EWM22666.1, cds8012 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|585103231|gb|EWM22666.1| (Tesmin/TSO1-like cysteine-rich [Nannochloropsis gaditana]) HSP 1 Score: 1524.61 bits (3946), Expect = 0.000e+0 Identity = 738/738 (100.00%), Postives = 738/738 (100.00%), Query Frame = 0
Query: 1 MKLGGNMKEQPCLPNKSRTWSWDTSRFESNFARGSTRRSPFFLRSLPPSTMSTTGCKPSSASSTPRRHTPNRRVVRTLNGQELSISIPDNFHQQHMHITHHLQQQHCQQLQQPGSANSMMVSPALPSPNFNNFMLTLSPLMQLSSPQPTMSPRDEMGVSSNGGIPSSMAHMVGTADEIQFAFQTGNEVATPTVTSTTNNNTASLNLAPPPLPTQALMPPPPPRVRPPREQEGDLESQGHEGSRHERKGLDDFQGLEQHEQQQQLLEREEEIDPHNQHLPVAAPEALGGGDGALADKLNLMHMVMVDAECIMEGKGSLMGPTTPTMQGVGMESYPRSLVMGLGAGEAFDASDSDEGEKGECEDGGTGEGMFGKHLERRVVQLYGYGVENEEDEEIYEAEGGYISSSSECTKTTLEHLQQEHRGAHNHKHPNHSPSPAVPGISRSQGQGPSAAAMAAAAAATSSRSRCNLSSQRRNQSSNNSHPGGSSRPVRVEAAIRRQNPSQEARRSPPLNGSGGGTPQGRGTSGLAATRSSKKCNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGTHRRTSLPGGQCSVGDNGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQNNPEASAGLHVKKKRGSTTHGKGQHPKQVQRRQQASPSLSDSHDLTPTRVTGTAVI 738
MKLGGNMKEQPCLPNKSRTWSWDTSRFESNFARGSTRRSPFFLRSLPPSTMSTTGCKPSSASSTPRRHTPNRRVVRTLNGQELSISIPDNFHQQHMHITHHLQQQHCQQLQQPGSANSMMVSPALPSPNFNNFMLTLSPLMQLSSPQPTMSPRDEMGVSSNGGIPSSMAHMVGTADEIQFAFQTGNEVATPTVTSTTNNNTASLNLAPPPLPTQALMPPPPPRVRPPREQEGDLESQGHEGSRHERKGLDDFQGLEQHEQQQQLLEREEEIDPHNQHLPVAAPEALGGGDGALADKLNLMHMVMVDAECIMEGKGSLMGPTTPTMQGVGMESYPRSLVMGLGAGEAFDASDSDEGEKGECEDGGTGEGMFGKHLERRVVQLYGYGVENEEDEEIYEAEGGYISSSSECTKTTLEHLQQEHRGAHNHKHPNHSPSPAVPGISRSQGQGPSAAAMAAAAAATSSRSRCNLSSQRRNQSSNNSHPGGSSRPVRVEAAIRRQNPSQEARRSPPLNGSGGGTPQGRGTSGLAATRSSKKCNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGTHRRTSLPGGQCSVGDNGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQNNPEASAGLHVKKKRGSTTHGKGQHPKQVQRRQQASPSLSDSHDLTPTRVTGTAVI
Sbjct: 1 MKLGGNMKEQPCLPNKSRTWSWDTSRFESNFARGSTRRSPFFLRSLPPSTMSTTGCKPSSASSTPRRHTPNRRVVRTLNGQELSISIPDNFHQQHMHITHHLQQQHCQQLQQPGSANSMMVSPALPSPNFNNFMLTLSPLMQLSSPQPTMSPRDEMGVSSNGGIPSSMAHMVGTADEIQFAFQTGNEVATPTVTSTTNNNTASLNLAPPPLPTQALMPPPPPRVRPPREQEGDLESQGHEGSRHERKGLDDFQGLEQHEQQQQLLEREEEIDPHNQHLPVAAPEALGGGDGALADKLNLMHMVMVDAECIMEGKGSLMGPTTPTMQGVGMESYPRSLVMGLGAGEAFDASDSDEGEKGECEDGGTGEGMFGKHLERRVVQLYGYGVENEEDEEIYEAEGGYISSSSECTKTTLEHLQQEHRGAHNHKHPNHSPSPAVPGISRSQGQGPSAAAMAAAAAATSSRSRCNLSSQRRNQSSNNSHPGGSSRPVRVEAAIRRQNPSQEARRSPPLNGSGGGTPQGRGTSGLAATRSSKKCNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGTHRRTSLPGGQCSVGDNGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQNNPEASAGLHVKKKRGSTTHGKGQHPKQVQRRQQASPSLSDSHDLTPTRVTGTAVI 738
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|553196017|ref|XP_005856249.1| (tesmin tso1-like cxc domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422292803|gb|EKU20105.1| tesmin tso1-like cxc domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 753.051 bits (1943), Expect = 0.000e+0 Identity = 364/365 (99.73%), Postives = 365/365 (100.00%), Query Frame = 0
Query: 374 LERRVVQLYGYGVENEEDEEIYEAEGGYISSSSECTKTTLEHLQQEHRGAHNHKHPNHSPSPAVPGISRSQGQGPSAAAMAAAAAATSSRSRCNLSSQRRNQSSNNSHPGGSSRPVRVEAAIRRQNPSQEARRSPPLNGSGGGTPQGRGTSGLAATRSSKKCNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGTHRRTSLPGGQCSVGDNGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQNNPEASAGLHVKKKRGSTTHGKGQHPKQVQRRQQASPSLSDSHDLTPTRVTGTAVI 738
+ERRVVQLYGYGVENEEDEEIYEAEGGYISSSSECTKTTLEHLQQEHRGAHNHKHPNHSPSPAVPGISRSQGQGPSAAAMAAAAAATSSRSRCNLSSQRRNQSSNNSHPGGSSRPVRVEAAIRRQNPSQEARRSPPLNGSGGGTPQGRGTSGLAATRSSKKCNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGTHRRTSLPGGQCSVGDNGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQNNPEASAGLHVKKKRGSTTHGKGQHPKQVQRRQQASPSLSDSHDLTPTRVTGTAVI
Sbjct: 1 MERRVVQLYGYGVENEEDEEIYEAEGGYISSSSECTKTTLEHLQQEHRGAHNHKHPNHSPSPAVPGISRSQGQGPSAAAMAAAAAATSSRSRCNLSSQRRNQSSNNSHPGGSSRPVRVEAAIRRQNPSQEARRSPPLNGSGGGTPQGRGTSGLAATRSSKKCNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGTHRRTSLPGGQCSVGDNGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQNNPEASAGLHVKKKRGSTTHGKGQHPKQVQRRQQASPSLSDSHDLTPTRVTGTAVI 365
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|695444263|ref|XP_009533925.1| (hypothetical protein PHYSODRAFT_520155 [Phytophthora sojae] >gi|348671359|gb|EGZ11180.1| hypothetical protein PHYSODRAFT_520155 [Phytophthora sojae]) HSP 1 Score: 157.147 bits (396), Expect = 5.355e-36 Identity = 88/180 (48.89%), Postives = 107/180 (59.44%), Query Frame = 0
Query: 513 SGGGTPQGRGTSGLAATRSSKK--CNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGTHRRTSL---PGGQCSVGD----NGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQN 683
S P G G+A T+ KK CNC+KSKCLKLYCECFA G YC + C CLDC+NT A E+VR QA+ + L +NP+AF KI GAT + G+ RR S+ G S G +G + Q + G L T H GC+CKKS C KKYCECF AGV CGENC+C C+N
Sbjct: 544 SASKAPLGPAPVGMA-TQVPKKAPCNCKKSKCLKLYCECFASGGYCDESCNCLDCSNTPATEEVRQQAIAARLEKNPNAFKPKI-----GATPGMTPGSARRLSVGASGGSHASPGTFLSPSGRLNLQQQHQLLSAGLLSTKMHKHGCHCKKSACQKKYCECFQAGVPCGENCRCIDCKN 717
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|566014296|gb|ETI37207.1| (hypothetical protein F443_16782 [Phytophthora parasitica P1569] >gi|568039817|gb|ETM37293.1| hypothetical protein L914_16140 [Phytophthora parasitica] >gi|570317999|gb|ETO65947.1| hypothetical protein F444_16794 [Phytophthora parasitica P1976]) HSP 1 Score: 153.68 bits (387), Expect = 8.837e-35 Identity = 81/155 (52.26%), Postives = 96/155 (61.94%), Query Frame = 0
Query: 535 CNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGT--HRRTSLPGGQCSVGDN----GETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQN 683
CNC+KSKCLKLYCECFA G YC + C CLDC NT A E+VR QA+ S L +NP+AF KI GAT V T RR S+ G + S G G+ ++ Q + G T H GC+CKKS C KKYCECF AGV CGENC+C C+N
Sbjct: 657 CNCKKSKCLKLYCECFASGGYCDESCNCLDCANTTATEEVRQQAIASRLEKNPNAFKPKI-----GATSTVVTVTPGARRLSV-GRRVSAGAFVSPPGQLSLQRQ-QILSAGMSTTKMHKHGCHCKKSACQKKYCECFQAGVPCGENCRCIDCKN 804
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|567951720|gb|ETK77414.1| (hypothetical protein L915_16315 [Phytophthora parasitica]) HSP 1 Score: 153.295 bits (386), Expect = 9.076e-35 Identity = 79/157 (50.32%), Postives = 91/157 (57.96%), Query Frame = 0
Query: 535 CNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGAT---GPVAMGTHRRTSL-----PGGQCSVGDNGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQN 683
CNC+KSKCLKLYCECFA G YC + C CLDC NT A E+VR QA+ S L +NP+AF KI T T G + RR S P GQ S+ Q + G T H GC+CKKS C KKYCECF AGV CGENC+C C+N
Sbjct: 657 CNCKKSKCLKLYCECFASGGYCDESCNCLDCANTTATEEVRQQAIASRLEKNPNAFKPKIGATSTVVTVTPGARRLSVGRRVSAGAFVSPPGQLSLQRQ---------QILSAGMSTTKMHKHGCHCKKSACQKKYCECFQAGVPCGENCRCIDCKN 804
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|970632129|gb|KUF78512.1| (lin-54 protein [Phytophthora nicotianae]) HSP 1 Score: 152.525 bits (384), Expect = 1.949e-34 Identity = 81/155 (52.26%), Postives = 95/155 (61.29%), Query Frame = 0
Query: 535 CNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGT--HRRTSLPGGQCSVGDN----GETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQN 683
CNC+KSKCLKLYCECFA G YC + C CLDC NT A E+VR QA+ S L +NP+AF KI GAT V T RR S+ G + S G G+ ++ Q G T H GC+CKKS C KKYCECF AGV CGENC+C C+N
Sbjct: 657 CNCKKSKCLKLYCECFASGGYCDESCNCLDCANTTATEEVRQQAIASRLEKNPNAFKPKI-----GATSTVVTVTPGARRLSV-GRRVSAGAFVSPPGQLSLQRQ-QILNAGMSTTKMHKHGCHCKKSACQKKYCECFQAGVPCGENCRCIDCKN 804
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|675206299|ref|XP_008912034.1| (hypothetical protein PPTG_16173 [Phytophthora parasitica INRA-310] >gi|568087684|gb|ETN02552.1| hypothetical protein PPTG_16173 [Phytophthora parasitica INRA-310]) HSP 1 Score: 152.525 bits (384), Expect = 1.949e-34 Identity = 81/155 (52.26%), Postives = 95/155 (61.29%), Query Frame = 0
Query: 535 CNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGT--HRRTSLPGGQCSVGDN----GETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQN 683
CNC+KSKCLKLYCECFA G YC + C CLDC NT A E+VR QA+ S L +NP+AF KI GAT V T RR S+ G + S G G+ ++ Q G T H GC+CKKS C KKYCECF AGV CGENC+C C+N
Sbjct: 657 CNCKKSKCLKLYCECFASGGYCDESCNCLDCANTTATEEVRQQAIASRLEKNPNAFKPKI-----GATSTVVTVTPGARRLSV-GRRVSAGAFVSPPGQLSLQRQ-QILNAGMSTTKMHKHGCHCKKSACQKKYCECFQAGVPCGENCRCIDCKN 804
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|570972181|gb|ETP35153.1| (hypothetical protein F442_16610 [Phytophthora parasitica P10297]) HSP 1 Score: 152.525 bits (384), Expect = 1.966e-34 Identity = 81/155 (52.26%), Postives = 95/155 (61.29%), Query Frame = 0
Query: 535 CNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGT--HRRTSLPGGQCSVGDN----GETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQN 683
CNC+KSKCLKLYCECFA G YC + C CLDC NT A E+VR QA+ S L +NP+AF KI GAT V T RR S+ G + S G G+ ++ Q G T H GC+CKKS C KKYCECF AGV CGENC+C C+N
Sbjct: 657 CNCKKSKCLKLYCECFASGGYCDESCNCLDCANTTATEEVRQQAIASRLEKNPNAFKPKI-----GATSTVVTVTPGARRLSV-GRRVSAGAFVSPPGQLSLQRQ-QILNAGMSTTKMHKHGCHCKKSACQKKYCECFQAGVPCGENCRCIDCKN 804
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|568009918|gb|ETL84113.1| (hypothetical protein L917_16020 [Phytophthora parasitica]) HSP 1 Score: 152.525 bits (384), Expect = 1.983e-34 Identity = 79/157 (50.32%), Postives = 90/157 (57.32%), Query Frame = 0
Query: 535 CNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGAT---GPVAMGTHRRTSL-----PGGQCSVGDNGETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQN 683
CNC+KSKCLKLYCECFA G YC + C CLDC NT A E+VR QA+ S L +NP+AF KI T T G + RR S P GQ S+ Q G T H GC+CKKS C KKYCECF AGV CGENC+C C+N
Sbjct: 657 CNCKKSKCLKLYCECFASGGYCDESCNCLDCANTTATEEVRQQAIASRLEKNPNAFKPKIGATSTVVTVTPGARRLSVGRRVSAGAFVSPPGQLSLQRQ---------QILNAGMSTTKMHKHGCHCKKSACQKKYCECFQAGVPCGENCRCIDCKN 804
BLAST of EWM22666.1 vs. NCBI_GenBank
Match: gi|567980403|gb|ETL30866.1| (hypothetical protein L916_16211 [Phytophthora parasitica]) HSP 1 Score: 152.525 bits (384), Expect = 2.092e-34 Identity = 81/155 (52.26%), Postives = 95/155 (61.29%), Query Frame = 0
Query: 535 CNCRKSKCLKLYCECFAMGAYCRDDCGCLDCNNTLAFEQVRTQAVESILSRNPHAFTEKIQFIETGATGPVAMGT--HRRTSLPGGQCSVGDN----GETTMMGGLQGTAGGALPTAAHVRGCNCKKSLCIKKYCECFFAGVYCGENCQCEGCQN 683
CNC+KSKCLKLYCECFA G YC + C CLDC NT A E+VR QA+ S L +NP+AF KI GAT V T RR S+ G + S G G+ ++ Q G T H GC+CKKS C KKYCECF AGV CGENC+C C+N
Sbjct: 657 CNCKKSKCLKLYCECFASGGYCDESCNCLDCANTTATEEVRQQAIASRLEKNPNAFKPKI-----GATSTVVTVTPGARRLSV-GRRVSAGAFVSPPGQLSLQRQ-QILNAGMSTTKMHKHGCHCKKSACQKKYCECFQAGVPCGENCRCIDCKN 804 The following BLAST results are available for this feature:
BLAST of EWM22666.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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