVTNRRVNALENVT+PRIE L+YI ELDELEREDFTRLKKV Q SKR Sbjct: 5 VPPTRMALQTYKGKKAGASKGHQLLKKKADALKARFRDIAKEIYKTKGTMSESCSTAYFSLTAAQYAAGDFKTKVLEGNFVASVRVTGQTDNIAGVKIPVFRQFDTGAE-----HLENIGLAGGGRKIAECKEKFTNLLAVLVKLASLQTSFVTMDEALKVTNRRVNALENVTLPRIEKTLSYITSELDELEREDFTRLKKVKDQNSKR 208 The following BLAST results are available for this feature:
BLAST of EWM22488.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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