EWM22650.1, cds8041 (CDS) Nannochloropsis gaditana

Overview
NameEWM22650.1
Unique Namecds8041
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:475311..475364 +
Alignment locationKK037247.1:475766..477871 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22650.1
Productconserved oligomeric golgi complex subunit 6
Orig transcript idgnl|cribi|Naga_100023g52.3966.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:475311..475364 +
KK037247.1supercontigKK037247.1:475766..477871 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006891intra-Golgi vesicle-mediated transport
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO:0016020membrane
GO:0017119Golgi transport complex
Vocabulary: INTERPRO
TermDefinition
IPR010490COG6
Homology
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|585103215|gb|EWM22650.1| (conserved oligomeric golgi complex subunit 6 [Nannochloropsis gaditana])

HSP 1 Score: 1462.97 bits (3786), Expect = 0.000e+0
Identity = 719/719 (100.00%), Postives = 719/719 (100.00%), Query Frame = 0
Query:    1 MMNGSKLKFKKIRLLEGFRVLKQKVRKMVECRTDTPAMLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLLEPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEKLREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGLFTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILLDCDD 719
            MMNGSKLKFKKIRLLEGFRVLKQKVRKMVECRTDTPAMLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLLEPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEKLREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGLFTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILLDCDD
Sbjct:    1 MMNGSKLKFKKIRLLEGFRVLKQKVRKMVECRTDTPAMLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLLEPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEKLREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGLFTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILLDCDD 719          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|1042301253|ref|XP_017346924.1| (PREDICTED: conserved oligomeric Golgi complex subunit 6 [Ictalurus punctatus])

HSP 1 Score: 268.085 bits (684), Expect = 2.326e-76
Identity = 205/709 (28.91%), Postives = 344/709 (48.52%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDV--ALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEK----LREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILL 715
            L +K+ K++E R D    MLEAL++++ F+ +    N+   R++LR D+E++++ + ++F+R+F+ +KE L ++      +   C  +  R++ A+E     + KT  LQ +    E +A   Q FL  F LS  E+A LRY     +  D    FF AL R + I  +   L+ +++Q  G E++E+++  QET++ +L+ +    C GL +       E  DV   L   +  ++DRP L+ +  +     R+  V R F+ AL+                 R   G   RPI+MHSHDP+RY+ D+LAWLHQ+ ASE+E L  L +      + GQG                  +ED  QE+     +G I EGV   LK RI Q++  EP                   LL++L +LL FY  T   +  T+  S L  ++ E  V  ++ F   L    S+ +  V   P DL P   + +    L E++A H++S++P         +VL+ +++P L+ C   A  LG +D+A YM+N+  ++  +L         A+  + +K    L  ++E  L  ++  ++  VL R GLG + +  Q  S +  G LS  A +D  S+  TM  F R L     F +PQF  L   AL+ +  +Q++ ++ + + + +       +GY + E  L  +P+QV+ LL
Sbjct:   30 LSRKLNKILETRLDNDKEMLEALKSLSVFFTE----NSLRTRRNLRGDIERRSLSINEEFVRIFKDVKEELESIHEDVQAMSSCCEEMTNRLKAAKEQTQDLILKTNKLQGENHSLEVRAQVAQAFLSKFQLSSEEMATLRYARDGPITED----FFKALNRVKNIHEDVKVLLRTNQQTAGLEIMEQMAVIQETSYEQLYRWAQNECRGLTQ-------ETCDVPPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALT-----------------RGGPGGTPRPIEMHSHDPMRYVGDMLAWLHQSTASEKEHLEALLK-----QTTGQG------------------VEDSMQEI-----VGHITEGVCRPLKVRIEQVIVAEPG----------------AVLLYKLSNLLKFYHHTISGIIGTSVVSLL-ITIEEMHVLSKKMFFNSLSLHASRLMDKVELPPPDLGPTASLTQTLSLLREVLASHDSSVLPLDTRQADFAQVLSCILDPLLQLCTVSASNLGTADMATYMVNSLYMMKTTL---------ALFEFTDKRLEMLEFQIEAHLDTLINEQASYVLTRAGLGYVYNCVQQHS-TEQGPLSNLANMDGSSLKATMVQFDRYLSSPDTFVMPQFNFLLSAALKEQIFKQSTELVCRAYGEVYTAVTNPANGYREPENALHRSPQQVQTLL 651          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|597749690|ref|XP_007236774.1| (PREDICTED: conserved oligomeric Golgi complex subunit 6 [Astyanax mexicanus])

HSP 1 Score: 267.314 bits (682), Expect = 5.268e-76
Identity = 204/709 (28.77%), Postives = 344/709 (48.52%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDV--ALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEK----LREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILL 715
            L +K+ K++E R D    MLEAL++++ F+ +    N+   R++LR D+EK+++ + ++F+R+F+ +KE L +++     +   C  + +R++ A+E     + KT  LQ +    E ++   Q FL  F LS  E++ LR      +  D    FF AL+R + I  +   L+ +++Q  G E++E+++  QET++ +L+ +    C GL +       E  DV   L   +  ++DRP LF +  +     R+  V R F+ AL+                 R   G   RPI+MHSHDP+RY+ D+LAWLHQA ASE+E L  L +     G                       +ED  QE+     +G I EGV   LK RI Q++  EP                   LL++L +LL FY  T   +  T+  S L  ++ E  V  ++ F   L    S+ +  V   P DL P   + +    L E++A H++S++P  A      +VL+ +++P L+ C   A  LG +D+A YM+N+  ++  +L         A+  + +K    L  ++E  L  ++  ++  VL R GLG + +  Q  SA   G LS    +DS S+   M  F R L     F +PQ   L   A++ +  +Q++ ++ + + + +A      SGY + E+ L  +P+QV+ LL
Sbjct:   31 LTRKLNKILETRLDNDKEMLEALKSLSVFFTE----NSLRTRRNLRGDIEKRSLSINEEFVRIFKGVKEELESINEDVQAMSSCCEEMTSRLKAAKEQTQDLILKTNKLQGENHRLEVRSQVAQVFLSKFQLSSEEMSILRCARHGPITED----FFKALSRVKNIHEDVKVLLRTNQQTAGLEIMEQMAVLQETSYEQLYRWAQSECRGLTQ-------ETCDVPPVLSQAMEALQDRPVLFKYTLDEFGTARRSAVVRGFIDALT-----------------RGGPGGTPRPIEMHSHDPMRYVGDMLAWLHQATASEKEHLEALLKQVTVQG-----------------------VEDSMQEI-----VGHITEGVCRPLKVRIEQVIVAEPG----------------AVLLYKLSNLLKFYHHTISGIIGTSVVSLL-ITIEEMHVLSKKMFFNSLSVHASRLMDKVELPPPDLGPTASLNQTLSLLREVLASHDSSVLPLDARQADFAQVLSCILDPLLQLCTVSASNLGTADMATYMVNSLYMMKTTL---------ALFEFTDKRLEMLEFQIEAHLDTLINEQASYVLTRAGLGYIYNCVQQHSA-EQGPLSNLPSMDSSSLKAAMVQFDRYLSSPDAFVMPQLNFLLSAAIKEQIFKQSTELVCRAYGEMYAAVTNPSSGYKEPESVLHRSPQQVQTLL 652          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|1129987002|ref|XP_019750243.1| (PREDICTED: conserved oligomeric Golgi complex subunit 6 [Hippocampus comes])

HSP 1 Score: 265.003 bits (676), Expect = 3.710e-75
Identity = 203/703 (28.88%), Postives = 335/703 (47.65%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEKLREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILL 715
            L +K+ K++E R D    MLEAL A++ F+ +    N+   R++LR D+E++++ + +DF R+F+ +KE L ++      +   C  + +R++ A+E     + KT  LQ +    E +A   Q FL  F LS  E++ LR      +  D    FF AL+R ++I  +   L+ +++Q  G E++E+++  QE A+ +L+ +    C GL      +E+ +    L   +  ++DRP L+ +  +     R+  V R F+ AL+                 R   G   RPI+MHSHDP+RYL D+LAWLHQA ASERE L  L +                          S TL+D    + +  ++G I EGV   LK RI Q++  EP                   LL++L +LL FY  T   +  T  A+AL  ++ E  +  ++ F   L    S+ +  V   P DL P   + +    L E++A H++S+VP GA      +VL+ +++P L+ C   A  LG +D+A YM+N+  ++  +L              +E L  ++E  L  ++  ++  VL R GL  + +  Q   A   G LS   G+D  SV   M  F R L       +PQ   L   A++ +   Q++ ++ + + + HA      + Y D E  L  +P+QV+ LL
Sbjct:   32 LSRKLNKILETRLDNDKEMLEALTALSEFFTE----NSLRTRRNLRGDIERRSLAINEDFARIFKEVKEELESVHEDVQAMSTCCAEMTSRLKAAKEQTQDLIVKTNKLQGENRRLEVRAQVAQAFLAKFQLSSEEMSTLRGARDAPISED----FFKALSRVKQIHEDVKILLRTNQQTAGLEIMEQMAVLQEAAYEQLYRWAQNECRGL-----TQEMCDISPILTQAMEALQDRPVLYKYTLDEFGTARRSAVVRGFIDALT-----------------RGGPGGTPRPIEMHSHDPMRYLGDMLAWLHQATASEREHLEALLK--------------------------SVTLQDVEDNMQE--VVGHITEGVCRPLKVRIEQVIVAEPG----------------AVLLYKLSNLLKFYHHTISSIVGTG-AAALLMTIEEMHMLSKKMFFNSLSLHASRLMDKVELPPPDLGPTTSLTQTLALLREVLASHDSSVVPVGARQADFAQVLSCILDPLLQLCTVSASNLGTADMATYMVNSLYVMKTTLALFE-----FTDKRLEMLEFQIEAHLDTLINEQASYVLTRAGLSYIYNCVQQHDA-KQGPLSLVPGMDVSSVKAAMVQFDRYLSSPDSLAMPQLNFLLSAAIKEQIFSQSTELVCRAYGEVHAALNSPANAYKDPERLLPRSPQQVRALL 653          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|1188093833|ref|XP_020793358.1| (conserved oligomeric Golgi complex subunit 6, partial [Boleophthalmus pectinirostris])

HSP 1 Score: 264.233 bits (674), Expect = 7.149e-75
Identity = 202/706 (28.61%), Postives = 340/706 (48.16%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEK----LREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKIL 714
            L +K+ K++E R D    MLEAL+A++ F+ +    N+   R++LR D+E++++ + +DF R+F+ +KE L +++     +   C  + +R++ A+E     + KT  LQ +    E +A   Q FL  F L+  E+A LR      +  D    FF AL R ++I  +   L+ +++Q  G E++E+++  QET++ +L+ +    C GL     QE  + + V L   +  ++DRP L+ +  +     R+  V R F+ AL+                 R   G   RPI+MHSHDP+RY+ D+LAWLHQA ASE+E L  L +     G                       +E++ QE+     +G I EGV   LK RI Q++  EP                   LL++L +LL FY  T   +  T+ AS L  +M E  +  ++ F   L    S+ +  V   P DL P   + +    L E++A H++S+VP  A      +VL+ +++P L+ C   A  LG +D+A YM+N+  ++  +L         A+  + +K    L  ++E  L  ++  ++  VL R GL  + +  Q  S    G LS    +D+ SV   M  F R L       +PQ   L   A++ +  +Q++ ++ + + + +A      +GY D E  +  +P QVK L
Sbjct:   29 LSRKLNKILETRLDNDKEMLEALKALSVFFTE----NSLRTRRNLRGDIERRSLAINEDFARVFKEVKEELESVNEDVQAMSSCCEEMTSRLKAAKEQTQDLIVKTNKLQGENHRLEVRAQVAQAFLTKFQLTSEEMAILRGARDTPITED----FFKALHRVKQIHEDVKVLLRTNQQTAGLEIMEQMAVLQETSYEQLYRWAQNECRGLT----QEACDISPV-LTQAMEALQDRPVLYKYTLDEFGTARRSAVVRGFIDALT-----------------RGGPGGTPRPIEMHSHDPMRYVGDMLAWLHQATASEKEHLEALLKQVTIAG-----------------------VEENMQEV-----VGHITEGVCRPLKVRIEQVIVAEPG----------------AVLLYKLSNLLKFYHHTISSIIGTSVASLL-MTMDEMHILSKKMFFNSLSLHASRLMDKVELPPADLGPTASLTQTLSLLREVLASHDSSVVPLDARQADFAQVLSCILDPLLQLCTVSASNLGTADMATYMVNSLYVMKTTL---------ALFEFTDKRLEMLEFQIEAHLDTLINEQASYVLTRAGLSYIYNCVQQHSP-EQGPLSLLPSMDNSSVKAAMVQFDRYLSSPDTLVMPQLNFLLSAAIKEQIFRQSTELVCRAYAEVYAALTSPANGYKDAENLVPRSPPQVKTL 649          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|1168917992|ref|XP_020501979.1| (conserved oligomeric Golgi complex subunit 6 [Labrus bergylta])

HSP 1 Score: 262.692 bits (670), Expect = 2.466e-74
Identity = 204/707 (28.85%), Postives = 341/707 (48.23%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEK----LREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILL 715
            L +K+ K++E R D    MLEAL+A++ F+ +    N+   R++LR D+E++++ + ++F R+F+ +KE L +++     +   C  + + ++ A+E     + KT  LQ +    E +A   Q FLD F LS  E+A LR      +  D    FF AL R + I  +   L+ +++Q  G E++E+++  QET++ +L+ +    C GL     QE  + + V L   +  ++DRP L+ +  +     R+  V R F+ AL+                 R   G   RPI+MHSHDP+RY+ D+LAWLHQA ASE+E L  L              + +  +GV  + Q+               ++G I EGV   LK RI Q++  EP                   LL++L +LL FY  T   +  T+ AS L  +M E  V  ++ F   L    S+ +  V   P DL P   + +    L E++A H++S+VP  A      +VL+ +++P L+ C   A  LG +D+A YM+N+  ++  +L         A+  + +K    L  ++E  L  ++  ++  VL R GL  +    Q  SA   G LS    +DS SV   M  F R L     F +PQ   L   A++ +  +Q++ ++ + + + +A      + Y D E  +  +P+QV+ LL
Sbjct:   29 LSRKLNKILETRLDNDKEMLEALKALSVFFTE----NSLRTRRNLRGDIERRSLGINEEFARIFKEVKEELESVNEDVQAMSTCCEEMTSTLKAAKEQTQDLIVKTNKLQGENHRLEVRAQVAQAFLDKFQLSTEEMAILRGARDASITED----FFKALGRVKHIHEDVKILLRTNQQTAGLEIMEQMAVLQETSYEQLYRWAQNECRGL----TQESCDISPV-LTQAMEALQDRPVLYKYTLDEFGTTRRCAVVRGFIDALA-----------------RGGPGGTPRPIEMHSHDPMRYVGDMLAWLHQATASEKEHLEALL-------------KQVTLQGVEENMQD---------------VVGHITEGVCRPLKVRIEQVIVAEPG----------------AVLLYKLSNLLKFYHHTISSIIGTSVASLL-ITMEEMHVLSKKMFFNSLSLHASRLMDKVELPPADLGPTASLTQTLSLLREVLASHDSSVVPLDARQADFAQVLSCILDPLLQLCTVSASNLGTADMATYMVNSLYVMKTTL---------ALFEFTDKRLEMLEFQIEAHLDTLINEQASYVLTRAGLSYIYSCVQQHSA-EQGPLSLLPSMDSSSVKAAMVQFDRYLSSPDTFVMPQLNFLLSAAIKEQIFRQSTELVCRAYSEVYAALTSPANNYKDPENLVPRSPQQVQTLL 650          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|589929669|ref|XP_006977647.1| (PREDICTED: conserved oligomeric Golgi complex subunit 6 isoform X3 [Peromyscus maniculatus bairdii])

HSP 1 Score: 261.151 bits (666), Expect = 1.016e-73
Identity = 198/704 (28.12%), Postives = 340/704 (48.30%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASA-LGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEKLREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILL 715
            L +K+ K++E R D    MLEAL+A++ F+ +    N+   R++LR D+E++++ + ++F+ +F+ +KE L +++     +   C  + +R++ A+E     + KT  LQ +    E +A     FL  F L+  E+A LR      V  D    FF AL R ++I  +   L+ +++Q  G E++E+++  QETA+ RL+ +    C  L     QE  + + V L   +  ++DRP L+ +  +     R+  V R F+ AL+                 R   G   RPI+MHSHDP+RY+ D+LAWLHQA ASE+E L  L              + +  +GV  + QE               ++G I EGV   LK RI Q++  EP                   LL+++ +LL FY  T    G+  +++A L  ++ E  +  ++ F   L    S+ +  V   P DL P+  + +    L E++A H++S+VP  A      +VL+ +++P L+ C   A  LG +D+A +M+N+  ++  +L              +E L+ ++E  L  ++  ++  VL R GL  + +  Q       G L++   LDS ++   M  F R L       +PQ   L    ++ +  +Q++ ++ + +E+ HA      + Y D E+ L  TPEQVK LL
Sbjct:   35 LSRKLHKILETRLDNDKEMLEALKALSTFFVE----NSLRTRRNLRGDIERRSLAINEEFVNIFKEVKEELESINEDVQAMSSCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQRLEIRAQVADAFLSKFQLTSEEMALLRGTRGGPVTED----FFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRALT----QESCDVSAV-LTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALT-----------------RGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALL-------------KHVTAQGVEENIQE---------------VVGHITEGVCRPLKVRIEQVILAEPG----------------AVLLYKISNLLKFYHHTVS--GIVGNSAATLLTTIEEMHLLSKKIFFNSLSLHASKLMDKVELPPPDLGPSSALNQTLTLLREVLASHDSSVVPLDARQADFVQVLSCVLDPLLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFE-----FTDRRLEMLQFQIEAHLDTLINEQASYVLTRVGLSYIYNTVQQ-HKPEQGALASLPSLDSVALKAAMAQFDRYLSAPDHLLMPQLNFLLSATVKEQIVKQSTELVCRAYEEVHAAVMNPVNAYKDPESILHRTPEQVKTLL 656          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|919047363|ref|XP_013406875.1| (PREDICTED: conserved oligomeric Golgi complex subunit 6-like [Lingula anatina])

HSP 1 Score: 261.151 bits (666), Expect = 1.297e-73
Identity = 197/720 (27.36%), Postives = 343/720 (47.64%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVA--LGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNL---------------FRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEKLREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILL 715
            L +K+ K+++ R D    MLEAL+A+++F+ +    NT   R++LR D+E++++ + +DF++ F+ +KE+L ++      + + C  +  R++ A+E     + +T  LQ +    + +A     FL  F L   E+  LR      + PD    FF ALAR ++I  +C  L+ +++Q  G E++E ++ HQE+A+ RL+ +    C  L  + P       D++  L LGL  ++DRP LF +  +     R+  + R F+ AL+                 R   G   RPI++HSHDP+RY+ D+LAWLHQA ASE+E L  L               +R +    SG  G   +    +  D    GT++D         +LG I EGV    K R+ Q++  EP                   LL++L +LL FY+ T  +L L+ DAS LG ++ E  V   + F   L    ++ L  V   P +L P   + +  Q L ++++ H++S+V          ++++++I+P ++ C   A  L   D+A YMIN    + ++L              +E L+ +++  +  ++  ++  +L R GL       Q       G LS+  G++  ++   +  F   L     + L Q   LQ   +R   R+++  +I   +E+ +      ++GY D +  +  TPEQVK LL
Sbjct:   22 LSRKLNKILDTRLDNDKEMLEALKALSSFFSE----NTLRNRRNLRGDVERRSLAINEDFIQAFQQVKEQLDSVYEDVKGMSECCQDMTTRLKAAKEQTHDLINQTTQLQTESQRLQMRAQVADAFLAKFQLKPEEVKILRGTRDGALHPD----FFKALARVKQIHTDCKVLLRTNQQTAGLEIMESMALHQESAYERLYRWTQNECRALSNESP-------DISSQLCLGLEALQDRPVLFRYSLDEFGTARRTAIVRGFIDALT-----------------RGGPGGTPRPIELHSHDPLRYVGDMLAWLHQATASEKEHLQTLLKKCNNCWKILYGPMYRKKTGIYSGLYGYELIEEAVMKADEANEGTIQD---------ILGHITEGVCRPFKVRVEQVVVAEPGP----------------VLLYKLTNLLKFYEHTIGQL-LSKDASLLG-TLDEAHVLSSKMFFNSLNIHAARLLDKVELPPAELGPTGPLNQTLQLLKDVLSSHDSSVVSIDDRQKDFSKIMSSVIDPLIQMCSLSASKLTTVDMATYMINCLYTMQSALALFE-----YTDQRLEMLQAQIDAHIDTLISEQASHILHRVGLASTYGIVQQ-HQPKQGPLSSIPGMEPGTLKGAIAKFDSFLSTPDGYILQQCSLLQSTTVRETTRKRSMELIVSAYEELYTAITAPQNGYKDPQNLMPRTPEQVKHLL 676          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|1083273863|ref|XP_018620000.1| (PREDICTED: conserved oligomeric Golgi complex subunit 6 [Scleropages formosus])

HSP 1 Score: 260.381 bits (664), Expect = 1.785e-73
Identity = 210/709 (29.62%), Postives = 344/709 (48.52%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDG--HRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEK----LREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILL 715
            L +K+ K++E R D    MLEAL+A++ F+ +    NT   R++LR D+E++++ + + F+++F+ +KE L +++     +   C  +  R++ A+E     + KT  LQ +    E +A   Q FL  F LS  E+A LR      V  DG     FF AL R ++I  +   L+ +++Q  G E++E+++  QET++ +L+ +    C GL     QE  +   V L   +  ++DRP L+ +  +     R+  V R F+ AL+                 R   G   RPI+MHSHDP+RY+ D+LAWLHQA ASE+E L  L +           +  LPG            +E++ QE+     +G I EGV   LK RI Q++  EP                   LL++L +L+ FY  T   +  T  AS L  +M E  V  ++ F   L    S+ L  V   P DL P   + +    L E++A H++S+VP  A      +VL+ +++P L+ C   A  LG +D+A YM+N+  ++  +L         A+  + +K    L  ++E  L  ++  ++  VL R GL  + + AQ  SA   G LS   G+DS S+   M  F R L       +PQ   L    ++ +  +Q++ ++ + + + +A      + Y + ET L  TP QV+ LL
Sbjct:   31 LSRKLNKILETRLDNDKEMLEALKALSVFFTE----NTLRTRRNLRGDVERRSLSINEHFVQVFKEVKEELESVNEDVQAMSACCQEMTNRLKAAKEQTQDLIVKTNKLQGENHRLEVRAQVAQVFLSKFQLSSKEMAILR------VARDGPVTEEFFNALRRVKQIHEDVKILLRTNQQTAGLEIMEQMAVLQETSYEQLYRWAQNECRGLT----QETCDITPV-LSQAMEALQDRPVLYKYTLDEFGTARRCAVVRGFIDALT-----------------RGGPGGTPRPIEMHSHDPLRYVGDMLAWLHQATASEKEHLEALLK-----------QVTLPG------------VEENMQEI-----VGHITEGVCRPLKVRIEQVIVAEPG----------------AVLLYKLSNLIKFYHHTISGIIGTGAASLL-VTMEEMHVLSKKMFFNSLSLHASRLLDKVELPPPDLGPTSSLTQTLSLLREVLASHDSSVVPLDARQADFAQVLSCILDPLLQLCTVSASNLGTADMATYMVNSLYMMKTTL---------ALFEFTDKRLEMLEFQIEAHLDTLINEQASYVLTRAGLSYIYNCAQQHSA-EQGPLSNVPGMDSSSLKAAMVQFDRYLSSPDTLVMPQLNFLLSATIKEQIFRQSTDLVRRAYGEVYAAVMDVANEYKEPETVLHRTPLQVQTLL 652          
BLAST of EWM22650.1 vs. NCBI_GenBank
Match: gi|831308239|ref|XP_012686419.1| (PREDICTED: conserved oligomeric Golgi complex subunit 6 [Clupea harengus])

HSP 1 Score: 259.61 bits (662), Expect = 3.044e-73
Identity = 204/707 (28.85%), Postives = 340/707 (48.09%), Query Frame = 0
Query:   21 LKQKVRKMVECRTDTPA-MLEALQAIAAFYGQREGGNTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVALGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPGGSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLL--EPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKLGLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEK----LREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGL-----FTLPQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILL 715
            L +K+ K++E R D    MLEAL+A++ F+ +    N+   R++LR D+E++++ + ++F+R+F+ +KE L ++      +   C  +  R++ A+E     + KT  LQ +    E +A   Q FL  F LS  E+A LR      V  D    FF AL R ++I  +   L+ +++Q  G E++E+++  QE ++ +L+ +    C GL     QE  +   V L   +  ++DRP L+ +  +     R+  V R F+ AL+                 R  SG   RPI+MHSHDP+RY+ D+LAWLHQA ASE+E +  L              + +  +GV  + QE               ++G I EGV   LK RI Q++  EP                   LL++L +LL FY  T   +  T+ A AL  +M E  +  ++ F   L    S+ +  V   P DL P   + +    L E++A H++S+VP  A      +VL+ +++P L+ C   A  LG +D+A YM+N   ++  SL         A+  + +K    L  ++E  L  ++  ++  VL R GL  L    Q  S    G L+    +DS SV  +M  F R L       +PQ   L   A++ +  +Q++ ++ + + + H+      +GY + E+ L  +P+QV+ LL
Sbjct:   29 LSRKLNKILETRLDNDKEMLEALKALSVFFTE----NSLRTRRNLRGDIERRSLSINEEFVRIFKDVKEELESVHEDVHAMSTCCDEMTNRLKAAKEQTQDLIVKTNALQGENHRLEVRAHVAQAFLGKFQLSSEEMATLRTARDGPVTED----FFKALNRVKQIHEDVKVLLRTNQQTAGLEIMEQMAVLQEASYEQLYRWAQNECRGL----TQETCDITPV-LSQAMEALQDRPVLYKYTLDEFGTARRSAVVRGFIDALT-----------------RGGSGGTPRPIEMHSHDPMRYVGDMLAWLHQATASEKEHMEALL-------------KQVTIQGVEENMQE---------------VVGHITEGVCRPLKMRIEQVIVAEPGS----------------VLLYKLSNLLKFYHHTISVIVGTSVA-ALLMTMEEMHILSKKMFFNSLSLHASRLMDKVELPPPDLGPTSSLTQTLSLLREVLASHDSSVVPLDARQADFAQVLSCILDPLLQLCTVSASNLGTADMATYMVNCLYMMKTSL---------ALFEFTDKRLEMLEFQIEAHLDTLINEQASYVLTRAGLSYLYSTLQQHSP-EQGPLANLPSMDSSSVKGSMVQFDRYLSSPDTLMMPQLNFLLSAAIKEQIFRQSTELVCRAYVEVHSAVTNPANGYKEPESLLLRSPQQVQSLL 650          
The following BLAST results are available for this feature:
BLAST of EWM22650.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103215|gb|EWM22650.1|0.000e+0100.00conserved oligomeric golgi complex subunit 6 [Nann... [more]
gi|1042301253|ref|XP_017346924.1|2.326e-7628.91PREDICTED: conserved oligomeric Golgi complex subu... [more]
gi|597749690|ref|XP_007236774.1|5.268e-7628.77PREDICTED: conserved oligomeric Golgi complex subu... [more]
gi|1129987002|ref|XP_019750243.1|3.710e-7528.88PREDICTED: conserved oligomeric Golgi complex subu... [more]
gi|1188093833|ref|XP_020793358.1|7.149e-7528.61conserved oligomeric Golgi complex subunit 6, part... [more]
gi|1168917992|ref|XP_020501979.1|2.466e-7428.85conserved oligomeric Golgi complex subunit 6 [Labr... [more]
gi|589929669|ref|XP_006977647.1|1.016e-7328.13PREDICTED: conserved oligomeric Golgi complex subu... [more]
gi|919047363|ref|XP_013406875.1|1.297e-7327.36PREDICTED: conserved oligomeric Golgi complex subu... [more]
gi|1083273863|ref|XP_018620000.1|1.785e-7329.62PREDICTED: conserved oligomeric Golgi complex subu... [more]
gi|831308239|ref|XP_012686419.1|3.044e-7328.85PREDICTED: conserved oligomeric Golgi complex subu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8063rna8063Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications