EWM22651.1, cds7995 (CDS) Nannochloropsis gaditana

Overview
NameEWM22651.1
Unique Namecds7995
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:358445..359560 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22651.1
ProductDNA methylase, N-6 adenine-specific, conserved site
Orig transcript idgnl|cribi|Naga_100023g2.3967.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:358445..359560 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008168methyltransferase activity
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0032259methylation
Vocabulary: INTERPRO
TermDefinition
IPR002052DNA_methylase_N6_adenine_CS
Homology
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|585103216|gb|EWM22651.1| (DNA methylase, N-6 adenine-specific, conserved site [Nannochloropsis gaditana])

HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0
Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0
Query:    1 MVEKQRRDRKRKRKRSSPLPSTQEAEWPRKNPKFDTPPTSGSTATPEGQAYHEHGKFSSSSALPPASDAIAPSLIGKYHVARQQLGQASASKRRLSSPRLPSLFQPSEPSINRKFKSTTSTLTARIQPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKRLMLTNVKG 371
            MVEKQRRDRKRKRKRSSPLPSTQEAEWPRKNPKFDTPPTSGSTATPEGQAYHEHGKFSSSSALPPASDAIAPSLIGKYHVARQQLGQASASKRRLSSPRLPSLFQPSEPSINRKFKSTTSTLTARIQPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKRLMLTNVKG
Sbjct:    1 MVEKQRRDRKRKRKRSSPLPSTQEAEWPRKNPKFDTPPTSGSTATPEGQAYHEHGKFSSSSALPPASDAIAPSLIGKYHVARQQLGQASASKRRLSSPRLPSLFQPSEPSINRKFKSTTSTLTARIQPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKRLMLTNVKG 371          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|873226638|emb|CEM20936.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 208.764 bits (530), Expect = 2.908e-57
Identity = 110/248 (44.35%), Postives = 145/248 (58.47%), Query Frame = 0
Query:  129 KKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQ-----AAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKRLMLTNVKG 371
            K+   S+P++P+ T Y DHFE+PL AY+D+ P L+ +   LR+    L IYDP++C G     L SLGF  V ++ RDFY+DV   TVP YDV+VTNPP+SD+HKE ILRF L S +P  LLLPNYVA K Y+ +    L + ++ F+ VP  KYEY HPE TGH SSPFFSIW    G     +     S  Q       Q    +   LV TVE+L+         RP+ K+R+KM +      +G
Sbjct:  507 KRKTGSVPTFPYDTAYNDHFETPLAAYQDIAPALRHIAEGLRKTSGELRIYDPFYCTGKTKVHLHSLGFRSVIHEKRDFYSDVKNQTVPEYDVMVTNPPFSDEHKEDILRFALSSPQPCFLLLPNYVATKGYFRELRHRLDRLQRGFFAVPPLKYEYSHPENTGHASSPFFSIWFVAAGHQGTNNTTDATSLYQRWVRHLRQGGGPVGMALVWTVEELQRRHVVRDGNRPNPKKRRKMMKARCVETEG 754          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|159485216|ref|XP_001700642.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158272074|gb|EDO97880.1| predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 200.675 bits (509), Expect = 4.492e-57
Identity = 115/287 (40.07%), Postives = 150/287 (52.26%), Query Frame = 0
Query:  117 STTSTLTARIQPKKTQ-----ASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYY---LDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQ----------------------------AAQQQHSLPWRLVL--TVEDLRSTGAAPSWKRPSNKRRKKMKRLM 365
            + TST       KK Q      S   +PF  DY DHFE+   A +D++P L  L   L++    L IYDP+FC+G +    ++ GF    ++ RDFYADV +G +P YDV+VTNPPYS DHKE+ L FCL S KPW LLLPNYVA K+YY   +DA    PQ R PFYL P  +Y Y+HPEGTGH  SPF+SIW    G       G   ++L                                   S  W + L  +V+ LR   A P+ KR + K+R ++K+ M
Sbjct:  122 AATSTALGNGYEKKKQKHGKRVSSDDWPFEVDYNDHFETSSAAVDDIQPVLLALCNRLKKTPAQLAIYDPFFCKGGIRRHYEARGFTNFIHRKRDFYADVESGQLPEYDVMVTNPPYSADHKERALDFCLRSGKPWALLLPNYVATKAYYSELVDAAGTPPQQR-PFYLTPITRYAYEHPEGTGHAESPFYSIWYVGLGVHTEAVYGACRTKLDSAGAAAATGAGAGGASASKGGKGAGGVGGKGAGGSGGWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKKM 407          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|1004143398|gb|KXZ51381.1| (hypothetical protein GPECTOR_12g343 [Gonium pectorale])

HSP 1 Score: 194.512 bits (493), Expect = 6.900e-57
Identity = 98/211 (46.45%), Postives = 130/211 (61.61%), Query Frame = 0
Query:  157 DLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYY----LDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 363
            DL+P L  L + L++  + L +YDP+FC+G +    ++LGF    ++ RDFY DV AG +P YD+LVTNPPYS+DHKE+IL FCL S KPW LLLPNYVA K+Y+     D   P PQ  +PF+L P  +Y Y HPEGTGH  SPF+SIW    G       G   ++L A     S    L  +VE LR   A P+ KR + K+R ++K+
Sbjct:   17 DLQPVLTALCKKLKKRPSQLVVYDPFFCKGGIRKHYEALGFTSFVHENRDFYKDVEAGALPDYDILVTNPPYSEDHKERILDFCLRSGKPWALLLPNYVATKAYFSSLLADTATPPPQ--RPFFLTPRVRYTYDHPEGTGHAESPFYSIWYVGLGSHTEAVYGSCRAKLDAGGGGGSWDVSLARSVEALRQAKAVPTAKRLNPKQRLRLKK 225          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|219130185|ref|XP_002185252.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403431|gb|EEC43384.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 195.282 bits (495), Expect = 5.840e-56
Identity = 98/241 (40.66%), Postives = 144/241 (59.75%), Query Frame = 0
Query:  137 SYPFPTDYADHFESPLRAYEDLEPFLQWL---------RRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLG----SDKPWCLLLPNYVANKSYYLD-AIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 363
            SYP+P +Y DHFE+PL AY+DL+P + WL         ++    + T + IYDPY+C G   ++L  LG+  V ++ RDFY DV   TVP YD+L+TNPPYSD HK K L +C      S+KP+C+L+PNYVA++ Y+ +  ++  P+D    YL+P  +Y+Y HPEGTG   SPF S+W C  G    RD             + +   ++  ++ +L   GA  + KRP+ K+R+K+KR
Sbjct:   37 SYPYPVNYNDHFETPLLAYKDLQPLIDWLWSSSICRKVKQGRNAKATDISIYDPYYCDGRTRSILAELGYRNVLHEKRDFYKDVMRNTVPEYDLLLTNPPYSDQHKTKCLEYCFSQLRESNKPFCILMPNYVASRQYFRNFLMKEEPED--VVYLIPTLQYQYDHPEGTGKDKSPFDSLWFCGIG----RDRAKSAVEFWKGLGRATFCPKMAASLRELEDMGAISTQKRPNPKQRRKIKR 271          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|298715150|emb|CBJ27838.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 184.111 bits (466), Expect = 1.572e-51
Identity = 96/239 (40.17%), Postives = 144/239 (60.25%), Query Frame = 0
Query:  127 QPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYY-LDAIRPLPQ-DRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 363
            +P+++ A+   +PFPT+Y DHFE+PL+AY D+E  L  L + L +++  L I+DPY+C G    LL  LGFP+V +  +DFY  V     P +DVL+TNPPYS DHK++ L +C  S KPW LL+PNYVA K YY L  + P      +PFY+VP  KY + HPEGTGH  SPF  +W  + G          +++ +           ++ ++++L  TGA  + +R + ++RK +K+
Sbjct:   93 RPRESLAAPHHHPFPTEYGDHFETPLQAYRDIEVALALLAKLLDKKRKHLRIWDPYYCAGRTPRLLGQLGFPKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGPAAGPGGEPFYVVPENKYYFDHPEGTGHADSPFTGVWYVHCGSHTEAVFEGTITQKRGGVS-------VLRSLDELSQTGAVTTERRLNPRQRKALKK 324          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|551648195|ref|XP_005826880.1| (hypothetical protein GUITHDRAFT_113893 [Guillardia theta CCMP2712] >gi|428170980|gb|EKX39900.1| hypothetical protein GUITHDRAFT_113893 [Guillardia theta CCMP2712])

HSP 1 Score: 174.481 bits (441), Expect = 4.639e-47
Identity = 90/239 (37.66%), Postives = 134/239 (56.07%), Query Frame = 0
Query:  128 PKKTQ--ASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPS-YDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 363
            PK T+  +S+ ++PFPT+Y DHFE+   A  D+ P LQ   +   ++ +SL IYDPY+C GAV+   +  GF  V N   D Y    + T  S +D++VTNPP+S DHK+K L  C+  ++ W +LLP Y A K+Y+ + +    +  + FY +P  +Y+++HPEGTGH  SPFFSIW    G            R          P +L  TVEDL +  A  + KR + ++R  +K+
Sbjct:  172 PKGTEPTSSIHNHPFPTEYGDHFETSKVAIHDIAPILQQFAKVSGKQASSLAIYDPYYCDGAVIEHFRQEGFHNVHNLNVDCYQVWKSATTSSDFDIVVTNPPFSGDHKQKCLEHCVKREQAWMVLLPAYCATKNYFQELMSNWKERGKVFYGIPKVRYDFEHPEGTGHAVSPFFSIWFVYLGKHTEEIFSWYKKRYGDEG-----PLKLARTVEDLAANKAVDNRKRLNPRQRAALKK 405          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|223996249|ref|XP_002287798.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976914|gb|EED95241.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 166.007 bits (419), Expect = 1.463e-45
Identity = 85/187 (45.45%), Postives = 116/187 (62.03%), Query Frame = 0
Query:  138 YPFPTDYADHFESPLRAYEDLEPFLQW-LRRALRR--EKTSLHIYDPYFCRGAVVNLLK------SLGFPRVTN-----KMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCL----GSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAK--YEYQHPEGTGHISSPFFSIWVC 304
            YP+PTDY DHFE+P RAYED+ P + + L++ ++R   ++ + IYDPYFC G    LL       + G  R TN     + RDFY DV     P YD+LVTNPPYS DHKE+ L + +     + +P+ LL+PNYVA+K Y+   +  L +  Q  ++ P +K  YEY HPEGTGH +SPF S+W C
Sbjct:   58 YPYPTDYNDHFETPQRAYEDILPIIGYVLKKKIKRYNSQSDVTIYDPYFCTGRAATLLNATFEQHTTGNKRHTNIRIQHEKRDFYQDVRQNNTPQYDILVTNPPYSGDHKERCLEYVVDQLKNNQRPFFLLMPNYVASKEYFRKIV--LEEKIQIVFITPSSKHPYEYDHPEGTGHETSPFASVWFC 242          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|1199288302|gb|OUS43444.1| (hypothetical protein BE221DRAFT_194881 [Ostreococcus tauri])

HSP 1 Score: 164.466 bits (415), Expect = 5.914e-44
Identity = 86/189 (45.50%), Postives = 116/189 (61.38%), Query Frame = 0
Query:  122 LTARIQPKKTQASLPSYPF-PTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAK--YEYQHP----EGT-GHISSPFFSIW 302
            L+ +   + T AS     F   D ADH E+P RAY D+EPFL  + +AL+REK  L IYDPY+C G++V  L++LGF  V N+  DFY  VA  T P +DVLVTNPPYS DH ++IL FC  S+KPW LLLPN+V  KSYY + +    +  +P +L+P +   Y Y  P    +G     ++PF + W
Sbjct:   66 LSVKTSGRVTPASKGGLAFGDVDEADHCETPFRAYRDVEPFLFAIAKALKREKKDLRIYDPYYCEGSMVEHLRALGFESVYNRNEDFYEKVATKTTPDFDVLVTNPPYSGDHFKRILTFCRDSNKPWLLLLPNFVCRKSYYEECV---GERAKPLFLIPDSTKPYRYWAPGRNEDGVRAKGTTPFETFW 251          
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|693498069|emb|CEF99289.1| (DNA methylase, N-6 adenine-specific, conserved site [Ostreococcus tauri])

HSP 1 Score: 162.925 bits (411), Expect = 1.791e-43
Identity = 81/168 (48.21%), Postives = 108/168 (64.29%), Query Frame = 0
Query:  142 TDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAK--YEYQHP----EGT-GHISSPFFSIW 302
             D ADH E+P RAY D+EPFL  + +AL+REK  L IYDPY+C G++V  L++LGF  V N+  DFY  VA  T P +DVLVTNPPYS DH ++IL FC  S+KPW LLLPN+V  KSYY + +    +  +P +L+P +   Y Y  P    +G     ++PF + W
Sbjct:   87 VDEADHCETPFRAYRDVEPFLFAIAKALKREKKDLRIYDPYYCEGSMVEHLRALGFESVYNRNEDFYEKVATKTTPDFDVLVTNPPYSGDHFKRILTFCRDSNKPWLLLLPNFVCRKSYYEECV---GERAKPLFLIPDSTKPYRYWAPGRNEDGVRAKGTTPFETFW 251          
The following BLAST results are available for this feature:
BLAST of EWM22651.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103216|gb|EWM22651.1|0.000e+0100.00DNA methylase, N-6 adenine-specific, conserved sit... [more]
gi|873226638|emb|CEM20936.1|2.908e-5744.35unnamed protein product [Vitrella brassicaformis C... [more]
gi|159485216|ref|XP_001700642.1|4.492e-5740.07predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
gi|1004143398|gb|KXZ51381.1|6.900e-5746.45hypothetical protein GPECTOR_12g343 [Gonium pector... [more]
gi|219130185|ref|XP_002185252.1|5.840e-5640.66predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|298715150|emb|CBJ27838.1|1.572e-5140.17conserved unknown protein [Ectocarpus siliculosus][more]
gi|551648195|ref|XP_005826880.1|4.639e-4737.66hypothetical protein GUITHDRAFT_113893 [Guillardia... [more]
gi|223996249|ref|XP_002287798.1|1.463e-4545.45predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1199288302|gb|OUS43444.1|5.914e-4445.50hypothetical protein BE221DRAFT_194881 [Ostreococc... [more]
gi|693498069|emb|CEF99289.1|1.791e-4348.21DNA methylase, N-6 adenine-specific, conserved sit... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8017rna8017Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications