EWM30589.1, cds82 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|585113256|gb|EWM30589.1| (BolA protein [Nannochloropsis gaditana]) HSP 1 Score: 261.922 bits (668), Expect = 1.008e-88 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MGETPVFLTRGSPQGRRNPKSPDIARGKTQREEEFDMSATPHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKKC 126
MGETPVFLTRGSPQGRRNPKSPDIARGKTQREEEFDMSATPHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKKC
Sbjct: 1 MGETPVFLTRGSPQGRRNPKSPDIARGKTQREEEFDMSATPHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKKC 126
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|551656841|ref|XP_005831193.1| (bola-like protein [Guillardia theta CCMP2712] >gi|428175322|gb|EKX44213.1| bola-like protein [Guillardia theta CCMP2712]) HSP 1 Score: 105.916 bits (263), Expect = 1.513e-27 Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 0
Query: 44 ITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQ 119
ITP I++KLT+AL A V+A+D+SDGCG KF IL VSP F+G PL++RHRAV+AAL KE IHA+TLKCLTP Q
Sbjct: 6 ITPGLIENKLTQALDATLVKAEDLSDGCGMKFSILIVSPRFDGMPLVERHRAVHAALEKETPDIHALTLKCLTPQQ 81
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|970884887|ref|XP_015127104.1| (PREDICTED: bolA-like protein 2 [Diachasma alloeum]) HSP 1 Score: 98.9821 bits (245), Expect = 9.934e-25 Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0
Query: 45 TPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQW 120
T I+SKL + L+A VE +D SDGCGAKF +L VS FEG+PLLQRHR VNAAL +EL+ IHA + K LTP QW
Sbjct: 4 TEEYIRSKLIKELEASHVEVEDQSDGCGAKFAVLIVSDKFEGKPLLQRHRLVNAALEEELKDIHAFSQKTLTPEQW 79
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|919089373|ref|XP_013381701.1| (PREDICTED: bolA-like protein 2 [Lingula anatina]) HSP 1 Score: 98.5969 bits (244), Expect = 1.328e-24 Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0
Query: 41 PHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKK 125
PH T +I+ KL +AL+A ++E +D+SDGCGAKF+ + VS FEG+PLLQRHR VN+ L +E++ IHA + K LTP QW++ ++
Sbjct: 2 PH--TADEIKDKLQKALEASYLEVEDLSDGCGAKFQAIIVSKKFEGKPLLQRHRLVNSVLEEEMKSIHAFSQKTLTPEQWEKQQQ 84
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|919089423|ref|XP_013381728.1| (PREDICTED: bolA-like protein 2 [Lingula anatina]) HSP 1 Score: 98.5969 bits (244), Expect = 1.449e-24 Identity = 44/85 (51.76%), Postives = 64/85 (75.29%), Query Frame = 0
Query: 41 PHIITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKK 125
PH T +I+ KL +AL+A ++E +D+SDGCGAKF+ + VS FEG+PLLQRHR VN+ L +E++ IHA + K LTP QW++ ++
Sbjct: 2 PH--TADEIKEKLQKALEASYLEVEDLSDGCGAKFQAIIVSKKFEGKPLLQRHRLVNSVLEEEMKSIHAFSQKTLTPEQWEKQQQ 84
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|1173948044|gb|OQR96202.1| (hypothetical protein ACHHYP_16540 [Achlya hypogyna]) HSP 1 Score: 98.2117 bits (243), Expect = 2.177e-24 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 0
Query: 43 IITPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETK 124
++TPA+I KL ALQ +V+ +D SDGCG KF I+ VSP FEG LLQR RAVN AL +E+ IHA+ +K TP Q+++ K
Sbjct: 1 MVTPAEISQKLESALQVTYVQVEDNSDGCGTKFSIIVVSPLFEGMGLLQRQRAVNDALKEEMSSIHALQMKTWTPAQFEQKK 82
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|443709447|gb|ELU04119.1| (hypothetical protein CAPTEDRAFT_17942 [Capitella teleta]) HSP 1 Score: 97.4413 bits (241), Expect = 3.877e-24 Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 0
Query: 45 TPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKK 125
TPA+++ KL L A V+ +D+SDGCGAKF LTVS FEG+ LLQRHR VN LA+EL+ IHA + K LTP QW+ K+
Sbjct: 4 TPAELEEKLRTGLDATHVKIEDLSDGCGAKFSCLTVSSQFEGKALLQRHRLVNGILAEELKTIHAFSQKTLTPQQWESLKQ 84
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|826466512|ref|XP_012535259.1| (PREDICTED: protein BOLA2 isoform X2 [Monomorium pharaonis]) HSP 1 Score: 96.6709 bits (239), Expect = 8.266e-24 Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 0
Query: 48 QIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETK 124
QI+ K+TE L+A+ VE D SDGCGAKF ++ VS F+G+PLL RHR V L +EL+ IHAI+L LTP QW++TK
Sbjct: 7 QIKDKVTEGLKALHVEVVDQSDGCGAKFSVVVVSDLFQGKPLLSRHRLVYGILEEELKTIHAISLTTLTPEQWEKTK 83
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|172051152|gb|ACB70351.1| (BolA-related protein [Ornithodoros coriaceus]) HSP 1 Score: 96.2857 bits (238), Expect = 1.023e-23 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0
Query: 45 TPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETK 124
T ++ KL + L V VE +D+SDGCGAKF + VSP FEG+PLL+RHR VN L+KELE IHA + K LTP QW K
Sbjct: 5 TKEYLEEKLRKELDTVHVELEDISDGCGAKFNAVIVSPKFEGKPLLERHRMVNTVLSKELEAIHAFSQKTLTPEQWQAKK 84
BLAST of EWM30589.1 vs. NCBI_GenBank
Match: gi|1069821833|ref|XP_018333800.1| (PREDICTED: bolA-like protein 2 isoform X2 [Agrilus planipennis]) HSP 1 Score: 95.9005 bits (237), Expect = 1.451e-23 Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 0
Query: 45 TPAQIQSKLTEALQAVFVEAKDMSDGCGAKFEILTVSPTFEGRPLLQRHRAVNAALAKELEHIHAITLKCLTPTQWDETKK 125
T I+ KL + LQA +VE D SDGCG KF VS FEG+PLLQRHR VN+ L +EL+ IHA + K TP QW+E KK
Sbjct: 4 TEKYIKDKLIKELQATYVEVIDESDGCGGKFSCTIVSDKFEGKPLLQRHRLVNSVLQEELKSIHAFSQKTYTPEQWEEEKK 84 The following BLAST results are available for this feature:
BLAST of EWM30589.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|