EWM22534.1, cds8141 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|585103059|gb|EWM22534.1| (Thioredoxin [Nannochloropsis gaditana]) HSP 1 Score: 689.493 bits (1778), Expect = 0.000e+0 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query: 1 MTIPHRSLLTSSNFKSDSSREQNSQLVCSTDMSENLHGSHRGMYGVQSIMHVRCLCLQLYLSCSSFFSRCFPAGGRIPYPMASIKSPKRSPTASTFASYSGLKNSLTLKLVFLAMCACALVAAVHSPEDDGVDVIGTALRGDHGPRRANIMEPAALAVAAPPVAEVPPGPAQDITPEPPLLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE 335
MTIPHRSLLTSSNFKSDSSREQNSQLVCSTDMSENLHGSHRGMYGVQSIMHVRCLCLQLYLSCSSFFSRCFPAGGRIPYPMASIKSPKRSPTASTFASYSGLKNSLTLKLVFLAMCACALVAAVHSPEDDGVDVIGTALRGDHGPRRANIMEPAALAVAAPPVAEVPPGPAQDITPEPPLLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE
Sbjct: 1 MTIPHRSLLTSSNFKSDSSREQNSQLVCSTDMSENLHGSHRGMYGVQSIMHVRCLCLQLYLSCSSFFSRCFPAGGRIPYPMASIKSPKRSPTASTFASYSGLKNSLTLKLVFLAMCACALVAAVHSPEDDGVDVIGTALRGDHGPRRANIMEPAALAVAAPPVAEVPPGPAQDITPEPPLLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE 335
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|553190955|ref|XP_005855299.1| (nucleoredoxin-like protein 2 [Nannochloropsis gaditana CCMP526] >gi|422293755|gb|EKU21055.1| nucleoredoxin-like protein 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 515.383 bits (1326), Expect = 0.000e+0 Identity = 253/255 (99.22%), Postives = 255/255 (100.00%), Query Frame = 0
Query: 81 MASIKSPKRSPTASTFASYSGLKNSLTLKLVFLAMCACALVAAVHSPEDDGVDVIGTALRGDHGPRRANIMEPAALAVAAPPVAEVPPGPAQDITPEPPLLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE 335
MASIKSPKRSPTASTFASYSGLKNSLTLKLVFLAMCACALVAAVHSPEDDGVDVIGTALRGDHGPR+ANIMEP+ALAVAAPPVAEVPPGPAQDITPEPPLLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE
Sbjct: 1 MASIKSPKRSPTASTFASYSGLKNSLTLKLVFLAMCACALVAAVHSPEDDGVDVIGTALRGDHGPRQANIMEPSALAVAAPPVAEVPPGPAQDITPEPPLLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE 255
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|551659865|ref|XP_005832701.1| (hypothetical protein GUITHDRAFT_108595 [Guillardia theta CCMP2712] >gi|428176838|gb|EKX45721.1| hypothetical protein GUITHDRAFT_108595 [Guillardia theta CCMP2712]) HSP 1 Score: 96.6709 bits (239), Expect = 1.998e-20 Identity = 54/182 (29.67%), Postives = 88/182 (48.35%), Query Frame = 0
Query: 153 PAALAVAAPPVAEVPPGPAQDITPEPPLLFPADAQLQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEG------VTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWN 328
PA +A+A +A G + DA + D G + +A R+VGLYF WC M R+ P + F + + T+VFVSSD + E+ + + + +DSPLR LK+ + +W +E + RRS IP ++V+G+DG E+ + ++G+ L+ WN
Sbjct: 5 PAFMALACLSMAAASTGGEGSMNLH-------DAMVVDQDGHKMRLEDAAKGRTVGLYFAGEWCPMCRSFTPKLKEFFNEKAQDKQTGNQRATIVFVSSDFSKEAADSHFRNQGNWLYLDYDSPLRQQLKQKFRIWGGMESSSLGFDRRSGIPGMVVIGRDGNEITYMNTESKGVKALEAWN 179
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|873236942|emb|CEL98253.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 92.0485 bits (227), Expect = 2.491e-18 Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 0
Query: 201 ALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEG--VTLVFVSSD-TNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPG-KRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNYLEWKWE 335
+L +SV LYF AGWC M ++ P + +F + ++G + ++FVSSD NA +AS+ + +D PL LK +GVW+ E K G RR+ +P V+V+G DG EL ++ +G LD+W++ WE
Sbjct: 88 SLQGKSVALYFAAGWCPMCQSFTPVLRSFYQRVNTDGQKIEVIFVSSDGDNASQAAHMEASHGPWLRIDYDDPLTDKLKRQHGVWARRESHKFEGMTRRAGVPGVVVIGSDGHELQFMDTERKGGGALDQWDFEHKLWE 226
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|1072238994|gb|OEU23721.1| (putative nucleoredoxin [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.0333 bits (201), Expect = 3.600e-15 Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 0
Query: 195 LVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEG--VTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRW 327
+++ +E L ++ V LYF AGWC M + P + +F + + G + L+++SSD N E+ N ++AS L + VPF LK+ Y +W+ E + RRS +P ++V+ K G ELA + ++G L W
Sbjct: 29 VIDLDEKLKDKRVALYFTAGWCPMCTSFEPALMSFQQNAKDAGKPIELIYISSDRNEET-NIKRASQLNMYTVPFGDQTA-ELKKKYKIWAGSETFQFGFGRRSGVPAIVVLDKTGEELAFVAAESQGAKALATW 161
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|1072238993|gb|OEU23720.1| (putative nucleoredoxin [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.4185 bits (202), Expect = 3.616e-15 Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 0
Query: 195 LVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEG--VTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRW 327
+++ +E L ++ V LYF AGWC M + P + +F + + G + L+++SSD N E+ N ++AS L + VPF LK+ Y +W+ E + RRS +P ++V+ K G ELA + ++G L W
Sbjct: 35 VIDLDEKLKDKRVALYFTAGWCPMCTSFEPALMSFQQNAKDAGKPIELIYISSDRNEET-NIKRASQLNMYTVPFGDQT-AELKKKYKIWAGSETFQFGFGRRSGVPAIVVLDKTGEELAFVAAESQGAKALATW 167
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|1072238992|gb|OEU23719.1| (putative nucleoredoxin [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 82.8037 bits (203), Expect = 4.206e-15 Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 0
Query: 195 LVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEG--VTLVFVSSDTNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRW 327
+++ +E L ++ V LYF AGWC M + P + +F + + G + L+++SSD N E+ N ++AS L + VPF LK+ Y +W+ E + RRS +P ++V+ K G ELA + ++G L W
Sbjct: 57 VIDLDEKLKDKRVALYFTAGWCPMCTSFEPALMSFQQNAKDAGKPIELIYISSDRNEET-NIKRASQLNMYTVPFGDQ-TAELKKKYKIWAGSETFQFGFGRRSGVPAIVVLDKTGEELAFVAAESQGAKALATW 189
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|551573369|ref|XP_005772491.1| (hypothetical protein EMIHUDRAFT_102068 [Emiliania huxleyi CCMP1516] >gi|551604952|ref|XP_005783922.1| hypothetical protein EMIHUDRAFT_231900 [Emiliania huxleyi CCMP1516] >gi|485623931|gb|EOD20062.1| hypothetical protein EMIHUDRAFT_102068 [Emiliania huxleyi CCMP1516] >gi|485636948|gb|EOD31493.1| hypothetical protein EMIHUDRAFT_231900 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 75.8702 bits (185), Expect = 1.041e-12 Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = 0
Query: 199 NEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEG--VTLVFVSSD-TNAESLNEQQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKI-PGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRW 327
+ L + V LYF AGWC M + P + FL+ E G +L++V SD T AE+L ++A L +VPF+ +LK+ + +W+ E K+ P RRS +P ++V+ +G ELA + A+G+ L W
Sbjct: 51 TQQLGGKRVALYFSAGWCPMCTSFEPSLQQFLQASEDSGKPCSLIYVPSDRTEAEAL--RRAKGLGLLSVPFEEA--DALKKQFKIWAGAESMKLGPFGRRSGVPALVVLSSEGEELAFVPAEAQGVRALQSW 179
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|975099116|ref|XP_015264592.1| (PREDICTED: nucleoredoxin-like protein 2 [Gekko japonicus]) HSP 1 Score: 72.7886 bits (177), Expect = 6.141e-12 Identity = 46/150 (30.67%), Postives = 71/150 (47.33%), Query Frame = 0
Query: 188 LQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEG-----VTLVFVSSDTNAESLNE--QQASNLWPFAVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDG---TELARLEVGARGISELDRW 327
L + G LV+ EAL N+ VGLYF A WCS+ R P + F E +VF+SSD ++E + + Q+ W A+PF P + LK+ Y + +AIP +++V + G T+ R + RG++ W
Sbjct: 10 LMNKDGHLVDPEEALQNKIVGLYFSAAWCSLCREFTPTLCDFYSELVEEAPSPAPFEIVFISSDRSSEEMVDYMQETHGDW-LALPFHDPFKHELKKKYNI--------------TAIPKLVIVKQTGEVITDKGRKHIRERGLNCFRNW 144
BLAST of EWM22534.1 vs. NCBI_GenBank
Match: gi|1129167837|gb|OLP78913.1| (putative nucleoredoxin 1 [Symbiodinium microadriaticum]) HSP 1 Score: 73.9442 bits (180), Expect = 4.036e-11 Identity = 46/143 (32.17%), Postives = 73/143 (51.05%), Query Frame = 0
Query: 188 LQDLTGALVNANEALANRSVGLYFGAGWCSMTRAANPGVAAFLRPRESEGVTLVFVSSDTNAESLNEQQASNLWPF-AVPFDSPLRLSLKELYGVWSSLEVGKIPGKRRSAIPTVMVVGKDGTELARLEVGARGISELDRWNY 329
L D G V+ + +L +SV LYF WC M A P + F++ + V VFVSSD E ++ ++ F +VPF S ++ SLK + +W E+ K G RR IP ++V+ G E L+ ++G + L ++
Sbjct: 121 LLDAEGKEVDGS-SLEGKSVALYFAGEWCPMCTAFTPVLTEFMKDVGDKAV--VFVSSDFTKEEYDQHRSHLPSQFLSVPFGSEMQDSLKRKFHLWGGREIPKYGGDRRGGIPALVVITPGGEEQKYLDAESKGGAALKHRHH 260 The following BLAST results are available for this feature:
BLAST of EWM22534.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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