EWM22523.1, cds8150 (CDS) Nannochloropsis gaditana

Overview
NameEWM22523.1
Unique Namecds8150
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:19768..19929 -
Alignment locationKK037248.1:19453..19582 -
Alignment locationKK037248.1:19104..19288 -
Alignment locationKK037248.1:16791..18650 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22523.1
Producthelicase sen1
Partialtrue
Orig transcript idgnl|cribi|Naga_100590g1.7452.mrna
GbkeyCDS
End range.
End range19929
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:19768..19929 -
KK037248.1supercontigKK037248.1:19453..19582 -
KK037248.1supercontigKK037248.1:19104..19288 -
KK037248.1supercontigKK037248.1:16791..18650 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR026852Sen1-like
IPR027417P-loop_NTPase
Homology
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|585103040|gb|EWM22523.1| (helicase sen1, partial [Nannochloropsis gaditana])

HSP 1 Score: 1558.12 bits (4033), Expect = 0.000e+0
Identity = 778/778 (100.00%), Postives = 778/778 (100.00%), Query Frame = 0
Query:    1 PPSLPPRPWTPPSRSSGRASARRCWASLTSLRSGPSRPLPPIRASRSSKAPPGQARLPHLKACLTPSTFASTNVSIRACWRWRRRRTSTQRGRGASTGRRNLTSWSPRPATWQSTTSSFGSWRTASSTGKGVGTILPLSGWAALGVKRCVRMGRFGSEKVRAVSLDQQVDALLLEPDKSLQNRCLQGRSHLAALTQALVLARHRYRQLVKAMREGGGQGGRVLPYGWDARVEDSGTVIFFAPETGQTSQDFPTLPALGGREGGQGLTGRRLEQLGAYQAYCGEVTRLVEQIENLSLEVGRGEVRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGGGKGGGREGGCGGGKEGDKPPATGPASLSPALPPSRPPARPPSFSPDPGSPTPSHPPSSVPPLPLPPPCLLSSPSDMAIPGTALCDDYSRPPPSSPSFQSTCVHESRLLLPSSLLLAPAFPSPPTRAHAKATSSGES 778
            PPSLPPRPWTPPSRSSGRASARRCWASLTSLRSGPSRPLPPIRASRSSKAPPGQARLPHLKACLTPSTFASTNVSIRACWRWRRRRTSTQRGRGASTGRRNLTSWSPRPATWQSTTSSFGSWRTASSTGKGVGTILPLSGWAALGVKRCVRMGRFGSEKVRAVSLDQQVDALLLEPDKSLQNRCLQGRSHLAALTQALVLARHRYRQLVKAMREGGGQGGRVLPYGWDARVEDSGTVIFFAPETGQTSQDFPTLPALGGREGGQGLTGRRLEQLGAYQAYCGEVTRLVEQIENLSLEVGRGEVRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGGGKGGGREGGCGGGKEGDKPPATGPASLSPALPPSRPPARPPSFSPDPGSPTPSHPPSSVPPLPLPPPCLLSSPSDMAIPGTALCDDYSRPPPSSPSFQSTCVHESRLLLPSSLLLAPAFPSPPTRAHAKATSSGES
Sbjct:    1 PPSLPPRPWTPPSRSSGRASARRCWASLTSLRSGPSRPLPPIRASRSSKAPPGQARLPHLKACLTPSTFASTNVSIRACWRWRRRRTSTQRGRGASTGRRNLTSWSPRPATWQSTTSSFGSWRTASSTGKGVGTILPLSGWAALGVKRCVRMGRFGSEKVRAVSLDQQVDALLLEPDKSLQNRCLQGRSHLAALTQALVLARHRYRQLVKAMREGGGQGGRVLPYGWDARVEDSGTVIFFAPETGQTSQDFPTLPALGGREGGQGLTGRRLEQLGAYQAYCGEVTRLVEQIENLSLEVGRGEVRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGGGKGGGREGGCGGGKEGDKPPATGPASLSPALPPSRPPARPPSFSPDPGSPTPSHPPSSVPPLPLPPPCLLSSPSDMAIPGTALCDDYSRPPPSSPSFQSTCVHESRLLLPSSLLLAPAFPSPPTRAHAKATSSGES 778          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|673038162|ref|XP_008873042.1| (hypothetical protein, variant 2 [Aphanomyces invadans] >gi|574471159|gb|ETV98167.1| hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 356.295 bits (913), Expect = 5.062e-107
Identity = 182/369 (49.32%), Postives = 240/369 (65.04%), Query Frame = 0
Query:  275 GAYQAYCGEVTRL---VEQIENLSLEVGRGEVRLLGMGP-GAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAF-PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGL 638
             AY+ Y     R+   +E+  +L LE+ R  + L  +   G      +  LE++  +SAHIV TTL++AG  ++    R+ ++V+DEAAQA+E ST+IP++ G+  CVLVGDPQQL ATVFS   A + +ERSLFERLE  GHPVH+L TQYR HP ISAFPR +FYG +L+DG+NV  PAYS+ +H+  PAFQP  F +L +         REG   +S  N  E +L VN+Y TLR       +RGKVGVITPY AQ+ EL   FA A G  + ++VE+NTVDG QG+EKD+I+ S VR+  ++G+GFL D+RRMNV LTR + A  V+G    LQ +  W ALLDHAR TG  V VP+P  NL  L
Sbjct:  392 NAYKQYRDMAQRINLCLERFHSLKLELQRHVMVLRSIETHGRVVKETQDTLESSFLESAHIVFTTLSSAGHRALDDSTRYDILVIDEAAQAVELSTIIPMRFGSRQCVLVGDPQQLSATVFSRTSAQSLYERSLFERLESCGHPVHMLRTQYRSHPTISAFPRHFFYGGILQDGQNVCQPAYSKMYHSLAPAFQPLVFFNLSN--------SREGMSSMSRSNPMEVKLAVNLYLTLRNSCPPDAIRGKVGVITPYAAQMDELKRAFAVACGGDFHQDVEINTVDGYQGREKDIIILSTVRSDPRKGVGFLNDIRRMNVALTRAKFACYVLGSEAALQNSKPWAALLDHARVTGCLVHVPNPQENLFTL 752          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|673038158|ref|XP_008873040.1| (hypothetical protein H310_08897 [Aphanomyces invadans] >gi|574471157|gb|ETV98165.1| hypothetical protein H310_08897 [Aphanomyces invadans])

HSP 1 Score: 358.992 bits (920), Expect = 1.473e-104
Identity = 182/369 (49.32%), Postives = 240/369 (65.04%), Query Frame = 0
Query:  275 GAYQAYCGEVTRL---VEQIENLSLEVGRGEVRLLGMGP-GAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAF-PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGL 638
             AY+ Y     R+   +E+  +L LE+ R  + L  +   G      +  LE++  +SAHIV TTL++AG  ++    R+ ++V+DEAAQA+E ST+IP++ G+  CVLVGDPQQL ATVFS   A + +ERSLFERLE  GHPVH+L TQYR HP ISAFPR +FYG +L+DG+NV  PAYS+ +H+  PAFQP  F +L +         REG   +S  N  E +L VN+Y TLR       +RGKVGVITPY AQ+ EL   FA A G  + ++VE+NTVDG QG+EKD+I+ S VR+  ++G+GFL D+RRMNV LTR + A  V+G    LQ +  W ALLDHAR TG  V VP+P  NL  L
Sbjct:  855 NAYKQYRDMAQRINLCLERFHSLKLELQRHVMVLRSIETHGRVVKETQDTLESSFLESAHIVFTTLSSAGHRALDDSTRYDILVIDEAAQAVELSTIIPMRFGSRQCVLVGDPQQLSATVFSRTSAQSLYERSLFERLESCGHPVHMLRTQYRSHPTISAFPRHFFYGGILQDGQNVCQPAYSKMYHSLAPAFQPLVFFNLSN--------SREGMSSMSRSNPMEVKLAVNLYLTLRNSCPPDAIRGKVGVITPYAAQMDELKRAFAVACGGDFHQDVEINTVDGYQGREKDIIILSTVRSDPRKGVGFLNDIRRMNVALTRAKFACYVLGSEAALQNSKPWAALLDHARVTGCLVHVPNPQENLFTL 1215          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|813151428|ref|XP_012201173.1| (hypothetical protein SPRG_20179 [Saprolegnia parasitica CBS 223.65] >gi|641534058|gb|KDO28017.1| hypothetical protein SPRG_20179 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 353.984 bits (907), Expect = 2.715e-103
Identity = 182/369 (49.32%), Postives = 237/369 (64.23%), Query Frame = 0
Query:  277 YQAYCGEVTRLVEQIENLSLEVGRGE-VRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAF-PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGGG 643
            Y+     +   +E+   L LE  R   VR         P   + +LE++  +SAHIV TTL++AG  ++    R+ ++V+DEAAQA+E ST+IP++ G++ CVLVGDPQQL ATVFS   A + +ERSLFERLE  GHPVH+L TQYR HP ISAFPR YFYG LL+DG+NV +PAY +P+H+  PAF P  F ++ S         RE  G  S  N  E  L VN+Y TLR       +RGKVGVITPY  Q+ EL   FARA G  Y  +VE+NTVDG QG+EKD+I+ S VRA  ++G+GFL+D+RRMNV LTR + A  V+G   TL+ +  W+ALLDH R+    V V +P  NLL L+ GG 
Sbjct:  831 YKDIAQRINLCLERANTLRLEWQRYSIVRQALQNNKRVPKETQEQLESSFLESAHIVFTTLSSAGHRALDDSNRYDILVIDEAAQAVELSTIIPMRFGSKQCVLVGDPQQLSATVFSRTSAQSLYERSLFERLESCGHPVHMLRTQYRSHPTISAFPRAYFYGGLLQDGDNVKTPAYIKPYHSLAPAFLPLVFWNIVS--------SRESAGPSSRSNQMEIELAVNLYLTLRNACPPDAIRGKVGVITPYAFQMEELKKAFARACGGDYAHDVEINTVDGYQGREKDIIILSTVRADPRKGVGFLSDIRRMNVALTRAKFACYVIGSEATLKSSKPWRALLDHTRSAQCMVHVTNPQENLLQLRPGGD 1191          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|298715587|emb|CBJ28140.1| (hypothetical protein Esi_0092_0081 [Ectocarpus siliculosus])

HSP 1 Score: 353.599 bits (906), Expect = 5.763e-103
Identity = 217/504 (43.06%), Postives = 277/504 (54.96%), Query Frame = 0
Query:  150 VRMGRFGSEKVRAVSLDQQVDALLLEPDKSLQNRCLQGRSHLAALTQALVLARHRYRQLVKAMREGGGQGGRVLPYGWDARVEDSGTVIFFAPETGQT-SQDFPTLPALGGREGGQGLTGRRLEQLGAY---------QAYCGEVTRLVEQIENLSLEVGRGEVRLLGMGPGAGPDR---LRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAFPAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKG---------QGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHP 631
            V  G  GS+ V AV L  QV A L +  + L +R  +    +  L + +  +    R L+K +          +P GW+ARV+ +   +FF     QT S   P  PA        G+    +E +  Y         Q Y   +TR +E+ E L+ E      RL          R   +R  LE  + D AH+V +TLN++G   +   + F V+VVDEAAQ++E ST+IPL+ G   CVLVGDP QLPATVFS  G  + ++RSLF+RLE   HPV +LD QYRMHP ISAFP   FY   LKDG NV  PAYSR +H  P FQPF F DL +      ++ R GGGG S  N  EA L VNVY TL+R   G          G+ G+VGVI+PY  Q+  L  +F  +LG  + E+VE++TVD  QG+EKDVI+ S VRA G RGIGFLADVRRMNV LTR R  + VVG AE L  N  WK L D A +    VKV  P
Sbjct:  292 VGTGNIGSQ-VHAVHLQSQVRAALGQTVQELSDRLARVSMRMMELREMIGRSLELLRVLIKGVE-------HEVPRGWEARVDRNTFTVFFVNHDNQTTSLQPPERPA-----PDSGVETVAVESMPEYTVRTAESKNQTYAFHLTRDLEEYERLNKE----HKRLTFAARAKTETREHSVRQSLEVTLLDEAHLVFSTLNSSGLPCMDQTSPFEVLVVDEAAQSVEVSTIIPLRLGCRHCVLVGDPNQLPATVFSQGGKLSQYDRSLFQRLEANDHPVQMLDVQYRMHPTISAFPSATFYDGKLKDGGNVSMPAYSRAFHTHPIFQPFMFFDLTTG-----EQTRRGGGG-SLSNPMEAMLAVNVYVTLKRSFGGVGERGSGDEHGIAGRVGVISPYAKQIKVLKEKFEESLGRGWHEQVEISTVDAFQGREKDVIIVSTVRAAGSRGIGFLADVRRMNVALTRARHGLFVVGSAEALSVNPKWKELADLAESREGLVKVTDP 772          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|669171319|ref|XP_008621008.1| (hypothetical protein SDRG_16570 [Saprolegnia diclina VS20] >gi|530727310|gb|EQC25552.1| hypothetical protein SDRG_16570 [Saprolegnia diclina VS20])

HSP 1 Score: 350.517 bits (898), Expect = 4.530e-102
Identity = 184/384 (47.92%), Postives = 241/384 (62.76%), Query Frame = 0
Query:  277 YQAYCGEVTRLVEQIENLSLEVGRGE-VRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAF-PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRG----------GGKGGGR 648
            Y+     +   +E+   + LE  R   VR         P   + +LE++  +SAHIV TTL++AG  ++    R+ ++V+DEAAQA+E ST+IP++ G++ CVLVGDPQQL ATVFS   A + +ERSLFERLE  GHPVH+L TQYR HP ISAFPR YFYG LL+DG+NV +PAY +P+H+  PAF P  F ++ S         RE  G  S  N  E  L VN+Y TLR       +RGKVGVITPY  Q+ EL   FAR  G  Y  +VE+NTVDG QG+EKD+I+ S VRA  ++G+GFL+D+RRMNV LTR + A  V+G   TL+ +  W+ALLDH R+    V V +P  NLL L+ G          GG+G GR
Sbjct:  823 YKDIAQRINLCLERANTIRLEWQRYSIVRQALQNNKRVPKETQEQLESSFLESAHIVFTTLSSAGHRALDDSNRYDILVIDEAAQAVELSTIIPMRFGSKQCVLVGDPQQLSATVFSRTSAQSLYERSLFERLESCGHPVHMLRTQYRSHPTISAFPRAYFYGGLLQDGDNVKTPAYIKPYHSLAPAFLPLVFWNIVS--------SRESAGPSSRSNQMEIELAVNLYLTLRNACPPDAIRGKVGVITPYAFQMEELKKAFARVCGGDYAHDVEINTVDGYQGREKDIIILSTVRADPRKGVGFLSDIRRMNVALTRAKFACYVIGSEATLKSSKPWRALLDHTRSAQCMVHVTNPQENLLQLRPGGDPPRRPVNFGGRGRGR 1198          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|1210527378|dbj|GAX14013.1| (senataxin [Fistulifera solaris])

HSP 1 Score: 347.436 bits (890), Expect = 7.356e-102
Identity = 198/492 (40.24%), Postives = 280/492 (56.91%), Query Frame = 0
Query:  150 VRMGRFGSEKVRAVSLDQQVDALLLEPDK--SLQNRCLQGRSHLAALTQALVLARHRYRQLVKAMREGGGQGGRVLPYGWDARV-----EDSGTVIFFAPETGQTSQDFPTLPALGGREGGQGLTGRRLEQLGAYQAYCGEVTRLVEQIENLSLEVGRGEVRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAF-----PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVP 629
            +R+G   S+ VRAVSL+ +VDA+L E     SL+   +  +  L  +TQ +   R R    + A++         L   W+ R+     ED+G V +   +   T+ D P  P        Q    R + +   Y++Y   + +LVE   ++  E+ R  +    +  GA    +R  +ET++ +S H+V+TTL TAG  ++    +F VVVVDEAAQ++EP++L  LQ G   CVLVGDPQQLPAT+F+  G  + ++RSLF+RLE  G PV++L+ QYRMHP IS FPR  FYG  L DG NV    Y  P  +      P FQPF  LDL S         +E  GG S  NSAEARL V +YQ L+   +G     +V +ITPY  Q+  L   F+  LG +Y+  VE+NTVD  QG+E ++++FS VRA G  GIGFL+DVRRMNV LTR +  + V+ R E++  N +W+ L+ HAR T A ++VP
Sbjct:  571 IRVGVGQSDAVRAVSLEAKVDAILGEYSDISSLEQSIVGFKVELTRITQDIASLRRR----LHAIQHCSPYS---LSKDWEIRIDEESFEDTGRVYYVNHKLKLTTYDLPPPPD----PSEQVFPSRSMPE---YRSYLSRIVKLVENYFSVKSELERCTIISGAVANGANHIEIRQNMETHVLNSVHMVMTTLGTAGNRTLEGIDKFEVVVVDEAAQSVEPASLSALQLGNRHCVLVGDPQQLPATIFNVSGRGSKYDRSLFQRLEEAGQPVYMLNEQYRMHPKISHFPRHIFYGGALLDGPNVRQGDYGDPLRSILCRSVPNFQPFTILDLDS---------KEERGGTSLANSAEARLCVYIYQQLKTLTRGLSTTTRVAIITPYAEQMRLLRKTFSNELGRNYEAFVEVNTVDAFQGREANIVIFSAVRASGSHGIGFLSDVRRMNVALTRAKHFLFVIARCESIVVNPYWRDLVQHARATNAVIQVP 1039          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|1210523740|dbj|GAX17422.1| (senataxin [Fistulifera solaris])

HSP 1 Score: 345.895 bits (886), Expect = 2.321e-101
Identity = 199/496 (40.12%), Postives = 281/496 (56.65%), Query Frame = 0
Query:  150 VRMGRFGSEKVRAVSLDQQVDALLLEPDK--SLQNRCLQGRSHLAALTQALVLARHRYRQLVKAMREGGGQGGRVLPYG----WDARVE-----DSGTVIFFAPETGQTSQDFPTLPALGGREGGQGLTGRRLEQLGAYQAYCGEVTRLVEQIENLSLEVGRGEVRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAF-----PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVP 629
            +R+G   S+ VRAVSL+ +VDA+L E     SL+   +  +  L  +TQ +   R R    + A++          PY     W+ R++     D+G V +   +   T+ D P  P      G Q      + +   Y++Y   + +LVE   ++  E+ R  +    +  GA    +R  +ET++ +S H+V+TTL TAG  ++    +F VVVVDEAAQ++EP++L  LQ G   CVLVGDPQQLPAT+F+  G  + ++RSLF+RLE  G PV++L+ QYRMHP IS FPR  FYG  L DG NV    Y  P  +      P FQPF  LDL S         +E  GG S  NSAEARL V +YQ L+   +G     +V +ITPY  Q+  L   F+  LG +Y+  VE+NTVD  QG+E ++++FS VRA G  GIGFL+DVRRMNV LTR +  + V+ R E++  N +W+ L+ HAR T A V+VP
Sbjct:  571 IRVGVGQSDAVRAVSLEAKVDAILGEYSDISSLEQSIVGFKVELTRITQDIASLRRR----LHAIQHCS-------PYSVSKDWEIRIDEESFDDTGRVYYVNHKLKLTTYDLPPPP----EPGEQVFPSTSMPE---YRSYLSRIVKLVENYFSVKSELERCTIISGAVANGANHIEIRQNMETHLLNSVHMVMTTLGTAGNRTLEGIDKFEVVVVDEAAQSVEPASLSALQLGNRHCVLVGDPQQLPATIFNVSGRGSKYDRSLFQRLEEAGQPVYMLNEQYRMHPKISHFPRHIFYGGALLDGPNVRQGDYGDPLRSILCRSVPNFQPFTILDLDS---------KEERGGTSLANSAEARLCVYIYQQLKTLTRGLSTTSRVAIITPYAEQMRLLRKTFSNELGRNYEAFVEVNTVDAFQGREANIVIFSAVRASGSHGIGFLSDVRRMNVALTRAKHFLFVIARCESIVVNPYWRDLVQHARATNAVVQVP 1039          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|698818741|ref|XP_009842399.1| (hypothetical protein H257_15848 [Aphanomyces astaci] >gi|574102550|gb|ETV68100.1| hypothetical protein H257_15848 [Aphanomyces astaci])

HSP 1 Score: 348.977 bits (894), Expect = 7.906e-101
Identity = 180/369 (48.78%), Postives = 235/369 (63.69%), Query Frame = 0
Query:  275 GAYQAYCGEVTRL---VEQIENLSLEVGR-GEVRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAF-PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGL 638
             AY+ Y     R+   +E+  +L LE+ R   VR      G      +  LE++  +SAHIV TTL++AG  ++   +R+ ++V+DEAAQA+E ST+IP++ G+  CVLVGDPQQL ATVFS   A + +ERSLFERLE  GHPVH+L TQYR HP ISAFPR+YFYG LL+DG+NV  P Y++ +H   PAF+P  F +L S         RE    +S  N  E +L VN+Y TLR       +RGKVGVITPY AQ+ EL   F  A    +  +VE+NTVDG QG+EKD+I+ S VR+  ++G+GFL D+RRMNV LTR + A  V+G    LQ +  W ALLDHAR TG  V VP+P  NL  L
Sbjct:  848 NAYKPYKDMAQRINLCLERFHSLKLELQRYAMVRRSMEAHGRVVKETQDTLESSFLESAHIVFTTLSSAGHRALDDSSRYDILVIDEAAQAVELSTIIPMRFGSRQCVLVGDPQQLSATVFSRTSAQSLYERSLFERLESCGHPVHMLRTQYRSHPTISAFPRQYFYGGLLQDGDNVRQPTYAKMYHGLAPAFKPLVFWNLVS--------SREAMSSMSRTNPMEVKLAVNLYLTLRNSCPPDAIRGKVGVITPYAAQMDELKRAFTVACNGEFHHDVEINTVDGYQGREKDIIILSTVRSDPRKGVGFLNDIRRMNVALTRAKFACYVLGSEAALQNSTPWAALLDHARGTGCLVNVPNPQENLFTL 1208          
BLAST of EWM22523.1 vs. NCBI_GenBank
Match: gi|1173953402|gb|OQS00947.1| (hypothetical protein ACHHYP_02059 [Achlya hypogyna])

HSP 1 Score: 348.591 bits (893), Expect = 2.394e-99
Identity = 182/368 (49.46%), Postives = 232/368 (63.04%), Query Frame = 0
Query:  277 YQAYCGEVTRLVEQIENLSLEVGR-GEVRLLGMGPGAGPDRLRAELETNICDSAHIVLTTLNTAGTSSITSGARFTVVVVDEAAQAIEPSTLIPLQTGAETCVLVGDPQQLPATVFSSLGAATAFERSLFERLEHGGHPVHLLDTQYRMHPAISAFPRRYFYGKLLKDGENVFSPAYSRPWHAF-PAFQPFAFLDLKSDGGRGRDKGREGGGGLSYRNSAEARLLVNVYQTLRREAKGQGVRGKVGVITPYQAQLMELHAQFARALGPSYQEEVELNTVDGCQGKEKDVILFSCVRAGGKRGIGFLADVRRMNVGLTRGRVAMLVVGRAETLQQNLHWKALLDHARTTGAFVKVPHPGCNLLGLQRGG 642
            Y+     +   +E+   L LE  R   VR         P   + +LE++  +SAHIV TTL++AG  ++    R+ ++V+DEAAQA+E ST+IP++ G++ CVLVGDPQQL ATVFS   A + +ERSLFERLE  GHPVH+L TQYR HP ISAFPR+YFYG LL DGENV +P Y++P+H+  PAF P  F +L           RE  G  S  N  E  L VN+Y TLR       VRGKVGVITPY  Q+ EL   F RA    Y  +VE+NTVDG QG+EKD+I+ S VRA  ++G+GFL+D+RRMNV LTR + A  V+G   TL  +  W+ALLDHAR T   V V  P  NLL L+ G 
Sbjct:  831 YKDIAQRINLCLERANTLRLEWQRYSMVRQALQNNKHVPKETKDQLESSFLESAHIVFTTLSSAGHRALDDSNRYDILVIDEAAQAVELSTIIPMRFGSKQCVLVGDPQQLSATVFSRTSAQSLYERSLFERLESCGHPVHMLRTQYRSHPVISAFPRQYFYGGLLMDGENVSAPGYTKPYHSLAPAFLPLVFWNLLG--------SREKAGPASRANQMEIDLAVNLYLTLRNACPPDAVRGKVGVITPYAFQMEELKRAFKRACNGDYSHDVEINTVDGYQGREKDIIILSTVRADPRKGVGFLSDIRRMNVALTRAKYACYVIGSEATLVSSKPWRALLDHARATHCMVHVADPQENLLQLRPGA 1190          
The following BLAST results are available for this feature:
BLAST of EWM22523.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103040|gb|EWM22523.1|0.000e+0100.00helicase sen1, partial [Nannochloropsis gaditana][more]
gi|673038162|ref|XP_008873042.1|5.062e-10749.32hypothetical protein, variant 2 [Aphanomyces invad... [more]
gi|673038158|ref|XP_008873040.1|1.473e-10449.32hypothetical protein H310_08897 [Aphanomyces invad... [more]
gi|813151428|ref|XP_012201173.1|2.715e-10349.32hypothetical protein SPRG_20179 [Saprolegnia paras... [more]
gi|298715587|emb|CBJ28140.1|5.763e-10343.06hypothetical protein Esi_0092_0081 [Ectocarpus sil... [more]
gi|669171319|ref|XP_008621008.1|4.530e-10247.92hypothetical protein SDRG_16570 [Saprolegnia dicli... [more]
gi|1210527378|dbj|GAX14013.1|7.356e-10240.24senataxin [Fistulifera solaris][more]
gi|1210523740|dbj|GAX17422.1|2.321e-10140.12senataxin [Fistulifera solaris][more]
gi|698818741|ref|XP_009842399.1|7.906e-10148.78hypothetical protein H257_15848 [Aphanomyces astac... [more]
gi|1173953402|gb|OQS00947.1|2.394e-9949.46hypothetical protein ACHHYP_02059 [Achlya hypogyna... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8174rna8174Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications