EWM22461.1, cds8197 (CDS) Nannochloropsis gaditana

Overview
NameEWM22461.1
Unique Namecds8197
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:120871..121746 +
Alignment locationKK037248.1:121813..122156 +
Alignment locationKK037248.1:122303..122585 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22461.1
Productcalcium binding protein 39
Orig transcript idgnl|cribi|Naga_100011g34.3461.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:120871..121746 +
KK037248.1supercontigKK037248.1:121813..122156 +
KK037248.1supercontigKK037248.1:122303..122585 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR013878Mo25
IPR011989ARM-like
Homology
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|585102967|gb|EWM22461.1| (calcium binding protein 39 [Nannochloropsis gaditana])

HSP 1 Score: 1031.94 bits (2667), Expect = 0.000e+0
Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0
Query:    1 MPTGGSSFLSSLTKRKKSPEQLVKLAVACLHELPAVEDASWTCPGVDGTKATVPAMDGLNRGEPGPSKQQKQDELTSSRHSISSSAPSNPDASRTSSAGSDAGASRRSSFFLSAFGKKEAHSHDSGSAPPPHSSAGSSRDGSAADASTSGKVRGISIRPTGLSVSKFFSDSSRKPPILSPQESNWSQGSVGQSGIEGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT 500
            MPTGGSSFLSSLTKRKKSPEQLVKLAVACLHELPAVEDASWTCPGVDGTKATVPAMDGLNRGEPGPSKQQKQDELTSSRHSISSSAPSNPDASRTSSAGSDAGASRRSSFFLSAFGKKEAHSHDSGSAPPPHSSAGSSRDGSAADASTSGKVRGISIRPTGLSVSKFFSDSSRKPPILSPQESNWSQGSVGQSGIEGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT
Sbjct:    1 MPTGGSSFLSSLTKRKKSPEQLVKLAVACLHELPAVEDASWTCPGVDGTKATVPAMDGLNRGEPGPSKQQKQDELTSSRHSISSSAPSNPDASRTSSAGSDAGASRRSSFFLSAFGKKEAHSHDSGSAPPPHSSAGSSRDGSAADASTSGKVRGISIRPTGLSVSKFFSDSSRKPPILSPQESNWSQGSVGQSGIEGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT 500          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|585102966|gb|EWM22460.1| (calcium binding protein 39 [Nannochloropsis gaditana])

HSP 1 Score: 921.383 bits (2380), Expect = 0.000e+0
Identity = 464/500 (92.80%), Postives = 464/500 (92.80%), Query Frame = 0
Query:    1 MPTGGSSFLSSLTKRKKSPEQLVKLAVACLHELPAVEDASWTCPGVDGTKATVPAMDGLNRGEPGPSKQQKQDELTSSRHSISSSAPSNPDASRTSSAGSDAGASRRSSFFLSAFGKKEAHSHDSGSAPPPHSSAGSSRDGSAADASTSGKVRGISIRPTGLSVSKFFSDSSRKPPILSPQESNWSQGSVGQSGIEGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT 500
            MPTGGSSFLSSLTKRKKSPEQLVKLAVACLHELPAVEDASWTCPGVDGTKATVPAMDGLNRGEPGPSKQQKQDELTSSRHSISSSAPSNPDASRTSSAGSDAGASRRSSFFLSAFGKKEAHSHDSGSAPPPHSSAGSSRDGSAADASTSGK                                    GSVGQSGIEGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT
Sbjct:    1 MPTGGSSFLSSLTKRKKSPEQLVKLAVACLHELPAVEDASWTCPGVDGTKATVPAMDGLNRGEPGPSKQQKQDELTSSRHSISSSAPSNPDASRTSSAGSDAGASRRSSFFLSAFGKKEAHSHDSGSAPPPHSSAGSSRDGSAADASTSGK------------------------------------GSVGQSGIEGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT 464          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|953499072|emb|CEG39384.1| (Conserved protein Mo25 [Plasmopara halstedii])

HSP 1 Score: 384.415 bits (986), Expect = 1.187e-126
Identity = 184/300 (61.33%), Postives = 231/300 (77.00%), Query Frame = 0
Query:  201 MERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT 500
            +E + KRLS+MK++LYGDGE+E   +KCV LAE +I  GL+P L+ R   LPFEARK  AQ++NN+ R + AGF   Y+ +H   IL  L++GY +PEVALNCG+MLRE  RHE +A +IL+S  +W FFD +VHLPNF+V SD+FAT +DL T+HKT+AA FL  +++ VF KY  LL S+NYVTRR SLK+LGEILLDRSNF++MM+YI  KENLKM+MNLLRD SA+IQFEAFHVFKVFVANPKKP AI  ILV NR+KL+ YL +F   K+D QF EEK+LL+ TL  L   EAA+
Sbjct:  104 VEVITKRLSEMKVLLYGDGEQEAKLEKCVQLAELLIASGLIPKLISRLDKLPFEARKQFAQVYNNLMRRDLAGFVS-YV-EHKPEILSALVAGYENPEVALNCGTMLRELIRHEVLAGKILYSADLWRFFDVYVHLPNFEVGSDAFATFKDLFTRHKTLAATFLTSKFDVVFTKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIMMKYIGEKENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPEAISVILVNNREKLIAYLKNFQNSKEDPQFIEEKALLIRTLEGLTIGEAAS 401          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|301104400|ref|XP_002901285.1| (calcium-binding protein, putative [Phytophthora infestans T30-4] >gi|262101219|gb|EEY59271.1| calcium-binding protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 381.333 bits (978), Expect = 1.442e-124
Identity = 184/305 (60.33%), Postives = 231/305 (75.74%), Query Frame = 0
Query:  196 EGDSVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT 500
            +G SV E + KRLS++KL+LYGDGE+E   +KC  LAE +I  GL+P L+ R   LPFEARK  AQ++NN+ R + +GF   Y+ +    IL  L++GY + EVALNCG+MLRE+ RHE +A +IL+SP +W FFD +VHLPNF+V SD+FAT +DL T+HKT+AA FL   +E VF KY  LL S+NYVTRR SLK+LGEILLDRSNF++MM+YI  KENLKM+MNLLRD SA+IQFEAFHVFKVFVANPKKP  I  ILV NR+KL+ YL +F   K+D QF EEK+LL+ TL  L   EAA+
Sbjct:   33 DGTSV-EEITKRLSEIKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLITRLDKLPFEARKQFAQVYNNLMRRDLSGFVS-YV-ERKPEILSALVAGYENSEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDEYVHLPNFEVGSDAFATFKDLFTRHKTLAATFLTSNFEVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIMMKYIGEKENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPEVISLILVNNREKLIAYLKNFQNSKEDPQFTEEKALLIRTLEGLKVGEAAS 334          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|567997145|gb|ETL47234.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570958810|gb|ETP23789.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 376.326 bits (965), Expect = 1.879e-124
Identity = 181/302 (59.93%), Postives = 227/302 (75.17%), Query Frame = 0
Query:  199 SVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT 500
            + +E + KRLS+MKL+LYGDGE+E   +KC  LAE +I  GL+P L+     LPFEARK  AQ++NN+ R + AGF   Y+ D    IL  L++GY + EVALNCG+MLRE+ RHE +A +IL+SP +W FFD +VHLPNF+V SD+FAT +DL T+HK +AA F    ++ VF KY  LL S+NYVTRR SLK+LGEILLDRSNF++MM+YI  KENLKM+MNLLRD SA+IQFEAFHVFKVFVANPKKP AI  ILV NR+KL+ YL +F   K+D QF EEK+LL+ TL  L   EAA+
Sbjct:   35 TAVEEITKRLSEMKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLIMGLDKLPFEARKQFAQVYNNLMRRDLAGFVS-YV-DRKPEILSALVAGYENAEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDVYVHLPNFEVGSDAFATFKDLFTRHKNLAATFFTSNFDVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIMMKYIGEKENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPEAISLILVNNREKLIAYLKNFQNSKEDPQFIEEKALLIRTLEGLKVGEAAS 334          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|675182901|ref|XP_008900335.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566031075|gb|ETI53986.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567968717|gb|ETK93840.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568026348|gb|ETM00339.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568056832|gb|ETM53534.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568099336|gb|ETN14050.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570334721|gb|ETO82669.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570994723|gb|ETP51785.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 375.555 bits (963), Expect = 3.031e-124
Identity = 181/302 (59.93%), Postives = 227/302 (75.17%), Query Frame = 0
Query:  199 SVMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEEAAT 500
            + +E + KRLS+MKL+LYGDGE+E   +KC  LAE +I  GL+P L+     LPFEARK  AQ++NN+ R + AGF   Y+ D    IL  L++GY + EVALNCG+MLRE+ RHE +A +IL+SP +W FFD +VHLPNF+V SD+FAT +DL T+HK +AA F    ++ VF KY  LL S+NYVTRR SLK+LGEILLDRSNF++MM+YI  KENLKM+MNLLRD SA+IQFEAFHVFKVFVANPKKP AI  ILV NR+KL+ YL +F   K+D QF EEK+LL+ TL  L   EAA+
Sbjct:   35 TAVEEITKRLSEMKLLLYGDGEQEAKPEKCAQLAELLIASGLVPKLIMGLDKLPFEARKQFAQVYNNLMRRDLAGFVS-YV-DRKPEILSALVAGYENAEVALNCGTMLRESIRHEILAGKILYSPDLWKFFDVYVHLPNFEVGSDAFATFKDLFTRHKNLAATFFTSNFDVVFAKYNCLLMSENYVTRRQSLKLLGEILLDRSNFDIMMKYIGEKENLKMMMNLLRDTSANIQFEAFHVFKVFVANPKKPEAISLILVNNREKLIAYLKNFQNSKEDPQFIEEKALLIRTLEGLKVGEAAS 334          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|1173959480|gb|OQS05710.1| (calcium-binding protein [Thraustotheca clavata])

HSP 1 Score: 369.777 bits (948), Expect = 9.968e-122
Identity = 171/295 (57.97%), Postives = 228/295 (77.29%), Query Frame = 0
Query:  200 VMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLD 494
            V++ + KRL+Q+KL+LYGDGE E +  KC  ++  +I + ++P L+     LPFEARK  AQI+NN+ R +  GF + Y+ D    I+  L+ GY + E+ALNCG+MLRE+ RHE +AR+IL+SP +W FFDT+VHLPNFDV SD+FAT +DLLT+HK + + F +  + QVF+KY  LL+S+NYVTRR SLK+LGEILLDRSNF++MM+YI  +ENLKM+MNLLRD S +IQFEAFHVFKVFVANPKKP  I +IL+TN+DKL+ YL  F  +K+DEQF EEK+LL+ TL+ L+
Sbjct:   37 VVDIVTKRLNQIKLMLYGDGEHETNPQKCAQMSSLLIADNMIPRLVLNLEKLPFEARKHVAQIYNNLMRRDVCGFVE-YV-DRQPQIMSALVHGYENAEIALNCGTMLRESIRHEILARQILYSPDLWKFFDTYVHLPNFDVGSDAFATFKDLLTRHKPLVSAFFDSHFNQVFEKYNKLLSSENYVTRRQSLKLLGEILLDRSNFDIMMQYICKRENLKMMMNLLRDPSVNIQFEAFHVFKVFVANPKKPNEITQILLTNKDKLIAYLEKFQNEKEDEQFVEEKNLLIRTLSTLE 329          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|669146638|ref|XP_008608881.1| (calcium binding protein 39 [Saprolegnia diclina VS20] >gi|530739706|gb|EQC37948.1| calcium binding protein 39 [Saprolegnia diclina VS20])

HSP 1 Score: 368.622 bits (945), Expect = 1.653e-121
Identity = 171/298 (57.38%), Postives = 228/298 (76.51%), Query Frame = 0
Query:  200 VMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEE 497
            V++ + KRL+Q+KL+LYGDGE+E +  KC  ++  +I + ++P L+     LPFEARK  AQI+NN+ R +  GF   Y+ +    I+  L+ GY H E+ALNCG+MLRE+ RHE +A++IL SP +W FFD +VHLPNFDV SD+FAT +DLLT+HK + ++F +  ++ VF+KY  LL+S+NYVTRR SLK+LGEILLDRSNF+VMMRYI  +ENLKM+MNLLRD S +IQFEAFHVFKVFVANPKKP  I +IL+TN+DKL+ YL  F  +K+DEQF EEKSLL+ TL+ L+  +
Sbjct:   37 VVDIVTKRLNQIKLLLYGDGEQESNPQKCAQMSMLLIADNMIPRLVLNLEKLPFEARKHVAQIYNNLMRRDLGGFV-AYV-ERQPQIISALVRGYEHSEIALNCGTMLRESIRHEVLAKQILHSPDLWKFFDVYVHLPNFDVGSDAFATFKDLLTRHKPLVSQFFDSHFDMVFEKYNKLLSSENYVTRRQSLKLLGEILLDRSNFDVMMRYICKRENLKMMMNLLRDTSVNIQFEAFHVFKVFVANPKKPNEITQILLTNKDKLIAYLEKFQNEKEDEQFVEEKSLLIRTLSTLELRQ 332          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|813164456|ref|XP_012203288.1| (hypothetical protein SPRG_08654 [Saprolegnia parasitica CBS 223.65] >gi|641531952|gb|KDO26001.1| hypothetical protein SPRG_08654 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 367.851 bits (943), Expect = 3.138e-121
Identity = 170/298 (57.05%), Postives = 228/298 (76.51%), Query Frame = 0
Query:  200 VMERLAKRLSQMKLVLYGDGEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLDYEE 497
            V++ + KRL+Q+KL+LYGDGE+E +  KC  ++  +I + ++P L+     LPFEARK  AQI+NN+ R +  GF   Y+ +    ++  L+ GY H E+ALNCG+MLRE+ RHE +A++IL SP +W FFD +VHLPNFDV SD+FAT +DLLT+HK + ++F E  ++ VF+KY  LL+S+NYVTRR SLK+LGEILLDRSNF+VMMRYI  +ENLKM+MNLLRD S +IQFEAFHVFKVFVANPKKP  I +IL+TN++KL+ YL  F  +K+DEQF EEKSLL+ TL+ L+  +
Sbjct:   37 VVDIVTKRLNQIKLLLYGDGEQESNPQKCAQMSMLLIADNMIPRLVLNLEKLPFEARKHVAQIYNNLMRRDLGGFV-AYV-ERQPQMISALVRGYEHSEIALNCGTMLRESIRHEALAKQILHSPDLWKFFDVYVHLPNFDVGSDAFATFKDLLTRHKPLVSQFFESHFDMVFEKYNKLLSSENYVTRRQSLKLLGEILLDRSNFDVMMRYICKRENLKMMMNLLRDTSVNIQFEAFHVFKVFVANPKKPNEITQILLTNKEKLIAYLEKFQNEKEDEQFVEEKSLLIRTLSTLELRQ 332          
BLAST of EWM22461.1 vs. NCBI_GenBank
Match: gi|1173944793|gb|OQR93486.1| (calcium-binding protein [Achlya hypogyna])

HSP 1 Score: 365.925 bits (938), Expect = 1.843e-120
Identity = 172/296 (58.11%), Postives = 228/296 (77.03%), Query Frame = 0
Query:  200 VMERLAKRLSQMKLVLYGD-GEKEVDKDKCVDLAENIIKEGLMPLLLDRFTNLPFEARKDAAQIFNNIARHNHAGFADPYIADHHFSILEQLISGYGHPEVALNCGSMLREAARHEKVARRILFSPHVWPFFDTFVHLPNFDVASDSFATLRDLLTKHKTVAAEFLEEEYEQVFDKYKSLLASDNYVTRRMSLKMLGEILLDRSNFNVMMRYISSKENLKMIMNLLRDKSASIQFEAFHVFKVFVANPKKPPAIVKILVTNRDKLVTYLTHFHTDKDDEQFREEKSLLVNTLANLD 494
            V++ + KRL+Q+KL+LYGD GE+E +  KC  ++  +I +G++P L+     LPFEARK  AQI+NN+ R +  GF   Y+ +    I+  L+ GY   E+ALNCG+MLRE+ RHE +AR+IL SP +W FFD +VHLPNFDV SD+FAT +DLLT+HK + ++F +  +++VF+KY  LL+S+NYVTRR SLK+LGEILLDR+NF++MMRYI  +ENLKM+MNLLRD S +IQFEAFHVFKVFVANPKKP  I +IL+TN+DKL+ YL  F  DKDDEQF EEKSLL+ TL+ L+
Sbjct:   37 VVDIVTKRLNQIKLLLYGDVGEQESNPQKCAQMSMLLIADGMVPRLVLNLEKLPFEARKHVAQIYNNLMRRDLGGFV-AYV-ERQPRIMSALVMGYEQSEIALNCGTMLRESIRHEVLARQILNSPDLWKFFDVYVHLPNFDVGSDAFATFKDLLTRHKPLVSQFFDSHFDEVFEKYNKLLSSENYVTRRQSLKLLGEILLDRANFDIMMRYICKRENLKMMMNLLRDPSVNIQFEAFHVFKVFVANPKKPNEITQILLTNKDKLIAYLDKFQNDKDDEQFVEEKSLLIRTLSTLE 330          
The following BLAST results are available for this feature:
BLAST of EWM22461.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102967|gb|EWM22461.1|0.000e+0100.00calcium binding protein 39 [Nannochloropsis gadita... [more]
gi|585102966|gb|EWM22460.1|0.000e+092.80calcium binding protein 39 [Nannochloropsis gadita... [more]
gi|953499072|emb|CEG39384.1|1.187e-12661.33Conserved protein Mo25 [Plasmopara halstedii][more]
gi|301104400|ref|XP_002901285.1|1.442e-12460.33calcium-binding protein, putative [Phytophthora in... [more]
gi|567997145|gb|ETL47234.1|1.879e-12459.93hypothetical protein, variant 1 [Phytophthora para... [more]
gi|675182901|ref|XP_008900335.1|3.031e-12459.93hypothetical protein, variant 1 [Phytophthora para... [more]
gi|1173959480|gb|OQS05710.1|9.968e-12257.97calcium-binding protein [Thraustotheca clavata][more]
gi|669146638|ref|XP_008608881.1|1.653e-12157.38calcium binding protein 39 [Saprolegnia diclina VS... [more]
gi|813164456|ref|XP_012203288.1|3.138e-12157.05hypothetical protein SPRG_08654 [Saprolegnia paras... [more]
gi|1173944793|gb|OQR93486.1|1.843e-12058.11calcium-binding protein [Achlya hypogyna][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8221rna8221Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications