EWM22620.1, cds8053 (CDS) Nannochloropsis gaditana

Overview
NameEWM22620.1
Unique Namecds8053
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:512426..513530 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22620.1
Producthistidine acid
Partialtrue
Orig transcript idgnl|cribi|Naga_100023g66.3936.mrna
GbkeyCDS
End range.
End range513530
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:512426..513530 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003993acid phosphatase activity
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam
IPR000560His_Pase_superF_clade-2
Homology
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|585103185|gb|EWM22620.1| (histidine acid, partial [Nannochloropsis gaditana])

HSP 1 Score: 733.406 bits (1892), Expect = 0.000e+0
Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
Query:    1 MRLCFLSFSSIFRVRSLRNGKLASVLVIGGLSSVSSGTGMAARETNTTGASCAGSSSTRIACSTPTSSPSSHSTHHSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAELASRHFDMPRAHVEDMTREAFARLGLVPHPEPASAKVDPAVPPPAPPLPRALEPSARGVDLPRRPRPTPTPSGER 368
            MRLCFLSFSSIFRVRSLRNGKLASVLVIGGLSSVSSGTGMAARETNTTGASCAGSSSTRIACSTPTSSPSSHSTHHSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAELASRHFDMPRAHVEDMTREAFARLGLVPHPEPASAKVDPAVPPPAPPLPRALEPSARGVDLPRRPRPTPTPSGER
Sbjct:    1 MRLCFLSFSSIFRVRSLRNGKLASVLVIGGLSSVSSGTGMAARETNTTGASCAGSSSTRIACSTPTSSPSSHSTHHSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAELASRHFDMPRAHVEDMTREAFARLGLVPHPEPASAKVDPAVPPPAPPLPRALEPSARGVDLPRRPRPTPTPSGER 368          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|553180255|ref|XP_005853373.1| (histidine acid, partial [Nannochloropsis gaditana CCMP526] >gi|422295690|gb|EKU22989.1| histidine acid, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 301.982 bits (772), Expect = 3.731e-100
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0
Query:   40 MAARETNTTGASCAGSSSTRIACSTPTSSPSSHSTHHSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDL 187
            MAARE NTTGASCAGSSSTRIACSTPTSSPSSHSTHHSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDL
Sbjct:    1 MAAREINTTGASCAGSSSTRIACSTPTSSPSSHSTHHSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDL 148          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|551664814|ref|XP_005835170.1| (histidine acid phosphatase [Guillardia theta CCMP2712] >gi|428179318|gb|EKX48190.1| histidine acid phosphatase [Guillardia theta CCMP2712])

HSP 1 Score: 97.0561 bits (240), Expect = 1.098e-18
Identity = 72/249 (28.92%), Postives = 118/249 (47.39%), Query Frame = 0
Query:   51 SCAGSSSTRIACSTPTSSPSSHSTHHSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYD-----EHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAEL 294
            SCA        CS   +S  + S    Y  +DG       + +L QV+++ RHGDR PI ++ G  VQ + E +++W SK+   + V  W       D +   + ++       P+ QLT++GA +++ +G  LR+RYV DL +LP  L A                       S    F++ R+T   RT QS QNLLLGLYP+       S +A  + I+ +  A + +   +D+ C R   +++++
Sbjct:   19 SCAAQ------CSEEEASCKTGS---RYILKDG-----KKALELVQVIVVHRHGDRTPITKSAGSFVQ-TEELKSIWSSKINGHESVRRW--GVSNRDDTGTYITHNISSSSSWPFGQLTKRGAAQMRRVGAELRERYVGDLNFLPVDLPAD---------------------HSEEKFFIYVRSTRYPRTVQSVQNLLLGLYPEDT-RLEESGAAGVITIESQEKALDHMTGLSDKRCPRVRSLLSQI 228          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|298710942|emb|CBJ32253.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 76.6406 bits (187), Expect = 6.890e-12
Identity = 70/241 (29.05%), Postives = 104/241 (43.15%), Query Frame = 0
Query:   54 GSSSTRIACSTPTSSPSSHSTHHSYRPRDGLYTAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPS-SSPPSFLHARATNIRRTQQSAQNLLLGL-YPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIA 292
            G +S   A ++  S   S +  HS+R     + A P   +L+QVV+I RHGDRAP++ ++G+ + D P++  LW SKLP  +E                   YD         +GA+EL+ +G  LR                  G              S  P    +  S +  R T ++RT QSAQN+L GL   DG            + + VRP   ETL+P+  R+  +Q  +IA
Sbjct:   62 GGASEEEASTSVCSPRDSGTNKHSFRSTG--HPAVPDGLRLKQVVVICRHGDRAPVSSSLGKILDDGPDSVKLWNSKLPPKEE------------------RYDPP-------RGAEELRLVGEGLR------------------GVLEGGGDEGVGGEGSLFPAGLEAEKSAIFVRCTRLKRTHQSAQNMLEGLGLKDG------------VDLYVRPPERETLWPS-KRNRGKQDRLIA 244          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|695444332|ref|XP_009533945.1| (hypothetical protein PHYSODRAFT_563940 [Phytophthora sojae] >gi|348671379|gb|EGZ11200.1| hypothetical protein PHYSODRAFT_563940 [Phytophthora sojae])

HSP 1 Score: 71.633 bits (174), Expect = 3.938e-10
Identity = 73/255 (28.63%), Postives = 104/255 (40.78%), Query Frame = 0
Query:   86 TAPPSSFKLQQVVIIARHGDRAPIARNVGQAVQDSPETQALWLSKLPSSQEVE-AWTSAFPL-AD----PSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAELASRHFDMPRAHVEDMTREAFARLGL-------VPHPEPAS 327
            TA      L+ V+I  RHGDR P+  ++G  VQ + + +  W SK+  ++++E    +A P+ AD    P +RP    + PY  LT+KG + +   GR LR+RY   L                   G   A       SS P            RT +S Q LL G + D       SS AP     VR      L P        + E+I      H D+ R   + + R+A  +LGL       VP  +P S
Sbjct:    7 TAGSRDLTLRHVLIFHRHGDRTPVLTSIGTKVQATQDEKDFWASKVAIAEQLELLLQTAKPVGADETQPPVIRPSKEAQFPYGLLTQKGVKHMTGKGRALRERYGQLLD------------------GAVKAKDVYVLSSSVP------------RTIESVQCLLRGFFYDDDEQVEQSSKAPQFL--VRTYTRNVLAPMHPLQVFNEIELIV-----HDDVLRLRSK-IERDAMEKLGLHLRDCLGVPDDQPLS 223          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|1172609429|gb|OQO21586.1| (hypothetical protein B0A51_12072 [Rachicladosporium sp. CCFEE 5018])

HSP 1 Score: 71.2478 bits (173), Expect = 6.682e-10
Identity = 68/232 (29.31%), Postives = 97/232 (41.81%), Query Frame = 0
Query:   89 PSSFKLQQVVIIARHGDRAPIA---RNVGQA-----VQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPY---------------AQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAELASR 297
            P S +L+QV ++ RHG+R P++   +N G A      Q + E ++  +S   SS +  AW     + D  L P    + P                 +LT +G +   ALG  LR  YV  L +LP+ L+A    A                        ++ RAT I R  +S Q    GLYP      S S+  PP  I  R    ETL+PN + +C R GE+    A R
Sbjct:   20 PQSLQLRQVQVLLRHGERTPVSARFKNAGLAAYWPYCQAANEMKSAVMSA-DSSWDTMAWRRRLEVFDRQLNPTSGSDSPALTQTSKGQVHSICQPGELTDRGRETTLALGERLRSLYVGQLGFLPSLLNAKSSSA------------------------VYLRATPIPRALESTQQAFRGLYPP----TSRSAELPPPVIVQRAIQDETLFPN-EGACKRFGELAKAFADR 221          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|1172590693|gb|OQO05862.1| (hypothetical protein B0A48_09957 [Rachicladosporium antarcticum])

HSP 1 Score: 71.2478 bits (173), Expect = 7.721e-10
Identity = 68/232 (29.31%), Postives = 97/232 (41.81%), Query Frame = 0
Query:   89 PSSFKLQQVVIIARHGDRAPIA---RNVGQA-----VQDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPY---------------AQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAELASR 297
            P S +L+QV ++ RHG+R P++   +N G A      Q + E ++  +S   SS +  AW     + D  L P    + P                 +LT +G +   ALG  LR  YV  L +LP+ L+A    A                        ++ RAT I R  +S Q    GLYP      S S+  PP  I  R    ETL+PN + +C R GE+    A R
Sbjct:   20 PQSLQLRQVQVLLRHGERTPVSARFKNAGLAAYWPYCQAANEMKSAVMSA-DSSWDTMAWRRRLEVFDRQLNPTSGSDSPALTQTSKGQVHSICQPGELTDRGRETTLALGERLRSLYVGQLGFLPSLLNAKSSSA------------------------VYLRATPIPRALESTQQAFRGLYPP----TSRSAELPPPVIVQRAIQDETLFPN-EGACKRFGELAKAFADR 221          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|698798928|ref|XP_009832493.1| (hypothetical protein H257_08356 [Aphanomyces astaci] >gi|574112664|gb|ETV78156.1| hypothetical protein H257_08356 [Aphanomyces astaci])

HSP 1 Score: 70.4774 bits (171), Expect = 1.050e-9
Identity = 54/169 (31.95%), Postives = 78/169 (46.15%), Query Frame = 0
Query:   89 PSSFKLQQVVIIARHGDRAPIARNVGQ-AVQDSPETQALWLSKLPSSQEVEAWTSAFPLA--DPSL----RPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPD 250
            PS   L+ V+++ RHGDR+PI   VGQ  V D+ E + LW SKLPS + +E  +    +   +P L     P D    P  QLT +G Q+++A G  LR  Y   L    A +H                              ++ R+TN+RRT +S   LL G +P+
Sbjct:   53 PSDLVLKHVLVLFRHGDRSPITTQVGQHLVMDAAEKE-LWASKLPSDEHIEKLSKGAKVTGMEPHLPPPKAPRDGGTFPNGQLTVRGLQQMEAKGEGLRAHYSDFL----ADIHEKD---------------------------VYIRSTNVRRTIRSCLALLHGCFPE 189          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|1087777723|ref|XP_018659716.1| (histidine acid phosphatase [Trichoderma gamsii] >gi|969881390|gb|KUE98596.1| histidine acid phosphatase [Trichoderma gamsii])

HSP 1 Score: 68.5514 bits (166), Expect = 5.368e-9
Identity = 74/248 (29.84%), Postives = 98/248 (39.52%), Query Frame = 0
Query:   89 PSSFKLQQVVIIARHGDRAPI------------------ARNVGQAV-------------QDSPETQALWLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHP--------YAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAELASR 297
            P    LQQV I+ RHG+R PI                   R++  AV               S  T+  W  +L +    +A   A P   P+      D H         +  LT +G +   ALG  LRK YV  L +LPAS+H +                          +FL+ RAT I R  +S Q   LGLYP   PH + +   PPL I  R  A ETL+PN D +C R   +    A+R
Sbjct:   20 PPRLHLQQVQILLRHGERTPINARFTNTGLPAYWPYCNAVRHLRSAVLAPSGPGADSGLGSGSSFTELQWRRRLETFGADDA---AIPATGPN------DSHKIETDGICDFGMLTDRGRETTYALGSRLRKLYVDHLDFLPASVHDA--------------------------NFLYLRATPIPRALESMQQAFLGLYP---PH-TRAPDFPPLTIISRSPADETLFPN-DGNCRRFAALSRAFANR 227          
BLAST of EWM22620.1 vs. NCBI_GenBank
Match: gi|589110691|ref|XP_006967368.1| (predicted protein [Trichoderma reesei QM6a] >gi|340516249|gb|EGR46498.1| predicted protein [Trichoderma reesei QM6a] >gi|572276965|gb|ETS00272.1| acid phosphatase [Trichoderma reesei RUT C-30])

HSP 1 Score: 68.5514 bits (166), Expect = 5.705e-9
Identity = 79/254 (31.10%), Postives = 106/254 (41.73%), Query Frame = 0
Query:   89 PSSFKLQQVVIIARHGDRAPIAR---NVGQAVQDSPETQAL----------WLSKLPSSQEVEAWTSAFPLADPSLRPVDYDEHPYAQLTRKGAQELQALGRHLRKRYVTDLKWLPASLHASGGHAPHASGGLSSAPSSSSPPSSSPPSFLHARATNIRRTQQSAQNLLLGLYPDGAPHPSPSSSAPPLAIQVRPTASETLYPNADRSCCRQGEIIAELASRHFDMPRAHVEDMTREAFARLG-LVPHPEPASA 328
            P S  LQQV I+ RHG+R P++    N G A    P   A+          W  +L S    +A   A P   P     +  +     LT +G +   ALG  LR+ YV  L +LPAS+  +                          SF++ RAT I R  +S Q   LGLYP   PH +     PPL +  R +  ETL+PN D  C R  ++    A R  +  R +  D  R   ARLG  +P   P  A
Sbjct:   20 PPSLHLQQVQILLRHGERTPVSARFANTGLAAY-WPYCSAVSRFRSAVLLQWRRRLESFGPNDA---AVPATGPDGSLDNLCD--LGMLTDRGRETTHALGVRLRRLYVDHLGFLPASIKDAS-------------------------SFMYLRATPIPRALESMQQAFLGLYP---PH-TRDPDFPPLTVVSRYSPEETLFPN-DMHCRRFAQLSRAFAQRAAE--RWNDSDEMRLLTARLGRFMPDDSPQVA 235          
The following BLAST results are available for this feature:
BLAST of EWM22620.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103185|gb|EWM22620.1|0.000e+0100.00histidine acid, partial [Nannochloropsis gaditana][more]
gi|553180255|ref|XP_005853373.1|3.731e-10099.32histidine acid, partial [Nannochloropsis gaditana ... [more]
gi|551664814|ref|XP_005835170.1|1.098e-1828.92histidine acid phosphatase [Guillardia theta CCMP2... [more]
gi|298710942|emb|CBJ32253.1|6.890e-1229.05conserved unknown protein [Ectocarpus siliculosus][more]
gi|695444332|ref|XP_009533945.1|3.938e-1028.63hypothetical protein PHYSODRAFT_563940 [Phytophtho... [more]
gi|1172609429|gb|OQO21586.1|6.682e-1029.31hypothetical protein B0A51_12072 [Rachicladosporiu... [more]
gi|1172590693|gb|OQO05862.1|7.721e-1029.31hypothetical protein B0A48_09957 [Rachicladosporiu... [more]
gi|698798928|ref|XP_009832493.1|1.050e-931.95hypothetical protein H257_08356 [Aphanomyces astac... [more]
gi|1087777723|ref|XP_018659716.1|5.368e-929.84histidine acid phosphatase [Trichoderma gamsii] >g... [more]
gi|589110691|ref|XP_006967368.1|5.705e-931.10predicted protein [Trichoderma reesei QM6a] >gi|34... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8075rna8075Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications