EWM22618.1, cds8056 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|585103182|gb|EWM22618.1| (EAP30 family protein [Nannochloropsis gaditana]) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSLWEEGLCQTQRDRVTGQGGREEGDNRSPG 267
MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSLWEEGLCQTQRDRVTGQGGREEGDNRSPG
Sbjct: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSLWEEGLCQTQRDRVTGQGGREEGDNRSPG 267
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|299473151|emb|CBN78727.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 249.595 bits (636), Expect = 2.602e-79 Identity = 128/254 (50.39%), Postives = 176/254 (69.29%), Query Frame = 0
Query: 16 VKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGV-------------------DPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQ---KRRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLD------AQGADGSREVYWFPSLWE 241
++AF ++GK + EEN++H++G+MATFK SLE+FARK+KKDIN +P R +F MCA IG D N+GFWA++LGVGDFYYELAVQI+E+CL TRS+NGGL+ L +L QR++ R+K +IST+D++ A +K+ +LG+GFS+L+ GKTT+VVSVP ELSSDH+A+L +A+AS +T ++ +KLQW R R LD +MQ GMAW+D A G G R Y+FPSLW+
Sbjct: 4 TRQAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGCERGRGKERDIARGVEGAKRDRDMHNRGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISTDDVRRATSKLQVLGSGFSVLEIGKTTMVVSVPRELSSDHSAVLLLAEAS-GRITEADISEKLQWEGGRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGRPAYFFPSLWQ 256
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|857976209|emb|CEO97697.1| (hypothetical protein PBRA_005811 [Plasmodiophora brassicae]) HSP 1 Score: 246.128 bits (627), Expect = 3.816e-78 Identity = 118/241 (48.96%), Postives = 159/241 (65.98%), Query Frame = 0
Query: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRR--KVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSL 239
MRRG GV +K++++ F GKE+++ + HV +A FKE LE FA KH+ +I +NP RA+F KMC+ IGVDPLASNKGFW++LLGVGDFYYEL+VQIIEICL TR NGGL+ L +L R+++RR IS +D++ AI KV LG GF ++ +++SVPTE + DH +L +AQ SD H ++ L LQW E R L L++ G+AW+D D + YWFPSL
Sbjct: 1 MRRGVGVGGLKKQKEAAAKFRQAGKEIEQTQMAHVRASLAVFKEKLESFAIKHRNEIRSNPQFRAQFAKMCSKIGVDPLASNKGFWSELLGVGDFYYELSVQIIEICLATRPQNGGLLSLMELLTRLERRRGASAQAISVDDVRRAIEKVQTLGKGFGIVHVDNRPMILSVPTEFNRDHTDVLAVAQQSDGHTSLQVLGTALQWPEARCEKVLQLLLDLGIAWVDCY--DPQKHEYWFPSL 239
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|831772485|ref|XP_012753618.1| (hypothetical protein SAMD00019534_063440 [Acytostelium subglobosum LB1] >gi|735854250|dbj|GAM23169.1| hypothetical protein SAMD00019534_063440 [Acytostelium subglobosum LB1]) HSP 1 Score: 242.276 bits (617), Expect = 8.438e-77 Identity = 114/242 (47.11%), Postives = 167/242 (69.01%), Query Frame = 0
Query: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRR--KVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSLW 240
MRRG G+++I ++ Q ++ ++ ++L + + V + TFK +LE+FA KHKKDI NP R F MC+ IGVDPLASNKGFW+Q+LGVGDFYY+LAVQIIE+CL RS NGGLI L+ LT+ ++K R ++IS +D++++I+K+ +LG G+++ + +V SVP EL+ DH +L AQ+ + +T +L KL W E+R+ LD+++ GMAW+D Q AD +YWFPSLW
Sbjct: 1 MRRGVGIQAIHKQSQHQKQLQNISEQLSTDQLKKVNEQLITFKNNLEEFALKHKKDIIKNPEFRKHFQDMCSTIGVDPLASNKGFWSQVLGVGDFYYQLAVQIIEVCLKYRSTNGGLIELTTLTEHIRKMRGKSANEISNDDVEVSISKLKVLGNGYNIFKIDSKKIVQSVPVELNKDHTEVLIKAQSHNGSITAAQLA-KLGWNEQRINNVLDVLLTEGMAWIDDQ-ADTKERLYWFPSLW 240
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|569423077|gb|ETO29770.1| (vacuolar-sorting protein [Reticulomyxa filosa]) HSP 1 Score: 239.58 bits (610), Expect = 1.251e-75 Identity = 115/225 (51.11%), Postives = 156/225 (69.33%), Query Frame = 0
Query: 24 GKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRR--KVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSLWEEGLCQ 246
G ++QE I + ++TFKE LE+FARKHKK+IN +P RA+FN MC IGVDPLASNKGFWA +LGVGDFYYEL+VQI+ +CL TR++NGGLI + +L+ +VQ++R + +S +DIK AI+KV LG GF L+ G T+V SVP EL+ DH+AIL + ++ + TV ++ + L W E R++ L+LM+Q GM W D Q G +YW PSLW Q
Sbjct: 32 GAQIQEAKIAEMRQSLSTFKEKLEEFARKHKKEINKDPAFRAQFNDMCLKIGVDPLASNKGFWADILGVGDFYYELSVQIVTVCLQTRNVNGGLIDIYELSHKVQEKRSKQSSAVSLDDIKQAISKVKSLGNGFGLITVGDKTMVKSVPVELNRDHSAILGVC-SNTACTTVPDIKKNLGWPEHRIKEVLELMLQEGMVWTDDQNDQGKETLYWIPSLWNANASQ 255
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|330842999|ref|XP_003293453.1| (hypothetical protein DICPUDRAFT_42052 [Dictyostelium purpureum] >gi|325076221|gb|EGC30026.1| hypothetical protein DICPUDRAFT_42052 [Dictyostelium purpureum]) HSP 1 Score: 236.884 bits (603), Expect = 8.758e-75 Identity = 112/244 (45.90%), Postives = 160/244 (65.57%), Query Frame = 0
Query: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRR--KVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSLWEE 242
MRRG G++++ + Q ++ ++ ++ ENIN + + FKE+LE FA KHKKDI NP R F MC IGVDPLASNKGFW+Q+LGVGDFYY L VQIIEICL R NGGL+ ++ L ++K R +IS +DI+ +I+K+ +LG GF++++ K LV SVP EL+ DH I+ +AQ ++S +T ++ QKL+W R+ L+ ++Q M W+D Q + +YWFPSLW E
Sbjct: 1 MRRGVGIQAVHNQTQTQKQLQNVSDQISTENINKIKEQLVIFKENLEQFAIKHKKDITKNPEFRKYFQDMCNMIGVDPLASNKGFWSQVLGVGDFYYTLGVQIIEICLKYRGSNGGLMEMNILADHLRKLRGKNSQEISLDDIETSISKLKVLGNGFNIIKVNKKKLVQSVPCELNKDHTDIIILAQENNSSITESQISQKLKWNNHRINSVLNFLLQESMVWIDDQSTET---IYWFPSLWSE 241
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|1072945182|ref|XP_018483182.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1-like [Raphanus sativus]) HSP 1 Score: 233.802 bits (595), Expect = 1.821e-73 Identity = 116/241 (48.13%), Postives = 165/241 (68.46%), Query Frame = 0
Query: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRRKVDK--ISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSL 239
MRR G+ +++ ++ + LG+ + + + + +ATFK LE+FARKHK DI NP RA+F++MCA +GVDPLASNKGFWA+LLG+GDFYYEL VQIIE+C+ TRSLNGGLI L +L +++RRK D+ ++ +D AI+K+ +LG+GF ++ GK LV SVPTEL+ DH IL++AQ VTV E+ ++L W RV ALD +++ G+A +D DG + YWFP +
Sbjct: 1 MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLATFKSQLEEFARKHKNDIRKNPAFRAQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSLNGGLISLQELCSHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHNQILELAQGQ-GFVTVEEVQRRLSWSSGRVIDALDTLLEEGLAMIDNGNKDGICQ-YWFPCV 239
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|1072912210|ref|XP_018455301.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Raphanus sativus]) HSP 1 Score: 233.802 bits (595), Expect = 1.944e-73 Identity = 115/241 (47.72%), Postives = 165/241 (68.46%), Query Frame = 0
Query: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRRKVDK--ISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSL 239
MRR G+ +++ ++ + LG+ + + + + +ATFK LE+FARKHK DI NP RA+F++MCA +GVDPLASNKGFWA+LLG+GDFYYEL VQIIE+C+ TRSLNGGLI L +L +++RRK D+ ++ +D AI+K+ +LG+GF ++ GK LV SVPTEL+ DH IL++AQ VTV E+ ++L W RV AL+ +++ G+A +D DG + YWFP +
Sbjct: 1 MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLATFKSQLEEFARKHKNDIRKNPAFRAQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSLNGGLISLQELCSHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHNQILELAQGQ-GFVTVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGSKDGKCQ-YWFPCV 239
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|217074064|gb|ACJ85392.1| (unknown [Medicago truncatula] >gi|388492282|gb|AFK34207.1| unknown [Medicago truncatula]) HSP 1 Score: 233.417 bits (594), Expect = 2.550e-73 Identity = 115/241 (47.72%), Postives = 162/241 (67.22%), Query Frame = 0
Query: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRRKVDK--ISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSL 239
MRR G+ ++ ++ + LG+ + + + + ++TF+ LEDFARKHK DI NP R++F++MCA +GVDPLASNKGFWA+LLG+GDFYYEL VQI++ICL TR LNGGLI L +L Q +++RRK D+ +S +D AI+K+ +LG+GF ++ GK LV SVPTEL+ DH IL++AQ VTV E+ ++L W R ALD ++ G+A +D DG R YWFP +
Sbjct: 1 MRRRPGIGGLQTAAAARDQYKKLGENVAKTRTDMMREQLSTFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPLNGGLINLQELCQLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHNEILELAQGQ-GFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRR-YWFPCV 239
BLAST of EWM22618.1 vs. NCBI_GenBank
Match: gi|922342380|ref|XP_013448115.1| (vacuolar sorting protein SNF8 [Medicago truncatula] >gi|657377237|gb|KEH22142.1| vacuolar sorting protein SNF8 [Medicago truncatula]) HSP 1 Score: 233.417 bits (594), Expect = 2.752e-73 Identity = 115/241 (47.72%), Postives = 164/241 (68.05%), Query Frame = 0
Query: 1 MRRGYGVKSIKRKEQVKEAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQKRRKVDK--ISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGADGSREVYWFPSL 239
MRR G+ ++ ++ + LG+ + + + + ++TF+ LEDFARKHK DI NP R++F++MCA +GVDPLASNKGFWA+LLG+GDFYYEL VQI++ICL TR LNGGLI L +L+Q +++RRK D+ +S +D AI+K+ +LG+GF ++ GK LV SVPTEL+ DH IL++AQ VTV E+ ++L W+ R ALD ++ G+A +D DG R YWFP +
Sbjct: 1 MRRRPGIGGLQTAAAARDQYKKLGENVAKIRTDMMKEQLSTFRSQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPLNGGLINLQELSQLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHNEILELAQGQ-GFVTVDEVEKRLSWILGRAIDALDTLLDEGLAMIDDGHKDGKRR-YWFPCV 239 The following BLAST results are available for this feature:
BLAST of EWM22618.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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