EWM22610.1, cds8068 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|585103173|gb|EWM22610.1| (nmda receptor glutamate-binding chain [Nannochloropsis gaditana]) HSP 1 Score: 845.884 bits (2184), Expect = 0.000e+0 Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0
Query: 1 MMLPDSMDEETAPRYTQLLSAKNQENNMSVDFHPHRVQNIISFVKYREEGKPSRKLALAVESLHWVTLGRMGAMRSLLLLPCIMLSFPAATSCSTVPVEINMYHTSKSGILTGKTPTFCLLKRARGGAVGRSPGSGGSSGSVGLPSFPFFPPTTTTLTPPKSSSSSRSSASVAPAPGVWGFDHFDSRPVVLEPRVVENIKGRDSRVGLIRKVYAILGIQLFLTAAVTFVFFQKPALVSFLFTKGSWVVLLSVLASLGSAIALGMRYSRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIVGRGETQLDDRDYVLGAMDLYLDITRIFLYLLRILANENGRE 421
MMLPDSMDEETAPRYTQLLSAKNQENNMSVDFHPHRVQNIISFVKYREEGKPSRKLALAVESLHWVTLGRMGAMRSLLLLPCIMLSFPAATSCSTVPVEINMYHTSKSGILTGKTPTFCLLKRARGGAVGRSPGSGGSSGSVGLPSFPFFPPTTTTLTPPKSSSSSRSSASVAPAPGVWGFDHFDSRPVVLEPRVVENIKGRDSRVGLIRKVYAILGIQLFLTAAVTFVFFQKPALVSFLFTKGSWVVLLSVLASLGSAIALGMRYSRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIVGRGETQLDDRDYVLGAMDLYLDITRIFLYLLRILANENGRE
Sbjct: 1 MMLPDSMDEETAPRYTQLLSAKNQENNMSVDFHPHRVQNIISFVKYREEGKPSRKLALAVESLHWVTLGRMGAMRSLLLLPCIMLSFPAATSCSTVPVEINMYHTSKSGILTGKTPTFCLLKRARGGAVGRSPGSGGSSGSVGLPSFPFFPPTTTTLTPPKSSSSSRSSASVAPAPGVWGFDHFDSRPVVLEPRVVENIKGRDSRVGLIRKVYAILGIQLFLTAAVTFVFFQKPALVSFLFTKGSWVVLLSVLASLGSAIALGMRYSRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIVGRGETQLDDRDYVLGAMDLYLDITRIFLYLLRILANENGRE 421
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|1108476640|emb|CRK95409.1| (CLUMA_CG008720, isoform A [Clunio marinus]) HSP 1 Score: 145.591 bits (366), Expect = 4.401e-37 Identity = 94/276 (34.06%), Postives = 153/276 (55.43%), Query Frame = 0
Query: 148 PFFPPTTTTLTPPKSSSSSRSSASVAPAPGVWGFDHFDSRPVVLEPRVVENIKGRD-----SRVGLIRKVYAILGIQLFLTAAVTFVF-FQKPALVSFLFTKGSWVVLLSVLASLGSAIALGMRYS--RVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIV-GRGETQLDDRDYVLGAMDLYLDITRIFLYLLRIL 414
P++PP P + + A P ++ +P ++P + KG + R G IRKVY+IL +QL +T AV +F F KP + + +V +S+ + + IAL S R P N+ L +FT ESV++G ++ RY AD V++A T A GL+LFAF+ +K+D T G +LF ++I+++ G +A FF+ + +V LGA+LF +L+YDTQ ++ G+ + + +Y+ A++LYLDI +IF+Y+L IL
Sbjct: 11 PYYPPGFQQQQQPYNPAYPHQQA-----PAIYN----PQQPPYMDPEY-PDAKGFEFDDASIRRGFIRKVYSILTVQLSITLAVISLFVFHKPT--NGFIKQHHEIVWISLGVVVVTMIALACCESVRRKSPMNIIFLGIFTIAESVMMGCMSVRYSADLVMMAVGITAAVCLGLTLFAFQ--TKFDFTVCGGALFVAVIIMVIFGFVAMFFRSKTLTLVQASLGAMLFCVYLIYDTQLMLGGKHKYSISPEEYIFAALNLYLDIIQIFMYILTIL 272
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|665817191|ref|XP_008557353.1| (PREDICTED: protein lifeguard 1 [Microplitis demolitor] >gi|665817193|ref|XP_008557354.1| PREDICTED: protein lifeguard 1 [Microplitis demolitor] >gi|665817195|ref|XP_008557355.1| PREDICTED: protein lifeguard 1 [Microplitis demolitor]) HSP 1 Score: 140.584 bits (353), Expect = 1.002e-34 Identity = 90/250 (36.00%), Postives = 143/250 (57.20%), Query Frame = 0
Query: 169 SASVAPAPGVWGFDHFDSRPVVLEPRVVENIKGRDSRVGLIRKVYAILGIQLFLTAAVTFVF-FQKPALVSFLFTKG-SWVVLLSVLASLGSAIALGMRYSRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIV-GRGETQLDDRDYVLGAMDLYLDITRIFLYLLRILA 415
+A+ + PG++G + D + EP+ + + R G IRKVYAIL QL LT V +F F +P +G W L+ + SL +A R P N L LFT ES ++G L++RY + VLLA T A L++FAF+ +K+D T G++LF ++ L++ G++A F+ +I +V G +GALLFS +L+YDTQ ++ G+ + + +Y+ A++LYLD+ IF+Y+L I+
Sbjct: 68 TAAFSHQPGMYGASYGD-EALHDEPKGFD-FSDKTIRQGFIRKVYAILMCQLLLTLGVISLFLFHEPTKRYVQHHEGLFWAALVILFVSL-ICMACCTSVRRKAPMNFIFLFLFTGAESFMLGTLSSRYDSKEVLLAVGITAAICFSLTIFAFQ--TKWDFTGMGAALFVAVICLMLFGIIAMFWHGKIITIVYGTVGALLFSLYLIYDTQLMLGGKHKYSISPEEYIFAALNLYLDVINIFIYILSIIG 312
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|998521709|ref|XP_015521896.1| (PREDICTED: protein lifeguard 1-like [Neodiprion lecontei] >gi|998521711|ref|XP_015521897.1| PREDICTED: protein lifeguard 1-like [Neodiprion lecontei] >gi|998521713|ref|XP_015521898.1| PREDICTED: protein lifeguard 1-like [Neodiprion lecontei]) HSP 1 Score: 140.969 bits (354), Expect = 1.183e-34 Identity = 98/297 (33.00%), Postives = 154/297 (51.85%), Query Frame = 0
Query: 130 GRSPGSGGSSGSVGLPSFPFFPPTTTTLTPPKSSSSSRSSASVAPAP---GVWGFDHFDSRPVVLEPRVVENIKGRD-----SRVGLIRKVYAILGIQLFLTAAVTFVFFQKPALVSFLFTKGSWVVLLSVLASLGSAIALGM--RYSRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIV-GRGETQLDDRDYVLGAMDLYLDITRIFLYLLRILA 415
G +PG + P+ F PP + PP S P P G++G + E + + IKG D R G IRKVYAIL +QL +T +F P F++ ++V ++++A+ IA+ R P N L LFT E +++G ++ Y+ DAVL+AA T L++FAF+ +K+D T LF ++ILL+ + AFF K +I ++ LGAL+FS +LV+DTQ ++ G+ + + +Y+ A++LYLDI IF+Y+L I+A
Sbjct: 49 GYNPGYPPAYPGGNPPAAGFVPP----MNPPYGQVPPNSGTPFTPPPMQAGMYGTSY-------AEDPMQDEIKGFDFSEQSIRRGFIRKVYAILMVQLLITIGFIALFLFHPG-TKHWFSRHTYVFYIALIATFVLLIAMSCCSNLRRQAPMNYIFLLLFTVAEGIVLGAASSTYQVDAVLMAAGITAVVCFALTIFAFQ--TKWDFTLLSGVLFVAVIILLVFSIAAFFVKGKIFTLIYASLGALIFSVYLVFDTQLMMGGKHKYSISPEEYIFAALNLYLDIVNIFIYILTIIA 331
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|401411069|ref|XP_003884982.1| (Os03g0795800 protein, related [Neospora caninum Liverpool] >gi|325119401|emb|CBZ54954.1| Os03g0795800 protein, related [Neospora caninum Liverpool] >gi|820693936|tpe|CEL69676.1| TPA: Os03g0795800 protein, related [Neospora caninum Liverpool]) HSP 1 Score: 137.117 bits (344), Expect = 6.402e-34 Identity = 99/263 (37.64%), Postives = 143/263 (54.37%), Query Frame = 0
Query: 161 KSSSSSRSSASVAPAPGVWGFDHFDSR----PVVLEPRVVENIKGRDSRVGLIRKVYAILGIQLFLTAAVTFVF-FQKPALVSFLFTKGSWVVLLSVLASLGSAIALGMRY--SRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIVGRGETQLDDRDYVLGAMDLYLDITRIFLYLLRILAN 416
+ S + + V PAP ++D + + E I ++ R G IRKVY I+ +QL TAAVT +F F P FL T G V++ + + L ++I L SR FP N LL +FT ESVL+ +T Y VL+A T GLSLFA + KYD T++ LF L L++ G+ F + +V+ L LLFS +LV DTQ IVGRG+ +L + DY++ A+ +Y+DI IFL+LLR++A+
Sbjct: 2 DTKSENSVATGVGPAPAGRMPSYYDPEIGGAARTAQEEIDERIFTKEIRQGFIRKVYTIIALQLITTAAVTALFLFVDPVRAWFL-THGQPVIIAAGVVLLVTSIPLVCCEGASRRFPFNYLLLCVFTLAESVLVAAVTAHYSEKTVLIAVAGTAVITVGLSLFACQ--VKYDFTSWVGVLFIFALNLMIFGLFCIFLP-KWAQVLYSSLALLLFSIYLVVDTQLIVGRGKLRLSEDDYIVAALMIYVDIITIFLHLLRLVAS 260
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|873236097|emb|CEL99509.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 138.272 bits (347), Expect = 1.182e-33 Identity = 87/222 (39.19%), Postives = 126/222 (56.76%), Query Frame = 0
Query: 203 DSRVGLIRKVYAILGIQLFLTAAVTFVFFQKPALVSFLFTKGSWVVLLSVLASLGSAIALGMRY--SRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIP--EVVMGGLGALLFSAFLVYDTQRIVGRGET--QLDDRDYVLGAMDLYLDITRIFLYLLRILANEN 418
+ R G IRKVY +L IQL +T + P +FL T SW+ +L+++ + G+ IAL +R FP N LL LFTA + L+G++TT+Y AV +A T +LFA + +K D T+ G LF L++LL+ G++A FF +P + V G GAL+FS +LVYDTQ +VG + DYV A+ LY+DI IFL++L + N
Sbjct: 126 EIRHGFIRKVYTVLSIQLLITFGIGCAILYAPGAKTFL-TNNSWLFILALVLTFGTLIALSCCSGPARTFPLNYVLLLLFTAAQGFLVGVVTTQYDITAVGVAVGITAGVFIACTLFAIQ--TKIDFTSKGGYLFVALIVLLLFGIIAAFFIPTVPILQKVYGAAGALIFSLYLVYDTQLLVGGKHRTFEFSVDDYVFAALALYIDIINIFLFILMLFGGSN 344
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|676389163|ref|XP_009037860.1| (hypothetical protein AURANDRAFT_15453, partial [Aureococcus anophagefferens] >gi|323451347|gb|EGB07224.1| hypothetical protein AURANDRAFT_15453, partial [Aureococcus anophagefferens]) HSP 1 Score: 133.265 bits (334), Expect = 1.277e-33 Identity = 70/142 (49.30%), Postives = 98/142 (69.01%), Query Frame = 0
Query: 272 TNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIVGRGETQLDDRDYVLGAMDLYLDITRIFLYLLRI 413
++L L SLF ES ++G+ + YK +VLLA LQTGAA L+ +AF+ ++KYDLT GS+L AGL++L +S V K+ + + +GALLFSAF+V+DTQ +VG + QL+ DYVLGA+ LYLDI +F YLLR+
Sbjct: 28 SSLALFSLFAFAESAVVGVAASAYKLQSVLLALLQTGAATGALTAYAFQPNAKYDLTQVGSALLAGLMVLTVSTVAGVLLKVPMNSLAGSTVGALLFSAFIVHDTQLVVGGKKRQLNTSDYVLGAITLYLDIINLFFYLLRL 169
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|149632261|ref|XP_001510640.1| (PREDICTED: protein lifeguard 4 [Ornithorhynchus anatinus]) HSP 1 Score: 135.191 bits (339), Expect = 1.600e-33 Identity = 86/216 (39.81%), Postives = 125/216 (57.87%), Query Frame = 0
Query: 205 RVGLIRKVYAILGIQLFLTAAVTFVFFQKPALVSFLFTKGSWVVLLSVLASLGSAIALGMRYSRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIVGRGETQLDDRDYVLGAMDLYLDITRIFLYLLRILANENGR 420
R+ +RKVY+IL +Q+ LT VF A+ +F+ + ++L+SVL S G IAL Y PTNL LL FT E++ + + T Y+ VL A + T A GL+ A+ SK D + FG+ LFA L ILL+SG L FF E++ LGALLF F++YDT ++ + L +Y+L +++LYLDI +FL+LLR+L N +
Sbjct: 31 RMAFLRKVYSILSLQILLTTVTAAVFLYSEAVRTFV-HQSPALILVSVLGSFGLIIALTF-YRHKHPTNLYLLFGFTLLEALTVAVTVTFYEVHVVLQAFMLTAAVFLGLT--AYTLQSKRDFSKFGAGLFAFLWILLLSGFLRLFFYSETVELIFAALGALLFCGFIIYDTHSLMHK----LSPEEYILASINLYLDIINLFLHLLRVLEAVNKK 238
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|676483760|ref|XP_009063128.1| (hypothetical protein LOTGIDRAFT_220842 [Lottia gigantea] >gi|556097515|gb|ESO86167.1| hypothetical protein LOTGIDRAFT_220842 [Lottia gigantea]) HSP 1 Score: 134.806 bits (338), Expect = 2.269e-33 Identity = 83/219 (37.90%), Postives = 130/219 (59.36%), Query Frame = 0
Query: 202 RDSRVGLIRKVYAILGIQLFLTAAVTFVF-FQKPALVSFLFTKGSWVVLLSVLASLGSAIALGM--RYSRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIV-GRGETQLDDRDYVLGAMDLYLDITRIFLYLLRILAN 416
++ R+G IRKVYAIL IQL +T + +F F P V W+ L+++ ++ I L R +P N+ LL FT E VL+G + + Y+A V++A T V GL++FAF+ +K+D T +G LF L++L G+LA F+ +I +V LGALLFS +LV+DTQ ++ G+ + L +Y+ A++LYLD+ +FL++L I+ N
Sbjct: 26 KNVRLGFIRKVYAILCIQLCVTMCIMSLFLFIDP--VRIYSQHNPWIWYLAMVLTIIILIVLACCSDVRRQYPLNMILLGAFTCCEGVLLGAVASHYEAVEVIIAVGVTAIVVLGLTIFAFQ--TKWDFTMWGGILFVFLIVLFCFGILALIFQNKIVNMVYSCLGALLFSFYLVFDTQLMLGGKHKYSLSPEEYIFAALNLYLDVVNLFLFILSIVGN 240
BLAST of EWM22610.1 vs. NCBI_GenBank
Match: gi|915658634|gb|KOC61741.1| (Protein lifeguard 1, partial [Habropoda laboriosa]) HSP 1 Score: 135.961 bits (341), Expect = 3.024e-33 Identity = 83/250 (33.20%), Postives = 135/250 (54.00%), Query Frame = 0
Query: 174 PAPGVWGFDHFDSRPVVLEPRVVE-NIKGRDSRVGLIRKVYAILGIQLFLTAAVTFVF-FQKPALVSFLFTKGSWVVLLSVLASLGSAIALGMRYSRVFPTNLGLLSLFTAGESVLIGLLTTRYKADAVLLAALQTGAAVTGLSLFAFRKDSKYDLTAFGSSLFAGLLILLMSGVLAFFFKIRIPEVVMGGLGALLFSAFLVYDTQRIVGRGET-QLDDRDYVLGAMDLYLDITRIFLYLLRILANENGR 420
P PG++G + + +P V + + R G IRKVY+IL QL +T ++ +F + +P + + ++++ L + R P N L +FT ES L+G +++ YK++ VLLA T A L+LF+F+ +KYD TA LF L I ++ G++A ++ R +V +GALLFS +LVYDTQ ++G G Q+ +Y+ ++LY+DI IFL++L IL + G
Sbjct: 50 PQPGMFGSTYSEDHA---QPEVKRFDFSEKSIRNGFIRKVYSILMCQLLITVSMIALFLYHQPTRKWVMVHPEMLWICIALIIVLTICMVCCTTVRRKTPMNFVFLFIFTIAESFLLGTISSLYKSEEVLLAVGITAAVCLALTLFSFQ--TKYDFTALNGILFVALFIFIIFGIVAMIWQGRTMTIVYSSIGALLFSVYLVYDTQMLMGGGHKYQISPEEYIFATLNLYVDIINIFLHILAILGSSRGN 294 The following BLAST results are available for this feature:
BLAST of EWM22610.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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