EWM30589.1, cds82 (CDS) Nannochloropsis gaditana

Overview
NameEWM30589.1
Unique Namecds82
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:228609..228704 +
Alignment locationCM002455.1:228935..229049 +
Alignment locationCM002455.1:229262..229431 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30589.1
ProductBolA protein
Orig transcript idgnl|cribi|Naga_100033g6.8428.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:228609..228704 +
CM002455.1supercontigCM002455.1:228935..229049 +
CM002455.1supercontigCM002455.1:229262..229431 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR002634BolA
Homology
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|585113256|gb|EWM30589.1| (BolA protein [Nannochloropsis gaditana])

HSP 1 Score: 261.922 bits (668), Expect = 1.008e-88
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query:    1 MGETPVFLTRGSPQGRRNPKSPDIARGKTQREEEFDMSATPHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKKC 126
            MGETPVFLTRGSPQGRRNPKSPDIARGKTQREEEFDMSATPHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKKC
Sbjct:    1 MGETPVFLTRGSPQGRRNPKSPDIARGKTQREEEFDMSATPHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKKC 126          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|551656841|ref|XP_005831193.1| (bola-like protein [Guillardia theta CCMP2712] >gi|428175322|gb|EKX44213.1| bola-like protein [Guillardia theta CCMP2712])

HSP 1 Score: 105.916 bits (263), Expect = 1.513e-27
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 0
Query:   44 ITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQ 119
            ITP  I++KLT+AL A  V+A+D+SDGCG KF IL VSP F+G PL++RHRAV+AAL KE   IHA+TLKCLTP Q
Sbjct:    6 ITPGLIENKLTQALDATLVKAEDLSDGCGMKFSILIVSPRFDGMPLVERHRAVHAALEKETPDIHALTLKCLTPQQ 81          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|970884887|ref|XP_015127104.1| (PREDICTED: bolA-like protein 2 [Diachasma alloeum])

HSP 1 Score: 98.9821 bits (245), Expect = 9.934e-25
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0
Query:   45 TPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQW 120
            T   I+SKL + L+A  VE +D SDGCGAKF +L VS  FEG+PLLQRHR VNAAL +EL+ IHA + K LTP QW
Sbjct:    4 TEEYIRSKLIKELEASHVEVEDQSDGCGAKFAVLIVSDKFEGKPLLQRHRLVNAALEEELKDIHAFSQKTLTPEQW 79          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|919089373|ref|XP_013381701.1| (PREDICTED: bolA-like protein 2 [Lingula anatina])

HSP 1 Score: 98.5969 bits (244), Expect = 1.328e-24
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0
Query:   41 PHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKK 125
            PH  T  +I+ KL +AL+A ++E +D+SDGCGAKF+ + VS  FEG+PLLQRHR VN+ L +E++ IHA + K LTP QW++ ++
Sbjct:    2 PH--TADEIKDKLQKALEASYLEVEDLSDGCGAKFQAIIVSKKFEGKPLLQRHRLVNSVLEEEMKSIHAFSQKTLTPEQWEKQQQ 84          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|919089423|ref|XP_013381728.1| (PREDICTED: bolA-like protein 2 [Lingula anatina])

HSP 1 Score: 98.5969 bits (244), Expect = 1.449e-24
Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0
Query:   41 PHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKK 125
            PH  T  +I+ KL +AL+A ++E +D+SDGCGAKF+ + VS  FEG+PLLQRHR VN+ L +E++ IHA + K LTP QW++ ++
Sbjct:    2 PH--TADEIKEKLQKALEASYLEVEDLSDGCGAKFQAIIVSKKFEGKPLLQRHRLVNSVLEEEMKSIHAFSQKTLTPEQWEKQQQ 84          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|1173948044|gb|OQR96202.1| (hypothetical protein ACHHYP_16540 [Achlya hypogyna])

HSP 1 Score: 98.2117 bits (243), Expect = 2.177e-24
Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0
Query:   43 IITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETK 124
            ++TPA+I  KL  ALQ  +V+ +D SDGCG KF I+ VSP FEG  LLQR RAVN AL +E+  IHA+ +K  TP Q+++ K
Sbjct:    1 MVTPAEISQKLESALQVTYVQVEDNSDGCGTKFSIIVVSPLFEGMGLLQRQRAVNDALKEEMSSIHALQMKTWTPAQFEQKK 82          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|443709447|gb|ELU04119.1| (hypothetical protein CAPTEDRAFT_17942 [Capitella teleta])

HSP 1 Score: 97.4413 bits (241), Expect = 3.877e-24
Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 0
Query:   45 TPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKK 125
            TPA+++ KL   L A  V+ +D+SDGCGAKF  LTVS  FEG+ LLQRHR VN  LA+EL+ IHA + K LTP QW+  K+
Sbjct:    4 TPAELEEKLRTGLDATHVKIEDLSDGCGAKFSCLTVSSQFEGKALLQRHRLVNGILAEELKTIHAFSQKTLTPQQWESLKQ 84          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|826466512|ref|XP_012535259.1| (PREDICTED: protein BOLA2 isoform X2 [Monomorium pharaonis])

HSP 1 Score: 96.6709 bits (239), Expect = 8.266e-24
Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 0
Query:   48 QIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETK 124
            QI+ K+TE L+A+ VE  D SDGCGAKF ++ VS  F+G+PLL RHR V   L +EL+ IHAI+L  LTP QW++TK
Sbjct:    7 QIKDKVTEGLKALHVEVVDQSDGCGAKFSVVVVSDLFQGKPLLSRHRLVYGILEEELKTIHAISLTTLTPEQWEKTK 83          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|172051152|gb|ACB70351.1| (BolA-related protein [Ornithodoros coriaceus])

HSP 1 Score: 96.2857 bits (238), Expect = 1.023e-23
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   45 TPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETK 124
            T   ++ KL + L  V VE +D+SDGCGAKF  + VSP FEG+PLL+RHR VN  L+KELE IHA + K LTP QW   K
Sbjct:    5 TKEYLEEKLRKELDTVHVELEDISDGCGAKFNAVIVSPKFEGKPLLERHRMVNTVLSKELEAIHAFSQKTLTPEQWQAKK 84          
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|1069821833|ref|XP_018333800.1| (PREDICTED: bolA-like protein 2 isoform X2 [Agrilus planipennis])

HSP 1 Score: 95.9005 bits (237), Expect = 1.451e-23
Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 0
Query:   45 TPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKK 125
            T   I+ KL + LQA +VE  D SDGCG KF    VS  FEG+PLLQRHR VN+ L +EL+ IHA + K  TP QW+E KK
Sbjct:    4 TEKYIKDKLIKELQATYVEVIDESDGCGGKFSCTIVSDKFEGKPLLQRHRLVNSVLQEELKSIHAFSQKTYTPEQWEEEKK 84          
The following BLAST results are available for this feature:
BLAST of EWM30589.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113256|gb|EWM30589.1|1.008e-88100.00BolA protein [Nannochloropsis gaditana][more]
gi|551656841|ref|XP_005831193.1|1.513e-2765.79bola-like protein [Guillardia theta CCMP2712] >gi|... [more]
gi|970884887|ref|XP_015127104.1|9.934e-2561.84PREDICTED: bolA-like protein 2 [Diachasma alloeum][more]
gi|919089373|ref|XP_013381701.1|1.328e-2451.76PREDICTED: bolA-like protein 2 [Lingula anatina][more]
gi|919089423|ref|XP_013381728.1|1.449e-2451.76PREDICTED: bolA-like protein 2 [Lingula anatina][more]
gi|1173948044|gb|OQR96202.1|2.177e-2453.66hypothetical protein ACHHYP_16540 [Achlya hypogyna... [more]
gi|443709447|gb|ELU04119.1|3.877e-2456.79hypothetical protein CAPTEDRAFT_17942 [Capitella t... [more]
gi|826466512|ref|XP_012535259.1|8.266e-2457.14PREDICTED: protein BOLA2 isoform X2 [Monomorium ph... [more]
gi|172051152|gb|ACB70351.1|1.023e-2356.25BolA-related protein [Ornithodoros coriaceus][more]
gi|1069821833|ref|XP_018333800.1|1.451e-2355.56PREDICTED: bolA-like protein 2 isoform X2 [Agrilus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna82rna82Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications