EWM22660.1, cds8029 (CDS) Nannochloropsis gaditana

Overview
NameEWM22660.1
Unique Namecds8029
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:446321..446971 +
Alignment locationKK037247.1:447080..447523 +
Alignment locationKK037247.1:447648..448028 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22660.1
Producttrna dimethylallyltransferase 9
Orig transcript idgnl|cribi|Naga_100023g39.3976.mrna
GeneIPP
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:446321..446971 +
KK037247.1supercontigKK037247.1:447080..447523 +
KK037247.1supercontigKK037247.1:447648..448028 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR018022IPP_trans
Homology
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|585103225|gb|EWM22660.1| (trna dimethylallyltransferase 9 [Nannochloropsis gaditana])

HSP 1 Score: 1014.6 bits (2622), Expect = 0.000e+0
Identity = 491/491 (100.00%), Postives = 491/491 (100.00%), Query Frame = 0
Query:    1 MTVSSFCCNSILAFLVTYNILMVSASSCLIALCKTSLSSVHPLSSYHTRAVPASWRQFSSFDPMSASRAGGSRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEFLEDFATATRRYAKQQMVWFRAQAEFMWLRWNLQDLGPVLDAVRASVAEDEVSHLARQEGKGQKALRVENIMEGKRMRKYVSRVRAELTEDRLADLVRRAQECRRQVHERQNCQLREDDCCIRTK 491
            MTVSSFCCNSILAFLVTYNILMVSASSCLIALCKTSLSSVHPLSSYHTRAVPASWRQFSSFDPMSASRAGGSRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEFLEDFATATRRYAKQQMVWFRAQAEFMWLRWNLQDLGPVLDAVRASVAEDEVSHLARQEGKGQKALRVENIMEGKRMRKYVSRVRAELTEDRLADLVRRAQECRRQVHERQNCQLREDDCCIRTK
Sbjct:    1 MTVSSFCCNSILAFLVTYNILMVSASSCLIALCKTSLSSVHPLSSYHTRAVPASWRQFSSFDPMSASRAGGSRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEFLEDFATATRRYAKQQMVWFRAQAEFMWLRWNLQDLGPVLDAVRASVAEDEVSHLARQEGKGQKALRVENIMEGKRMRKYVSRVRAELTEDRLADLVRRAQECRRQVHERQNCQLREDDCCIRTK 491          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|298708287|emb|CBJ48350.1| (putative tRNA isopentenyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 307.76 bits (787), Expect = 2.699e-95
Identity = 193/479 (40.29%), Postives = 251/479 (52.40%), Query Frame = 0
Query:   75 KVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKE---------GIEGEMAEA------------------TALQEFLEDFATATRRYAKQQMVWFRAQA--EFMWLRWNLQDLGPVLDAV-RASVAE------------------------DEVSHLARQ------------EGKGQKALRVENIMEGKRMRKYVSRVR----AELTEDRLADLVRRAQECRRQVHERQNCQLRE 483
            KV+V+ GPTA GKS++AL +C+DL     GEI+S DSVQVYR + +G NKPS  E   V HHL+DV   D  E FTAGDFV++AE AIDD+L+RG +PVVVGGT MY  WLV G+PDAPK DP + Q     L PF D+ DW G L LL A N+ RAA +  NDWYRL R+LEV    +  G +                FTG+R+  +++KYDFR FF+I  RE L R ID+RC +M+  GLL ETA LL  G L+P+SP GRAIGYRQ I++L +E          I G    A                  T   EF   FA  TR+Y+ +QM WFR+    +F W  W+L   GP+ +   RA   E                        D  + +A Q             G+ Q  LR EN      M++YVS +          + L  LV   +E   ++ + Q+ Q R+
Sbjct:   70 KVIVIAGPTATGKSSIALALCRDLG----GEIVSCDSVQVYRDVFIGCNKPSPEEMKEVRHHLVDVAPLD--ETFTAGDFVQRAEAAIDDILSRGRVPVVVGGTMMYLHWLVHGKPDAPKKDPAVAQAVATELLPFHDRGDWDGALELLAAVNSRRAASMAKNDWYRLSRSLEVLRVPNDTGEE---------------VFTGVRA-PINKKYDFRSFFIIGDRERLFRRIDKRCEEMLMRGLLPETAGLLVRGMLDPASPAGRAIGYRQAIDFLHQEARLADDLRPAIAGASGSADANREATEVTATAAADPETRFLEFFLTFAAKTRQYSGEQMKWFRSSKGRDFSWQAWDLG--GPIEEVPRRAGSGEKRGGGAKSHEAGSCARAGDGCGWRDVATSIAEQFELPRERFDEDLGGESQAMLRSENRQRAGDMKRYVSELSLLGGGGTENEALGRLVLETEELAARIRQAQHEQFRD 524          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|922867485|gb|KOO34112.1| (tRNA dimethylallyltransferase 9 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 295.434 bits (755), Expect = 3.872e-92
Identity = 173/359 (48.19%), Postives = 212/359 (59.05%), Query Frame = 0
Query:   92 LRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEFLEDFATATRRYAKQQMVWFRAQAEFMWLRWNLQDLGPVLDAVRASVAEDEVSHLARQEGKGQKALRVENIMEGKRMRKYVSRV 450
            +R+C+ L     GE+ISVDSVQVYRGL +G+NKPS  ERAR+ HHLLDV D D  E +TAG F   A  A+++VLARG +PV+VGGTSMY +WLV GRP+APK+DP + +R R +LAP      W  GL  L A +  RA  L  NDWYRL RAL VAL TS       AA+P  P          +RS       D RCFFL A RE LCR ID RC  M+E GLLEE + LLA+G L PSSP GRAIGYRQ ++YL +       AE  AL EFLE F  A+RRYA QQ+ WFR + +F W+  +      V   V   +  +        +   Q  LR     E KRM+ Y  R+
Sbjct:    1 MRLCELLP----GELISVDSVQVYRGLQIGANKPSADERARIVHHLLDVRDPD--EEYTAGAFYADALRAVEEVLARGRVPVLVGGTSMYLRWLVSGRPEAPKADPAIAERVRLLLAPLEASGSWAEGLEQLAALDGARAEMLSRNDWYRLSRALTVALQTSSTA----AALPRLPDPE---GLDALRS-----SLDLRCFFLAAPREALCRRIDARCEAMLEAGLLEEVSSLLASGRLLPSSPAGRAIGYRQVLDYLLRSPWAP--AEGVALVEFLEGFTAASRRYAAQQVKWFRNEPQFEWVEADWAAPETVEQHVLGQLDLERARFEQLLQAPRQAELRALRPDEAKRMKTYAPRL 339          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|1072915802|ref|XP_018468442.1| (PREDICTED: tRNA dimethylallyltransferase 9-like [Raphanus sativus])

HSP 1 Score: 260.381 bits (664), Expect = 7.627e-78
Identity = 143/340 (42.06%), Postives = 193/340 (56.76%), Query Frame = 0
Query:   73 RPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPP---------SPSAHS------SSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEG--GLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEFLEDFATATRRYAKQQMVWFRAQAEFMWL 395
            + KV+V++GPT  GKS LAL + + L     GEIIS DSVQVY+GLDVGS KPS  +R  VPHHL+D+L     + ++ G F     EA  D+L+RG +P+V GGT +Y +W + G+PD PK  PE+      ML  F  + +W G +  +     ++A+ L  NDWYRL R+LE+  TT   GS P +   P         SP A++      SS+   I+S      YDF CFFL + R +L R ID RC  M+ G  G+L E   LL  G L  +S   RAIGYRQ +EYLSK   +G ++       FL  F  A+R +AK+QM WFR +  + WL
Sbjct:   49 KEKVIVISGPTGAGKSRLALELAKRL----NGEIISADSVQVYKGLDVGSAKPSARDRKEVPHHLIDILHPS--QDYSVGQFFEDGREATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIVSEVHDMLIDFQTEYNWDGAVEFVVNAGVQKASSLARNDWYRLRRSLEILKTT---GSPPSSFRVPYDSFRENLNSPDANNDFDENGSSADISIQSIKTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGAEGVLSEARWLLDLGLLPNTSSATRAIGYRQAMEYLSKCRQQGGVSSPGEFYWFLNKFQQASRNFAKRQMTWFRCEPMYHWL 379          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|1072914871|ref|XP_018467979.1| (PREDICTED: tRNA dimethylallyltransferase 9 [Raphanus sativus])

HSP 1 Score: 259.225 bits (661), Expect = 1.727e-77
Identity = 142/340 (41.76%), Postives = 193/340 (56.76%), Query Frame = 0
Query:   73 RPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPP---------SPSAHS------SSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEG--GLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEFLEDFATATRRYAKQQMVWFRAQAEFMWL 395
            + KV+V++GPT  GKS LAL + + L     GEIIS DSVQVY+GLDVGS KPS  +R  VPHHL+D+L     + ++ G F     EA  D+L+RG +P+V GGT +Y +W + G+PD PK  PE+      ML  F  + +W G +  +     ++A+ L  NDWYRL R+LE+  TT   GS P +   P         SP A++      SS+   I++      YDF CFFL + R +L R ID RC  M+ G  G+L E   LL  G L  +S   RAIGYRQ +EYLSK   +G ++       FL  F  A+R +AK+QM WFR +  + WL
Sbjct:   49 KEKVIVISGPTGAGKSRLALELAKRL----NGEIISADSVQVYKGLDVGSAKPSARDRKEVPHHLIDILHPS--QDYSVGQFFEDGREATKDILSRGRVPIVTGGTGLYLRWFIYGKPDVPKPSPEIVSEVHDMLIDFQTEYNWDGAVEFVVNAGDQKASSLARNDWYRLRRSLEILKTT---GSPPSSFRVPYDSFRDNLNSPDANNDFDENGSSADISIQNIKTDLDYDFLCFFLSSPRVDLYRSIDFRCEDMLSGAEGVLSEARWLLDLGLLPNTSSATRAIGYRQAMEYLSKCRQQGGVSSPGEFYWFLNKFQQASRNFAKRQMTWFRCEPMYHWL 379          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|545700370|ref|XP_005702563.1| (tRNA dimethylallyltransferase isoform 2 [Galdieria sulphuraria] >gi|452818897|gb|EME26043.1| tRNA dimethylallyltransferase isoform 2 [Galdieria sulphuraria])

HSP 1 Score: 254.988 bits (650), Expect = 5.666e-77
Identity = 144/329 (43.77%), Postives = 194/329 (58.97%), Query Frame = 0
Query:   72 SRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSD-PEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMV-EGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEF---LEDFATATRRYAKQQMVWFRAQAEFMWL 395
            ++PKV+V++GPT VGK+    RI  +LA    GEIIS DSVQVYR LDVGSNKPS  ER  + HHL+D+++      F+AG+F ++A EA   +L+R  +P+VVGGTSMY +W + G P  P +   +       L       +W   + LL+  +  RA K+  NDWYRL RALE+   T +  S+ P     P+P         GI    L   YDFRCFFL+A R+EL R IDRRC +M+ + GLL+E   LL    L+  S  G+AIGYRQTIEYL+         E  AL +F   L DF  A+R+YA++Q+ WFR +  F W+
Sbjct:    8 AKPKVIVISGPTGVGKT----RISIELAKLLNGEIISADSVQVYRKLDVGSNKPSIEERNGIVHHLIDIVEPTY--EFSAGEFFQRAREATKSILSRHKVPIVVGGTSMYVRWYIYGLPATPPATNSVAYYVSTTLEEL--NGNWDLAIELLEQLDPMRATKICRNDWYRLRRALEIYYATGKPLSELPLQGGAPNP----KKLLQGIPVTDLD--YDFRCFFLVAPRKELNRFIDRRCERMIAQDGLLKEVFELLYKRELSKDSSAGKAIGYRQTIEYLTNH-------ETNALDQFMKYLRDFQNASRQYARRQLQWFRGEELFHWV 315          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|1035899148|gb|OAY28749.1| (hypothetical protein MANES_15G092000 [Manihot esculenta] >gi|1035899149|gb|OAY28750.1| hypothetical protein MANES_15G092000 [Manihot esculenta])

HSP 1 Score: 257.684 bits (657), Expect = 6.016e-77
Identity = 163/421 (38.72%), Postives = 229/421 (54.39%), Query Frame = 0
Query:   65 SASRAGGSRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSDPEAAVPP---------------SPSAHSSSSFT-GIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMVEG--GLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEFLEDFATATRRYAKQQMVWFRAQAEFMWLRWNLQDLGPVLDAVRASVAEDEVSHLARQEGKGQKALRVENIMEGKR----MRKYVSRVRAELTEDRLADLV 463
            S+   G  + KVVV++GPT  GK+ LAL + + L     GEIIS DSVQVYRGLDVGS KPS +ER  VPHHL+D+L     E ++ G F   A +A  D+L  G +P+V GGT +Y +W + G+PD PK+ PE+   A   LA     ++W   + L+      +A  L ANDWYRL R+LE+   T   GS P A   P               S +AHSS   +  ++ + L   Y+F CFFL   R +L R ID RC  M+ G  G+L E   LL  G L  S+ P RAIGYRQ +EYL K   +G  + A     FL +F  A+R +AK+QM WFR +  + WL  + + L  VL+ V  +   DE  +L   E     +LR++  +  +R    ++ Y S+ R  ++ +  AD++
Sbjct:   35 SSVSLGNKKEKVVVISGPTGSGKTRLALELAKRL----NGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLVDILHPS--EDYSVGQFFEDARQATRDILDNGRVPIVAGGTGLYLRWFIYGKPDVPKASPEIASEAYSELAELQKNENWDEAVQLVVKAGDPKAQFLAANDWYRLRRSLEIIKVT---GSPPSAFQVPYDSFKEQLDTSLMENSETAHSSHDVSEEVKPKDLD--YEFFCFFLSTPRLDLYRSIDYRCEDMLLGTDGILAEAKWLLDIGLLPNSNSPTRAIGYRQAMEYLLKCRQQGGRSSAGDFYAFLSEFQKASRNFAKRQMTWFRNEHIYHWLDAS-KPLENVLNFVYDAY-NDETRNLVIPE-----SLRMKKDISSRREIIQLKTYRSKNRHFVSRNDCADIL 437          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|545700368|ref|XP_005702562.1| (tRNA dimethylallyltransferase isoform 1 [Galdieria sulphuraria] >gi|452818896|gb|EME26042.1| tRNA dimethylallyltransferase isoform 1 [Galdieria sulphuraria])

HSP 1 Score: 254.988 bits (650), Expect = 1.376e-76
Identity = 144/329 (43.77%), Postives = 194/329 (58.97%), Query Frame = 0
Query:   72 SRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSD-PEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMV-EGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEF---LEDFATATRRYAKQQMVWFRAQAEFMWL 395
            ++PKV+V++GPT VGK+    RI  +LA    GEIIS DSVQVYR LDVGSNKPS  ER  + HHL+D+++      F+AG+F ++A EA   +L+R  +P+VVGGTSMY +W + G P  P +   +       L       +W   + LL+  +  RA K+  NDWYRL RALE+   T +  S+ P     P+P         GI    L   YDFRCFFL+A R+EL R IDRRC +M+ + GLL+E   LL    L+  S  G+AIGYRQTIEYL+         E  AL +F   L DF  A+R+YA++Q+ WFR +  F W+
Sbjct:    8 AKPKVIVISGPTGVGKT----RISIELAKLLNGEIISADSVQVYRKLDVGSNKPSIEERNGIVHHLIDIVEPTY--EFSAGEFFQRAREATKSILSRHKVPIVVGGTSMYVRWYIYGLPATPPATNSVAYYVSTTLEEL--NGNWDLAIELLEQLDPMRATKICRNDWYRLRRALEIYYATGKPLSELPLQGGAPNP----KKLLQGIPVTDLD--YDFRCFFLVAPRKELNRFIDRRCERMIAQDGLLKEVFELLYKRELSKDSSAGKAIGYRQTIEYLTNH-------ETNALDQFMKYLRDFQNASRQYARRQLQWFRGEELFHWV 315          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|545711526|ref|XP_005708069.1| (tRNA dimethylallyltransferase isoform 1 [Galdieria sulphuraria] >gi|452824547|gb|EME31549.1| tRNA dimethylallyltransferase isoform 1 [Galdieria sulphuraria])

HSP 1 Score: 255.373 bits (651), Expect = 1.561e-76
Identity = 144/329 (43.77%), Postives = 194/329 (58.97%), Query Frame = 0
Query:   72 SRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSD-PEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMV-EGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEF---LEDFATATRRYAKQQMVWFRAQAEFMWL 395
            ++PKV+V++GPT VGK+    RI  +LA    GEIIS DSVQVYR LDVGSNKPS  ER  + HHL+D+++      F+AG+F ++A EA   +L+R  +P+VVGGTSMY +W + G P  P +   +       L       +W   + LL+  +  RA K+  NDWYRL RALE+   T +  S+ P     P+P         GI    L   YDFRCFFL+A R+EL R IDRRC +M+ + GLL+E   LL    L+  S  G+AIGYRQTIEYL+         E  AL +F   L DF  A+R+YA++Q+ WFR +  F W+
Sbjct:   61 AKPKVIVISGPTGVGKT----RISIELAKLLNGEIISADSVQVYRKLDVGSNKPSIEERNGIVHHLIDIVEPTY--EFSAGEFFQRAREATKSILSRHKVPIVVGGTSMYVRWYIYGLPATPPATNSVAYYVSTTLEEL--NGNWDLAIELLEQLDPMRATKICRNDWYRLRRALEIYYATGKPLSELPLQGGAPNP----KKLLQGIPVTDLD--YDFRCFFLVAPRKELNRFIDRRCERMIAQDGLLKEVFELLYKRELSKDSSAGKAIGYRQTIEYLTNH-------ETNALDQFMKYLRDFQNASRQYARRQLQWFRGEELFHWV 368          
BLAST of EWM22660.1 vs. NCBI_GenBank
Match: gi|545711524|ref|XP_005708068.1| (tRNA dimethylallyltransferase isoform 2 [Galdieria sulphuraria] >gi|452824546|gb|EME31548.1| tRNA dimethylallyltransferase isoform 2 [Galdieria sulphuraria])

HSP 1 Score: 256.144 bits (653), Expect = 2.285e-76
Identity = 158/415 (38.07%), Postives = 227/415 (54.70%), Query Frame = 0
Query:   72 SRPKVVVVTGPTAVGKSNLALRICQDLAPGARGEIISVDSVQVYRGLDVGSNKPSEAERARVPHHLLDVLDADSPEAFTAGDFVRKAEEAIDDVLARGGMPVVVGGTSMYTQWLVQGRPDAPKSDPEMEQRARKMLAPFLDKKDWKGGLSLLKAHNTERAAKLHANDWYRLERALEVALTTSQKGSD-PEAAVPPSPSAHSSSSFTGIRSQTLSRKYDFRCFFLIAAREELCRLIDRRCLQMV-EGGLLEETAHLLAAGTLNPSSPPGRAIGYRQTIEYLSKEGIEGEMAEATALQEF---LEDFATATRRYAKQQMVWFRAQAEFMW-----LRWNLQDLGPVLDAVRASVA-EDEVSHLARQEGKGQKALRVENIMEGKRMRKYVSRVRAELTEDRLADLVRRAQECRRQVHE 475
            ++PKV+V++GPT VGK+    RI  +LA    GEIIS DSVQVYR LDVGSNKPS  ER  + HHL+D+++      F+AG+F ++A EA   +L+R  +P+VVGGTSMY +W + G P  P +   +       L       +W   + LL+  +  RA K+  NDWYRL RALE+   T +  S+ P     P+P         GI    L   YDFRCFFL+A R+EL R IDRRC +M+ + GLL+E   LL    L+  S  G+AIGYRQTIEYL+         E  AL +F   L DF  A+R+YA++Q+ WFR +  F W        ++  + P+   +    A  +E     RQ    +  +R  ++ +GK M+ Y   +     ++ +   VR A + + ++ E
Sbjct:   61 AKPKVIVISGPTGVGKT----RISIELAKLLNGEIISADSVQVYRKLDVGSNKPSIEERNGIVHHLIDIVEPTY--EFSAGEFFQRAREATKSILSRHKVPIVVGGTSMYVRWYIYGLPATPPATNSVAYYVSTTLEEL--NGNWDLAIELLEQLDPMRATKICRNDWYRLRRALEIYYATGKPLSELPLQGGAPNP----KKLLQGIPVTDLD--YDFRCFFLVAPRKELNRFIDRRCERMIAQDGLLKEVFELLYKRELSKDSSAGKAIGYRQTIEYLTNH-------ETNALDQFMKYLRDFQNASRQYARRQLQWFRGEELFHWVPVEMFSNDISHVAPIEYIMHWFAATSEEYKESTRQRIDAE--VREISLKQGKEMKTYTPELVLFQDQNLIESTVREACDFQFKLRE 452          
The following BLAST results are available for this feature:
BLAST of EWM22660.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103225|gb|EWM22660.1|0.000e+0100.00trna dimethylallyltransferase 9 [Nannochloropsis g... [more]
gi|298708287|emb|CBJ48350.1|2.699e-9540.29putative tRNA isopentenyltransferase [Ectocarpus s... [more]
gi|922867485|gb|KOO34112.1|3.872e-9248.19tRNA dimethylallyltransferase 9 [Chrysochromulina ... [more]
gi|1072915802|ref|XP_018468442.1|7.627e-7842.06PREDICTED: tRNA dimethylallyltransferase 9-like [R... [more]
gi|1072914871|ref|XP_018467979.1|1.727e-7741.76PREDICTED: tRNA dimethylallyltransferase 9 [Raphan... [more]
gi|545700370|ref|XP_005702563.1|5.666e-7743.77tRNA dimethylallyltransferase isoform 2 [Galdieria... [more]
gi|1035899148|gb|OAY28749.1|6.016e-7738.72hypothetical protein MANES_15G092000 [Manihot escu... [more]
gi|545700368|ref|XP_005702562.1|1.376e-7643.77tRNA dimethylallyltransferase isoform 1 [Galdieria... [more]
gi|545711526|ref|XP_005708069.1|1.561e-7643.77tRNA dimethylallyltransferase isoform 1 [Galdieria... [more]
gi|545711524|ref|XP_005708068.1|2.285e-7638.07tRNA dimethylallyltransferase isoform 2 [Galdieria... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8051rna8051Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications