EWM22467.1, cds8176 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|585102973|gb|EWM22467.1| (rna binding protein [Nannochloropsis gaditana]) HSP 1 Score: 747.273 bits (1928), Expect = 0.000e+0 Identity = 361/361 (100.00%), Postives = 361/361 (100.00%), Query Frame = 0
Query: 1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYRPNKTVVEGDAATSGFPSAYAVAPLGGERGGGAERGMRSRRMIQGPSDGMGGNLAMNGGRGGMLGYDLYQQQHVPLQHMHAHQHLHQPPLQHLMMQPFPGPVRN 361
MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYRPNKTVVEGDAATSGFPSAYAVAPLGGERGGGAERGMRSRRMIQGPSDGMGGNLAMNGGRGGMLGYDLYQQQHVPLQHMHAHQHLHQPPLQHLMMQPFPGPVRN
Sbjct: 1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYRPNKTVVEGDAATSGFPSAYAVAPLGGERGGGAERGMRSRRMIQGPSDGMGGNLAMNGGRGGMLGYDLYQQQHVPLQHMHAHQHLHQPPLQHLMMQPFPGPVRN 361
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|553179889|ref|XP_005852780.1| (hypothetical protein NGA_0682100 [Nannochloropsis gaditana CCMP526] >gi|422295750|gb|EKU23049.1| hypothetical protein NGA_0682100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 409.453 bits (1051), Expect = 1.656e-141 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
Query: 1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLAC 199
MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLAC
Sbjct: 1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLAC 199 HSP 2 Score: 60.8474 bits (146), Expect = 3.714e-7 Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 0
Query: 180 SDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYRPNKTVVEG 266
S TV GN+ W T + L M AGRV+ ++Q H+DT RSKGWA++ + T E+ + A+ L ++ R L VR R EG
Sbjct: 2 SKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEG 88
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|585101195|gb|EWM21128.1| (poly binding cytoplasmic isoform cra_c [Nannochloropsis gaditana]) HSP 1 Score: 189.119 bits (479), Expect = 5.912e-55 Identity = 92/216 (42.59%), Postives = 139/216 (64.35%), Query Frame = 0
Query: 47 ALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEA-----SDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFY 257
+L+ + E A++A+E L G+E++ R L+VREDR+ ++ EG VVFVGNLPW +T+ L+ +F E++P DVH+KTNM+GRSRGF L++F +E A AI ++G ++ R I VR DR E +D VT N+ W T + L +++AG VV +IQRHADT RSKGWAI + + +E NA+ +L++TV+ R ++++FY
Sbjct: 6 SLIHYSAPEVAAKAIEALNGQELDNRKLHVREDRSYLDSAEGVVVFVGNLPWSVTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFY 221 HSP 2 Score: 73.1738 bits (178), Expect = 2.654e-11 Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 0
Query: 5 VFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFV-------------VFVGNLPWDMTASGLRTVFSEF-SPYDVHIKTNM-SGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRL 162
VFVGNL W T+++L + + L V V+ + GRS+G+ALV F AE A A+ L G ++EGRP+ VR DR + E EG V + NL W L ++ S+ + V I+ + +GRS+G+ + F S +EA AI ++ V++R I ++
Sbjct: 50 VFVGNLPWSVTSEALQELFKEYNP-LDVHVKTNM-AGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKF 220 HSP 3 Score: 67.3958 bits (163), Expect = 2.174e-9 Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVR 77
++ V + NL+W T L +++ AG V+GVE+Q H+DTGRSKGWA+ TF + ++A A+ L V RP+ ++
Sbjct: 143 LTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMK 219
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|299471941|emb|CBN79621.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 182.57 bits (462), Expect = 9.781e-51 Identity = 85/161 (52.80%), Postives = 110/161 (68.32%), Query Frame = 0
Query: 4 TVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 164
TVFVGNLSWGTT++ L M + G V+ EVQ+H+D+GRSKGW LVT+ A A+E L ++ GRP+++R DR E+E GF VFVGNLPW T L+ +F+ + PYD H+KTNM+GRSRGFG+LRF + E QRAI +M + R I VR DR
Sbjct: 53 TVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDR 213 HSP 2 Score: 85.5001 bits (210), Expect = 7.125e-15 Identity = 58/169 (34.32%), Postives = 83/169 (49.11%), Query Frame = 0
Query: 90 VVFVGNLPWDMTASGLRTV---FSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVR 255
VFVGNL W T+ LRT E +V + SGRS+G+GL+ + A+ AIEQ++ + R I +RLDR +E G P V GN+PW T DE L A C ++ + RS+G+ I+R+ T E G A+ + +D R + VR
Sbjct: 53 TVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHAD-SGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFP--------VFVGNLPWSTTDEDLQQIFAPY-EPYDCHVKTNM-AGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVR 210 HSP 3 Score: 64.3142 bits (155), Expect = 7.826e-8 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 0
Query: 4 TVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDR 80
TVFVGNL+WGTT D L A +TAG V+ VQ + +GRSKGW LV + + + A+ L + R L VR DR
Sbjct: 286 TVFVGNLAWGTTDDDLLATFQTAGAVVSAHVQI-APSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVRLDR 361
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|514691886|ref|XP_004993516.1| (hypothetical protein PTSG_05647 [Salpingoeca rosetta] >gi|326428383|gb|EGD73953.1| hypothetical protein PTSG_05647 [Salpingoeca rosetta]) HSP 1 Score: 123.25 bits (308), Expect = 2.364e-28 Identity = 86/280 (30.71%), Postives = 129/280 (46.07%), Query Frame = 0
Query: 4 TVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDR------------------------TEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYD-VHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYR 258
+V+VGNLSW TT L M G V +V GRSKG +V F E A+RA+ + GRE++GR + VREDR E G V+VG LP+ MT L+ + + P + V + + +G S+G GL+RF ++E+AQ AI + + R +LVR+D +V GN+PW L M AG V+ ++ H + S+GW I+R+V+ + A+ + R++ VR R
Sbjct: 59 SVYVGNLSWSTTWPRLKEFMSEIGHVAFADV-LRDMNGRSKGCGIVVFGDVETANRAIAEMSGRELDGRQIMVREDREAHRFPRRSARPPAPMHRPSTNYTATFSGEMGSTVYVGGLPYSMTWQHLKDLMRKAGPVEHVEVMYDGNGMSKGCGLVRFATAEDAQNAIRMFNEQPLDGRNLLVRVD--------AEADKYRRGVSVHVGNLPWEVTWRELKDLMRPAGEVIHAEVM-HDNNGLSRGWGIVRFVSADGANAAIEQFNEFEWLGRSITVRLDR 328 HSP 2 Score: 98.5969 bits (244), Expect = 1.943e-19 Identity = 65/169 (38.46%), Postives = 88/169 (52.07%), Query Frame = 0
Query: 1 MSKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSP-YDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLE 168
M TV+VG L + T L +M AG V VEV + G SKG LV F TAEDA A+ + + ++GR L VR D + G V VGNLPW++T L+ + + + +G SRG+G++RF S++ A AIEQ + R I VRLDR E
Sbjct: 165 MGSTVYVGGLPYSMTWQHLKDLMRKAGPVEHVEVM-YDGNGMSKGCGLVRFATAEDAQNAIRMFNEQPLDGRNLLVRVDAEADKYRRGVSVHVGNLPWEVTWRELKDLMRPAGEVIHAEVMHDNNGLSRGWGIVRFVSADGANAAIEQFNEFEWLGRSITVRLDRREAE 332 HSP 3 Score: 80.8777 bits (198), Expect = 2.218e-13 Identity = 60/189 (31.75%), Postives = 89/189 (47.09%), Query Frame = 0
Query: 84 EKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYD-VHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR---------AHLEMMGHSPATM-------EASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVR 255
+ + G V+VGNL W T L+ SE + +M+GRS+G G++ F E A RAI +M G + R+I+VR DR A H P+T E TV G +P+ + L M +AG V ++ + + SKG ++R+ T E+ NA+R + LD R L VR
Sbjct: 53 QNQPGTSVYVGNLSWSTTWPRLKEFMSEIGHVAFADVLRDMNGRSKGCGIVVFGDVETANRAIAEMSGRELDGRQIMVREDREAHRFPRRSARPPAPMHRPSTNYTATFSGEMGSTVYVGGLPYSMTWQHLKDLMRKAGPVEHVEVMYDGNGM-SKGCGLVRFATAEDAQNAIRMFNEQPLDGRNLLVR 240
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|255089439|ref|XP_002506641.1| (predicted protein [Micromonas commoda] >gi|226521914|gb|ACO67899.1| predicted protein [Micromonas commoda]) HSP 1 Score: 120.553 bits (301), Expect = 4.513e-28 Identity = 80/276 (28.99%), Postives = 128/276 (46.38%), Query Frame = 0
Query: 5 VFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRT-----------------EIEKEEGFVVFVGNLPWDMTASGLRTVFSEF-SPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRA--HLEMMGHSPATMEASD--TVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYR 258
++VGN+ W TT D L I G + V++ GRS+G+ +V + +A A++ L G + R + VRED+ + +G +VGNL W+ L S+ + + GRS+G+GL+ F + + A AI +H +Q R I+VRL+RA + G + EAS + N+PW T E L Q G V+ + HADT RSKGW + + T E+ A++ + L+ R + ++ R
Sbjct: 9 LYVGNIPWSTTVDELRGIFSGCGTITLVDIPTGRQ-GRSRGYGIVEYSNVNEAQVAIQTLDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTIGDTPAADGCRCYVGNLAWETNEESLIAHCSQVGTVVQAEVAKQPGGRSKGWGLVDFETPDAANSAINTLHNSDLQGRSIIVRLERAGGANKSGGPNAGRPEASSGLQIVVRNLPWSTTSEDLRQVFQQVGTVIKAEAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKLDR 283
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|303284108|ref|XP_003061345.1| (hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla CCMP1545] >gi|226457696|gb|EEH54995.1| hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla CCMP1545]) HSP 1 Score: 119.013 bits (297), Expect = 2.362e-27 Identity = 87/291 (29.90%), Postives = 128/291 (43.99%), Query Frame = 0
Query: 5 VFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRT------------------------EIEKEEGFVVFVGNLPWDMTASGLRTVFSEF-------SPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCG------NIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYR 258
++VGNL W T D L AI + G + V++ GRS+G+ +V + +A +A A+ L G + R L VRED E EG ++GNL W+ TA L F ++ S + + GRS+G+GL+ F S A+ AI +H +Q R I+VRL+RA G + G N+PW T E L Q G VV HADT RSKGW + + T E+ A++ + L+ R + ++ R
Sbjct: 10 LYVGNLPWSTDVDELRAIFSSCGAITHVDI-PKGRQGRSRGYGIVEYSSAAEAQAAIAQLEGHTLGDRNLTVREDNAPTKTANSGGGSKSGGGRGSGNVMGETPAAEGCRCYIGNLAWETTAESLVGAFEDYPHFSSVGSVVNAEVAKQPGGRSKGWGLVDFESPAAAESAIATLHNSDLQGRSIIVRLERAGGATKGPGGGANAGRPEASSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVKADAVCHADTGRSKGWGTVLFETREQAQAAIQGFNGVELESRPMQIKLDR 299
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|695463847|ref|XP_009538814.1| (hypothetical protein PHYSODRAFT_348578 [Phytophthora sojae] >gi|348666125|gb|EGZ05953.1| hypothetical protein PHYSODRAFT_348578 [Phytophthora sojae]) HSP 1 Score: 119.783 bits (299), Expect = 3.141e-27 Identity = 85/267 (31.84%), Postives = 132/267 (49.44%), Query Frame = 0
Query: 5 VFVGNLSWGTTADSLTAIMETAGRV-LGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDR-----TEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVH--IKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR-------AHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRF 256
V+VGNLSW L M+ AG V L ++++ GRSKG +VT+ET E A A+ L E+ GR ++VREDR + ++ + GF V+VGNL W++ L+ + VH + +GRS+G GL+ + + EEA +AI +++ ++ R I VR DR + +P + GN+PW T + L G V I + D RS+G+ IIRY + A+ L+ ++ R + VR
Sbjct: 91 VYVGNLSWSIKWQDLKDHMQAAGPVELATVLESN---GRSKGCGIVTYETEEAAQNAIATLNDTELGGRKIFVREDREAQPVSAVKPKRGFRVYVGNLSWNVKWQELKDHMKKAGTV-VHADVLEEPNGRSKGCGLVEYATQEEAAKAIAELNNTELEGRLIFVREDREPEGGSISKFAKRAAAPRGSGEGRQLYVGNLPWETNWQQLKDLFRTVGDVERADIAEYPDG-RSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEVRL 352 HSP 2 Score: 106.686 bits (265), Expect = 1.861e-22 Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 0
Query: 5 VFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDR-------TEIEKE--------EGFVVFVGNLPWDMTASGLRTVFSEFSPYD-VHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 164
V+VGNLSW L M+ AG V+ +V + GRSKG LV + T E+A++A+ L E+EGR ++VREDR ++ K EG ++VGNLPW+ L+ +F + I GRSRGFG++R+ ++ +A +AIE+++G+ ++ R I VRLD+
Sbjct: 180 VYVGNLSWNVKWQELKDHMKKAGTVVHADVLEEPN-GRSKGCGLVEYATQEEAAKAIAELNNTELEGRLIFVREDREPEGGSISKFAKRAAAPRGSGEGRQLYVGNLPWETNWQQLKDLFRTVGDVERADIAEYPDGRSRGFGIIRYTNAADAWQAIERLNGLEIEGRLIEVRLDK 354 HSP 3 Score: 85.8853 bits (211), Expect = 4.395e-15 Identity = 58/176 (32.95%), Postives = 84/176 (47.73%), Query Frame = 0
Query: 88 GFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTL-----RSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYR 258
G V+VGNL W + L+ P ++ +GRS+G G++ + + E AQ AI ++ + RKI VR DR + P + V GN+ W+ + L HM +AG VV HAD L RSKG ++ Y T EE A+ L+ T L+ R + VR R
Sbjct: 88 GCRVYVGNLSWSIKWQDLKDHMQAAGPVELATVLESNGRSKGCGIVTYETEEAAQNAIATLNDTELGGRKIFVREDREAQPVSAVKP---KRGFRVYVGNLSWNVKWQELKDHMKKAGTVV------HADVLEEPNGRSKGCGLVEYATQEEAAKAIAELNNTELEGRLIFVREDR 254
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|145354241|ref|XP_001421399.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144581636|gb|ABO99692.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 117.857 bits (294), Expect = 5.255e-27 Identity = 69/184 (37.50%), Postives = 98/184 (53.26%), Query Frame = 0
Query: 91 VFVGNLPWDMTASGLRTVFSEFSPYD-VHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRA-----------HLEMMGHSPATMEASDTVTC--GNIPWHTGDEVLACHMAQAG-RVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYRP 259
++VGN+PW T LR +F+E V I T GRSRG+GL+ F S EAQ A+ +M G + +R I VR D+A ++G +PA D C GN+ W T +E L H A G VV C++ R + RSKGWA++ + T EE NA+ +H + + R++ VR RP
Sbjct: 11 LYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGRQGRSRGYGLVEFNSEAEAQAAVTRMDGTPLGDRTITVREDKAPTKAAGGAKKASASVLGDAPA---GGDGCRCYFGNLAWETSEETLTSHCASFGVNVVQCEVARQSGG-RSKGWALVDFATPEEAQNAIEQMHNSEIQGRSIIVRVERP 190 HSP 2 Score: 112.464 bits (280), Expect = 5.144e-25 Identity = 83/283 (29.33%), Postives = 130/283 (45.94%), Query Frame = 0
Query: 2 SKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKE------------------EGFVVFVGNLPWDMTASGLRTVFSEF--SPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCG------NIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYR 258
S ++VGN+ W TT + L + G V V++ GRS+G+ LV F + +A A+ + G + R + VRED+ + +G + GNL W+ + L + + F + + GRS+G+ L+ F + EEAQ AIEQMH +Q R I+VR++R G A +E + G N+PW T E L Q G VV+ H DT RSKGW + + T E+ A++ + L+ R + ++ R
Sbjct: 8 SARLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGRQ-GRSRGYGLVEFNSEAEAQAAVTRMDGTPLGDRTITVREDKAPTKAAGGAKKASASVLGDAPAGGDGCRCYFGNLAWETSEETLTSHCASFGVNVVQCEVARQSGGRSKGWALVDFATPEEAQNAIEQMHNSEIQGRSIIVRVERPG---AGQKSARVETRPENSSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVNAVAVCHTDTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKLDR 286
BLAST of EWM22467.1 vs. NCBI_GenBank
Match: gi|1129187643|gb|OLP93515.1| (putative RNA-binding protein [Symbiodinium microadriaticum]) HSP 1 Score: 119.013 bits (297), Expect = 1.819e-26 Identity = 98/303 (32.34%), Postives = 136/303 (44.88%), Query Frame = 0
Query: 5 VFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEE--GFVVFVGNLPWDMTASGLRTVF---SEFSPYDVHIKTNMSG-RSRGFGLLRFRSSEE---------AQRAIEQMHGITVQERKILVRLDR---------------------AHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQI-QRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYRPNKTVVEGDAAT 270
V+V NL W L M++ G V+ ++ DTGRS+G LV F AEDA RA+ L E+ GR + VREDR + E V+VGNL W T L+ F E D+ + N+ G RS+G G++ F + EE A A+EQ+ G + RKI VR DR A + G + E V GN+P+ + L HM Q G V+ +I D RSKG ++ + T AV+ LH ++L R + VR Y + G AT
Sbjct: 32 VYVSNLPWHVAWQELKDHMKSVGEVVYADIFTE-DTGRSRGCGLVAFRRAEDAQRAVLELNDSELSGRQIAVREDRVDQSTGERKDCRVYVGNLAWIATWKDLKDHFRSVGEVKRADILSEGNLEGARSKGAGIVEFSTKEEDLYPSDETRASAAVEQLTGTEILGRKIFVREDRESNRPQTLAWPPGDVWSRAMVAVAQGPGFRKSFAEPFTKVFAGNLPYSVTWQQLKDHMRQVGEVLHVEILMDDNDPRRSKGCGVVEFATFGAARRAVQYLHDSMLQGRLMYVREYHDDLKNAGGATAT 333 The following BLAST results are available for this feature:
BLAST of EWM22467.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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