EWM30559.1, cds81 (CDS) Nannochloropsis gaditana

Overview
NameEWM30559.1
Unique Namecds81
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:224151..227570 -

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Properties
Property NameValue
Protein idEWM30559.1
Productbzip transcription factor
Orig transcript idgnl|cribi|Naga_100033g5.8398.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:224151..227570 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
Homology
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BLAST of EWM30559.1 vs. NCBI_GenBank
Match: gi|585113226|gb|EWM30559.1| (bzip transcription factor [Nannochloropsis gaditana])

HSP 1 Score: 2315.81 bits (6000), Expect = 0.000e+0
Identity = 1139/1139 (100.00%), Postives = 1139/1139 (100.00%), Query Frame = 0 
Query:    1 MRQERQPGSKGGDAGTEPSRPPPATSSASLARTGTDEPERNREATDRKTLTTPALQGTGRANVVPLLPRPVTSRAMCVPNPDVTGQGAPPSGSCSHSIAPNSKSCQPHSSSNAFRPGQYYAEAGTAARTAHLHSLNGNDRSAGLSAVQSSVPHEQDVNISSQQALPRNLYASVHPGGGVRDLPPERAIKGSGDGRTRADQGHLPARDQRGELTPQSITDFMRLQAFMTGDQKATVFHPDYAHSPPSSLPRASVLSSTSAPLPPHPGTMSSLSHHHQAHAQPIYSHTCHHSSRSFQPTLALATGASKGVGEASRPGGIDYQYNGVEESRVHLQHPHPNHYHHHHHPSHPAYSHALSPYKGPTLSSIPHPATLSKVYAPYLLQREHRSHPPPSFPGESFSLPVLSKEDEKKRFKRALNRESAQRCRKRKRDLVEDLIEANKLFSTHAAILDGLGSTCIEFEYSSGEVISAHGTKQVLGWPSPSLRGRCVYDLLVPESKTRVQRLMSQLVMDWQAAIKEASSSRRDAREEGRDILEGASNGNKAEDPGFTRSWETALSEVSEEGSGERVTGREGADAKRSQASTASSSFSSSPSCPATFSGTDAHSDHSSGKSGDKSSSEEAASESTESNGPANLYDPVNGDSSRPNVGRNKGTEEKHRSQTARALNQGRNLTEEASAGLEVAAAMAELAKGYRRDADGDEEDGEEDDGEASSMDSCVGHVDEREPPPLKGGGSRRTKAAVAAAAVMADKAGASERKGSSGGNTKPGITGRRRAHGQDAQDKEGTCAGLPSSEKRPPGLATTGTPRKTSVAGVSGIGLGGKATVSIPTAGGRVLTRDVWELAQVPCALPAIQGREDASEPSGSSSNSPGTSSSQTFTSREPGSSTNSNIAQILPAGHPASNEFMFQIANVTFKTQNGGARFGDINGVVTLDGQGAAEVTQNSSGPEAECVWSIRFHDGKERAGHNHSWGMHVHRRHTIQDDINTNRAEIAIMGSSRPVSSSSASATTSSSSSSSTSSLSALCVSSNDTETAPSKKGATGDNDTNSFESSQGGGSHGSDEGSFSSSDDNGPLGAPHGSAKMPVTTFRSGSSNNSMDNCNSSSGSSGSSGRSDGSGGSGGGKETAKEAMEGPWSRASEPSMDVE 1139
            MRQERQPGSKGGDAGTEPSRPPPATSSASLARTGTDEPERNREATDRKTLTTPALQGTGRANVVPLLPRPVTSRAMCVPNPDVTGQGAPPSGSCSHSIAPNSKSCQPHSSSNAFRPGQYYAEAGTAARTAHLHSLNGNDRSAGLSAVQSSVPHEQDVNISSQQALPRNLYASVHPGGGVRDLPPERAIKGSGDGRTRADQGHLPARDQRGELTPQSITDFMRLQAFMTGDQKATVFHPDYAHSPPSSLPRASVLSSTSAPLPPHPGTMSSLSHHHQAHAQPIYSHTCHHSSRSFQPTLALATGASKGVGEASRPGGIDYQYNGVEESRVHLQHPHPNHYHHHHHPSHPAYSHALSPYKGPTLSSIPHPATLSKVYAPYLLQREHRSHPPPSFPGESFSLPVLSKEDEKKRFKRALNRESAQRCRKRKRDLVEDLIEANKLFSTHAAILDGLGSTCIEFEYSSGEVISAHGTKQVLGWPSPSLRGRCVYDLLVPESKTRVQRLMSQLVMDWQAAIKEASSSRRDAREEGRDILEGASNGNKAEDPGFTRSWETALSEVSEEGSGERVTGREGADAKRSQASTASSSFSSSPSCPATFSGTDAHSDHSSGKSGDKSSSEEAASESTESNGPANLYDPVNGDSSRPNVGRNKGTEEKHRSQTARALNQGRNLTEEASAGLEVAAAMAELAKGYRRDADGDEEDGEEDDGEASSMDSCVGHVDEREPPPLKGGGSRRTKAAVAAAAVMADKAGASERKGSSGGNTKPGITGRRRAHGQDAQDKEGTCAGLPSSEKRPPGLATTGTPRKTSVAGVSGIGLGGKATVSIPTAGGRVLTRDVWELAQVPCALPAIQGREDASEPSGSSSNSPGTSSSQTFTSREPGSSTNSNIAQILPAGHPASNEFMFQIANVTFKTQNGGARFGDINGVVTLDGQGAAEVTQNSSGPEAECVWSIRFHDGKERAGHNHSWGMHVHRRHTIQDDINTNRAEIAIMGSSRPVSSSSASATTSSSSSSSTSSLSALCVSSNDTETAPSKKGATGDNDTNSFESSQGGGSHGSDEGSFSSSDDNGPLGAPHGSAKMPVTTFRSGSSNNSMDNCNSSSGSSGSSGRSDGSGGSGGGKETAKEAMEGPWSRASEPSMDVE
Sbjct:    1 MRQERQPGSKGGDAGTEPSRPPPATSSASLARTGTDEPERNREATDRKTLTTPALQGTGRANVVPLLPRPVTSRAMCVPNPDVTGQGAPPSGSCSHSIAPNSKSCQPHSSSNAFRPGQYYAEAGTAARTAHLHSLNGNDRSAGLSAVQSSVPHEQDVNISSQQALPRNLYASVHPGGGVRDLPPERAIKGSGDGRTRADQGHLPARDQRGELTPQSITDFMRLQAFMTGDQKATVFHPDYAHSPPSSLPRASVLSSTSAPLPPHPGTMSSLSHHHQAHAQPIYSHTCHHSSRSFQPTLALATGASKGVGEASRPGGIDYQYNGVEESRVHLQHPHPNHYHHHHHPSHPAYSHALSPYKGPTLSSIPHPATLSKVYAPYLLQREHRSHPPPSFPGESFSLPVLSKEDEKKRFKRALNRESAQRCRKRKRDLVEDLIEANKLFSTHAAILDGLGSTCIEFEYSSGEVISAHGTKQVLGWPSPSLRGRCVYDLLVPESKTRVQRLMSQLVMDWQAAIKEASSSRRDAREEGRDILEGASNGNKAEDPGFTRSWETALSEVSEEGSGERVTGREGADAKRSQASTASSSFSSSPSCPATFSGTDAHSDHSSGKSGDKSSSEEAASESTESNGPANLYDPVNGDSSRPNVGRNKGTEEKHRSQTARALNQGRNLTEEASAGLEVAAAMAELAKGYRRDADGDEEDGEEDDGEASSMDSCVGHVDEREPPPLKGGGSRRTKAAVAAAAVMADKAGASERKGSSGGNTKPGITGRRRAHGQDAQDKEGTCAGLPSSEKRPPGLATTGTPRKTSVAGVSGIGLGGKATVSIPTAGGRVLTRDVWELAQVPCALPAIQGREDASEPSGSSSNSPGTSSSQTFTSREPGSSTNSNIAQILPAGHPASNEFMFQIANVTFKTQNGGARFGDINGVVTLDGQGAAEVTQNSSGPEAECVWSIRFHDGKERAGHNHSWGMHVHRRHTIQDDINTNRAEIAIMGSSRPVSSSSASATTSSSSSSSTSSLSALCVSSNDTETAPSKKGATGDNDTNSFESSQGGGSHGSDEGSFSSSDDNGPLGAPHGSAKMPVTTFRSGSSNNSMDNCNSSSGSSGSSGRSDGSGGSGGGKETAKEAMEGPWSRASEPSMDVE 1139
The following BLAST results are available for this feature:
BLAST of EWM30559.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113226|gb|EWM30559.1|0.000e+0100.00bzip transcription factor [Nannochloropsis gaditan... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna81rna81Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications