EWM22502.1, cds8183 (CDS) Nannochloropsis gaditana

Overview
NameEWM22502.1
Unique Namecds8183
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:89274..89351 -
Alignment locationKK037248.1:88983..89111 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22502.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100011g20.3502.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:89274..89351 -
KK037248.1supercontigKK037248.1:88983..89111 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22502.1 vs. NCBI_GenBank
Match: gi|585103008|gb|EWM22502.1| (hypothetical protein Naga_100011g20 [Nannochloropsis gaditana])

HSP 1 Score: 140.584 bits (353), Expect = 2.200e-42
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 
Query:    1 MVTCSSAIVSARTIIVPKVMQHTLSGRASEELRGDHILMLGFHAVSQEMLCWMKIECNSSIAPFVLPI 68
            MVTCSSAIVSARTIIVPKVMQHTLSGRASEELRGDHILMLGFHAVSQEMLCWMKIECNSSIAPFVLPI
Sbjct:    1 MVTCSSAIVSARTIIVPKVMQHTLSGRASEELRGDHILMLGFHAVSQEMLCWMKIECNSSIAPFVLPI 68
The following BLAST results are available for this feature:
BLAST of EWM22502.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103008|gb|EWM22502.1|2.200e-42100.00hypothetical protein Naga_100011g20 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8207rna8207Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications