EWM29874.1, cds805 (CDS) Nannochloropsis gaditana

Overview
NameEWM29874.1
Unique Namecds805
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:462266..462547 +
Alignment locationCM002456.1:462682..463302 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29874.1
Productankyrin repeat protein
Orig transcript idgnl|cribi|Naga_100106g19.1448.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:462266..462547 +
CM002456.1supercontigCM002456.1:462682..463302 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|585112456|gb|EWM29874.1| (ankyrin repeat protein [Nannochloropsis gaditana])

HSP 1 Score: 621.698 bits (1602), Expect = 0.000e+0
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query:    1 MVTRENVLPAANVSYRKGKSAAHVWTKALAAAERNDITTLNKLWGMPEGKFITRNFQGENGHILHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDYLGMCTNDGQTWTNALPEDRKEMERCEVSLKAEIFRREVREIFWRERVRRQRTHDKSLWTDLEKWKSGNERTVLSEESRRTLRARGMQAEDRRRKDNPQVSNGLDVSWILVDMEDDEMFSKCLGFL 300
            MVTRENVLPAANVSYRKGKSAAHVWTKALAAAERNDITTLNKLWGMPEGKFITRNFQGENGHILHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDYLGMCTNDGQTWTNALPEDRKEMERCEVSLKAEIFRREVREIFWRERVRRQRTHDKSLWTDLEKWKSGNERTVLSEESRRTLRARGMQAEDRRRKDNPQVSNGLDVSWILVDMEDDEMFSKCLGFL
Sbjct:    1 MVTRENVLPAANVSYRKGKSAAHVWTKALAAAERNDITTLNKLWGMPEGKFITRNFQGENGHILHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDYLGMCTNDGQTWTNALPEDRKEMERCEVSLKAEIFRREVREIFWRERVRRQRTHDKSLWTDLEKWKSGNERTVLSEESRRTLRARGMQAEDRRRKDNPQVSNGLDVSWILVDMEDDEMFSKCLGFL 300          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|496363280|ref|WP_009072270.1| (ankyrin repeat-containing protein [Metallosphaera yellowstonensis] >gi|373526342|gb|EHP71122.1| ankyrin repeat-containing protein [Metallosphaera yellowstonensis MK1])

HSP 1 Score: 80.8777 bits (198), Expect = 9.727e-14
Identity = 51/122 (41.80%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   55 NFQGENGHI-LHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDY 175
            N + +NG   LH AA+    + V  LLE GAD NA D  G TPL   A           ++K L+E GA+PN ++ +G+TPL  A  RG VD VR     +LL+ GA+P + D  G  PLDY
Sbjct:   67 NAKDDNGRTPLHIAAQEGDVEIVKILLERGADPNAKDDNGRTPLHIAAQEGDVE-----IVKILLERGADPNAKNNYGWTPLHDAAYRGHVDVVR-----VLLERGADPWIADNGGHIPLDY 178          

HSP 2 Score: 65.0846 bits (157), Expect = 2.736e-8
Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 0
Query:   67 AAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPL 173
            AA+      V  LLE GAD NA D  G TPL + A +   +     ++K L+E GA+PN +D +G TPL  A   G V+ V+     +LL+ GA+P  +D  G+ PL
Sbjct:   14 AAENGDLIKVQTLLEKGADPNAKDDIGWTPLHFAAYLGHVN-----VVKILLERGADPNAKDDNGRTPLHIAAQEGDVEIVK-----ILLERGADPNAKDDNGRTPL 110          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|629736732|ref|XP_007826663.1| (Peptidase S8, subtilisin, Ser-active site protein [Metarhizium robertsii ARSEF 23] >gi|322702419|gb|EFY94070.1| Peptidase S8, subtilisin, Ser-active site protein [Metarhizium robertsii ARSEF 23] >gi|594711826|gb|EXU94848.1| ankyrin repeat protein [Metarhizium robertsii])

HSP 1 Score: 79.7221 bits (195), Expect = 6.034e-13
Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = 0
Query:   64 LHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDY 175
            LHYAA+  + +    LL++ AD    D+ G TPL + AT          +++ L+E+GANPN QD  G TP+ +A   G  D+V      +LLK GA+P V+DR G  PL Y
Sbjct:   73 LHYAAQNTRDEIAQILLDYWADPKITDKVGSTPLHYAAT-----HGNPEIIRLLLESGANPNAQDESGLTPIHYAAKHGEPDSVG-----LLLKKGADPKVKDRSGSTPLFY 174          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|906468892|gb|KNC29813.1| (hypothetical protein FF38_13405, partial [Lucilia cuprina])

HSP 1 Score: 79.7221 bits (195), Expect = 6.122e-13
Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 0
Query:   26 TKALAAAERNDITTLNKLWGMPEGKFITRNFQGENGHILHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDYL 176
            T  L AA+  D+ T+ ++          R+  G +   LH+AA   + + V +LLEHGA+V+A D+ G  PL    +   F      + K LI+AGAN N  D   +TPL  A  +G  D V+     +LLK GA+P  ++R+G  P D +
Sbjct:  421 THLLEAAKAGDLDTVRRIVLANPHSVNCRDLDGRHSTPLHFAAGFNRVQVVEFLLEHGAEVHAADKGGLVPLHNACSYGHFE-----VTKLLIKAGANVNVSDLWKFTPLHEAAAKGKYDIVK-----LLLKHGADPSKKNRDGATPADLV 561          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|123501942|ref|XP_001328182.1| (hypothetical protein [Trichomonas vaginalis G3] >gi|121911122|gb|EAY15959.1| conserved hypothetical protein [Trichomonas vaginalis G3])

HSP 1 Score: 79.337 bits (194), Expect = 7.951e-13
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   64 LHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPL 173
            LHYAA+  K  +V  L+ HGA++NA D+ G +PL + A     +R+   +++FLI  GA  N +D  GYTPL HAV+       R+   E+L++ G+     D++G  P+
Sbjct:  756 LHYAAQNNKKAAVEILISHGANINAKDKNGYSPLHYAA----INRQGKEMVEFLISNGARINSKDKDGYTPLHHAVMNN-----RKLTAELLIENGSYLNSHDKDGNTPM 856          

HSP 2 Score: 64.3142 bits (155), Expect = 7.899e-8
Identity = 47/143 (32.87%), Postives = 68/143 (47.55%), Query Frame = 0
Query:   38 TTLNK-LWGMPEGKFITRNFQGENGHILHYAAKRVKAKSVAWLLEHGADVNAVDRE-GETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDYLGM 178
            T+L+K  W   +    T  FQ    + LH AAK     S   LL  G +VN  D E G+TPL   A        +  +++ L++ GAN N +D    TPL +A         ++A VE+L+  GAN   +D+ G  PL Y  +
Sbjct:  662 TSLHKNAWNSKKTANTTPFFQTPQTNALHIAAKNNNVASAEDLLSKGFNVNEKDHESGKTPLHIAA-----ENNSSEVIEILLDIGANINAKDNSERTPLHYAAQNN-----KKAAVEILISHGANINAKDKNGYSPLHYAAI 794          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|557078424|gb|ESQ24257.1| (Ankyrin repeat [uncultured Acidilobus sp. JCHS])

HSP 1 Score: 76.6406 bits (187), Expect = 8.906e-13
Identity = 57/131 (43.51%), Postives = 72/131 (54.96%), Query Frame = 0
Query:   55 NFQGENGHI-LHYAAKRVKAKSVAWLL-EHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDYLGMCTNDG 183
            N + +NG   LH AA R  A+ VAWLL E+GAD NA DREG TPL W A      R    ++K L+  GA+ N +D HG TPL  A  RG  + V      +LL+ GA+P  RD  G  PLD      ++G
Sbjct:   96 NARDDNGFTPLHRAADRGHAE-VAWLLIENGADPNARDREGRTPLHWAA-----DRGHAEVVKVLLREGADVNARDDHGVTPLHWAAERGHAEVVL-----LLLQRGADPNARDNCGLTPLDRAAAGGHEG 215          

HSP 2 Score: 65.0846 bits (157), Expect = 9.704e-9
Identity = 45/109 (41.28%), Postives = 58/109 (53.21%), Query Frame = 0
Query:   64 LHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQP 172
            LH+AA R  A+ V  LL  GADVNA D  G TPL W A      R    ++  L++ GA+PN +D  G TPL  A   G    VR     MLL+ GA+P  + + G +P
Sbjct:  139 LHWAADRGHAEVVKVLLREGADVNARDDHGVTPLHWAA-----ERGHAEVVLLLLQRGADPNARDNCGLTPLDRAAAGGHEGVVR-----MLLEAGASPRRQGQLGLEP 237          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|408536130|pdb|4HB5|A (Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. >gi|408536131|pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267.)

HSP 1 Score: 73.9442 bits (180), Expect = 2.043e-12
Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 0
Query:   64 LHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLD 174
            LHYAA+    + V  LL  GAD NA D +G TPL + A           ++K L+  GA+PN +D+ G TPL +A   G      +  V++LL  GA+P   D +G+ PLD
Sbjct:   41 LHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKE-----IVKLLLSKGADPNAKDSDGRTPLHYAAENG-----HKEIVKLLLSKGADPNTSDSDGRTPLD 141          

HSP 2 Score: 69.707 bits (169), Expect = 8.336e-11
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 0
Query:   67 AAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDY 175
            AA+      V  LLE+GAD NA D +G TPL + A           ++K L+  GA+PN +D+ G TPL +A   G      +  V++LL  GA+P  +D +G+ PL Y
Sbjct:   11 AAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKE-----IVKLLLSKGADPNAKDSDGRTPLHYAAENG-----HKEIVKLLLSKGADPNAKDSDGRTPLHY 109          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|1177806044|pdb|5HRY|A (Chain A, Computationally Designed Cyclic Dimer Ank3c2_1 >gi|1177806045|pdb|5HRY|B Chain B, Computationally Designed Cyclic Dimer Ank3c2_1 >gi|1177806046|pdb|5HRY|C Chain C, Computationally Designed Cyclic Dimer Ank3c2_1 >gi|1177806047|pdb|5HRY|D Chain D, Computationally Designed Cyclic Dimer Ank3c2_1 >gi|1177806048|pdb|5HRY|E Chain E, Computationally Designed Cyclic Dimer Ank3c2_1 >gi|1177806049|pdb|5HRY|F Chain F, Computationally Designed Cyclic Dimer Ank3c2_1 >gi|1177806050|pdb|5HRY|G Chain G, Computationally Designed Cyclic Dimer Ank3c2_1 >gi|1177806051|pdb|5HRY|H Chain H, Computationally Designed Cyclic Dimer Ank3c2_1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.056e-12
Identity = 45/112 (40.18%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   64 LHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDY 175
            LH AA+   AK V  LLE GAD NA D +G+TPL   A          V++  L+  GA+PN +D+ G TPL  A   G         V +LL +GA+P   D +G+ PLD 
Sbjct:   41 LHLAAENGHAKVVLLLLEQGADPNAKDSDGKTPLHLAA-----ENGHAVVVALLLMHGADPNAKDSDGKTPLHLAAENG-----HEEVVILLLAMGADPNTSDSDGRTPLDL 142          

HSP 2 Score: 65.855 bits (159), Expect = 1.961e-9
Identity = 44/107 (41.12%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   67 AAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPL 173
            AA+      V  LLE+GADVNA D +G+TPL   A     +    V+L  L+E GA+PN +D+ G TPL  A   G         V +LL  GA+P  +D +GK PL
Sbjct:   11 AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAE----NGHAKVVL-LLLEQGADPNAKDSDGKTPLHLAAENG-----HAVVVALLLMHGADPNAKDSDGKTPL 107          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|907635698|ref|XP_013099605.1| (PREDICTED: tankyrase [Stomoxys calcitrans])

HSP 1 Score: 77.0258 bits (188), Expect = 5.410e-12
Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 0
Query:   26 TKALAAAERNDITTLNKLWGMPEGKFITRNFQGENGHILHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLDYL 176
            T  L AA+  D+ T+ ++          R+  G +   LH+AA   + + V +LLE GA+V+A D+ G  PL    +   F      + K LI+AGAN N  D   +TPL  A  +G  D V+     +LLK GA+P  ++R+G  P D +
Sbjct:  483 THLLEAAKAGDLDTVRRIVLANPHSVNCRDLDGRHSTPLHFAAGFNRVQVVEFLLEQGAEVHAADKGGLVPLHNACSYGHFE-----VTKLLIKAGANVNVSDLWKFTPLHEAAAKGKYDIVK-----LLLKHGADPTKKNRDGATPADLV 623          

HSP 2 Score: 63.929 bits (154), Expect = 1.273e-7
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 0
Query:   31 AAERNDITTLNKLWGMPEGKFITRNFQGENGHILHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPLD 174
            A +  DI  + KL  +       R+  G     LH+AA   + + V +LL +GA + A D  G  PL    +          +++ L++AGA PN  D   YTPL  A  +G VD         LL+ GANP +R+ E K PL+
Sbjct:   27 ACKTGDIAKVKKL--ITTQTVNARDTAGRKSTPLHFAAGYGRREVVEFLLNNGASIQACDEGGLHPLHNACSFG-----HAEVVRLLLKAGACPNTTDNWNYTPLHEAASKGKVDVCI-----ALLQHGANPNIRNSENKTPLE 158          
BLAST of EWM29874.1 vs. NCBI_GenBank
Match: gi|1183359400|gb|ORX86823.1| (ankyrin, partial [Anaeromyces robustus])

HSP 1 Score: 71.2478 bits (173), Expect = 5.932e-12
Identity = 44/110 (40.00%), Postives = 58/110 (52.73%), Query Frame = 0
Query:   64 LHYAAKRVKAKSVAWLLEHGADVNAVDREGETPLCWCATIAPFSRRTGVLLKFLIEAGANPNHQDTHGYTPLTHAVVRGAVDAVRRARVEMLLKLGANPCVRDREGKQPL 173
            L YA +      V +L+EHGA++N VD  GETPL      A F  +  + +K L+E GA+ N +D HG TPL +A   G         V+ LL+ GAN    D  GK PL
Sbjct:    9 LFYACESGNESIVNYLVEHGANINKVDEYGETPLLK----ACFKNKENI-MKCLVELGADINKEDHHGKTPLFYACQNG-----NETIVKYLLEHGANVNKEDENGKTPL 108          
The following BLAST results are available for this feature:
BLAST of EWM29874.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112456|gb|EWM29874.1|0.000e+0100.00ankyrin repeat protein [Nannochloropsis gaditana][more]
gi|496363280|ref|WP_009072270.1|9.727e-1441.80ankyrin repeat-containing protein [Metallosphaera ... [more]
gi|629736732|ref|XP_007826663.1|6.034e-1340.18Peptidase S8, subtilisin, Ser-active site protein ... [more]
gi|906468892|gb|KNC29813.1|6.122e-1334.44hypothetical protein FF38_13405, partial [Lucilia ... [more]
gi|123501942|ref|XP_001328182.1|7.951e-1337.27hypothetical protein [Trichomonas vaginalis G3] >g... [more]
gi|557078424|gb|ESQ24257.1|8.906e-1343.51Ankyrin repeat [uncultured Acidilobus sp. JCHS][more]
gi|408536130|pdb|4HB5|A2.043e-1238.74Chain A, Crystal Structure Of Engineered Protein. ... [more]
gi|1177806044|pdb|5HRY|A4.056e-1240.18Chain A, Computationally Designed Cyclic Dimer Ank... [more]
gi|907635698|ref|XP_013099605.1|5.410e-1233.77PREDICTED: tankyrase [Stomoxys calcitrans][more]
gi|1183359400|gb|ORX86823.1|5.932e-1240.00ankyrin, partial [Anaeromyces robustus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna805rna805Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications