EWM22651.1, cds7995 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|585103216|gb|EWM22651.1| (DNA methylase, N-6 adenine-specific, conserved site [Nannochloropsis gaditana]) HSP 1 Score: 763.837 bits (1971), Expect = 0.000e+0 Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0
Query: 1 MVEKQRRDRKRKRKRSSPLPSTQEAEWPRKNPKFDTPPTSGSTATPEGQAYHEHGKFSSSSALPPASDAIAPSLIGKYHVARQQLGQASASKRRLSSPRLPSLFQPSEPSINRKFKSTTSTLTARIQPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKRLMLTNVKG 371
MVEKQRRDRKRKRKRSSPLPSTQEAEWPRKNPKFDTPPTSGSTATPEGQAYHEHGKFSSSSALPPASDAIAPSLIGKYHVARQQLGQASASKRRLSSPRLPSLFQPSEPSINRKFKSTTSTLTARIQPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKRLMLTNVKG
Sbjct: 1 MVEKQRRDRKRKRKRSSPLPSTQEAEWPRKNPKFDTPPTSGSTATPEGQAYHEHGKFSSSSALPPASDAIAPSLIGKYHVARQQLGQASASKRRLSSPRLPSLFQPSEPSINRKFKSTTSTLTARIQPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKRLMLTNVKG 371
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|873226638|emb|CEM20936.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 208.764 bits (530), Expect = 2.908e-57 Identity = 110/248 (44.35%), Postives = 145/248 (58.47%), Query Frame = 0
Query: 129 KKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQ-----AAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKRLMLTNVKG 371
K+ S+P++P+ T Y DHFE+PL AY+D+ P L+ + LR+ L IYDP++C G L SLGF V ++ RDFY+DV TVP YDV+VTNPP+SD+HKE ILRF L S +P LLLPNYVA K Y+ + L + ++ F+ VP KYEY HPE TGH SSPFFSIW G + S Q Q + LV TVE+L+ RP+ K+R+KM + +G
Sbjct: 507 KRKTGSVPTFPYDTAYNDHFETPLAAYQDIAPALRHIAEGLRKTSGELRIYDPFYCTGKTKVHLHSLGFRSVIHEKRDFYSDVKNQTVPEYDVMVTNPPFSDEHKEDILRFALSSPQPCFLLLPNYVATKGYFRELRHRLDRLQRGFFAVPPLKYEYSHPENTGHASSPFFSIWFVAAGHQGTNNTTDATSLYQRWVRHLRQGGGPVGMALVWTVEELQRRHVVRDGNRPNPKKRRKMMKARCVETEG 754
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|159485216|ref|XP_001700642.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158272074|gb|EDO97880.1| predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 200.675 bits (509), Expect = 4.492e-57 Identity = 115/287 (40.07%), Postives = 150/287 (52.26%), Query Frame = 0
Query: 117 STTSTLTARIQPKKTQ-----ASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYY---LDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQ----------------------------AAQQQHSLPWRLVL--TVEDLRSTGAAPSWKRPSNKRRKKMKRLM 365
+ TST KK Q S +PF DY DHFE+ A +D++P L L L++ L IYDP+FC+G + ++ GF ++ RDFYADV +G +P YDV+VTNPPYS DHKE+ L FCL S KPW LLLPNYVA K+YY +DA PQ R PFYL P +Y Y+HPEGTGH SPF+SIW G G ++L S W + L +V+ LR A P+ KR + K+R ++K+ M
Sbjct: 122 AATSTALGNGYEKKKQKHGKRVSSDDWPFEVDYNDHFETSSAAVDDIQPVLLALCNRLKKTPAQLAIYDPFFCKGGIRRHYEARGFTNFIHRKRDFYADVESGQLPEYDVMVTNPPYSADHKERALDFCLRSGKPWALLLPNYVATKAYYSELVDAAGTPPQQR-PFYLTPITRYAYEHPEGTGHAESPFYSIWYVGLGVHTEAVYGACRTKLDSAGAAAATGAGAGGASASKGGKGAGGVGGKGAGGSGGWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKKM 407
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|1004143398|gb|KXZ51381.1| (hypothetical protein GPECTOR_12g343 [Gonium pectorale]) HSP 1 Score: 194.512 bits (493), Expect = 6.900e-57 Identity = 98/211 (46.45%), Postives = 130/211 (61.61%), Query Frame = 0
Query: 157 DLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYY----LDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 363
DL+P L L + L++ + L +YDP+FC+G + ++LGF ++ RDFY DV AG +P YD+LVTNPPYS+DHKE+IL FCL S KPW LLLPNYVA K+Y+ D P PQ +PF+L P +Y Y HPEGTGH SPF+SIW G G ++L A S L +VE LR A P+ KR + K+R ++K+
Sbjct: 17 DLQPVLTALCKKLKKRPSQLVVYDPFFCKGGIRKHYEALGFTSFVHENRDFYKDVEAGALPDYDILVTNPPYSEDHKERILDFCLRSGKPWALLLPNYVATKAYFSSLLADTATPPPQ--RPFFLTPRVRYTYDHPEGTGHAESPFYSIWYVGLGSHTEAVYGSCRAKLDAGGGGGSWDVSLARSVEALRQAKAVPTAKRLNPKQRLRLKK 225
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|219130185|ref|XP_002185252.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403431|gb|EEC43384.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 195.282 bits (495), Expect = 5.840e-56 Identity = 98/241 (40.66%), Postives = 144/241 (59.75%), Query Frame = 0
Query: 137 SYPFPTDYADHFESPLRAYEDLEPFLQWL---------RRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLG----SDKPWCLLLPNYVANKSYYLD-AIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 363
SYP+P +Y DHFE+PL AY+DL+P + WL ++ + T + IYDPY+C G ++L LG+ V ++ RDFY DV TVP YD+L+TNPPYSD HK K L +C S+KP+C+L+PNYVA++ Y+ + ++ P+D YL+P +Y+Y HPEGTG SPF S+W C G RD + + ++ ++ +L GA + KRP+ K+R+K+KR
Sbjct: 37 SYPYPVNYNDHFETPLLAYKDLQPLIDWLWSSSICRKVKQGRNAKATDISIYDPYYCDGRTRSILAELGYRNVLHEKRDFYKDVMRNTVPEYDLLLTNPPYSDQHKTKCLEYCFSQLRESNKPFCILMPNYVASRQYFRNFLMKEEPED--VVYLIPTLQYQYDHPEGTGKDKSPFDSLWFCGIG----RDRAKSAVEFWKGLGRATFCPKMAASLRELEDMGAISTQKRPNPKQRRKIKR 271
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|298715150|emb|CBJ27838.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 184.111 bits (466), Expect = 1.572e-51 Identity = 96/239 (40.17%), Postives = 144/239 (60.25%), Query Frame = 0
Query: 127 QPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYY-LDAIRPLPQ-DRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 363
+P+++ A+ +PFPT+Y DHFE+PL+AY D+E L L + L +++ L I+DPY+C G LL LGFP+V + +DFY V P +DVL+TNPPYS DHK++ L +C S KPW LL+PNYVA K YY L + P +PFY+VP KY + HPEGTGH SPF +W + G +++ + ++ ++++L TGA + +R + ++RK +K+
Sbjct: 93 RPRESLAAPHHHPFPTEYGDHFETPLQAYRDIEVALALLAKLLDKKRKHLRIWDPYYCAGRTPRLLGQLGFPKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGPAAGPGGEPFYVVPENKYYFDHPEGTGHADSPFTGVWYVHCGSHTEAVFEGTITQKRGGVS-------VLRSLDELSQTGAVTTERRLNPRQRKALKK 324
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|551648195|ref|XP_005826880.1| (hypothetical protein GUITHDRAFT_113893 [Guillardia theta CCMP2712] >gi|428170980|gb|EKX39900.1| hypothetical protein GUITHDRAFT_113893 [Guillardia theta CCMP2712]) HSP 1 Score: 174.481 bits (441), Expect = 4.639e-47 Identity = 90/239 (37.66%), Postives = 134/239 (56.07%), Query Frame = 0
Query: 128 PKKTQ--ASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPS-YDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAKYEYQHPEGTGHISSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 363
PK T+ +S+ ++PFPT+Y DHFE+ A D+ P LQ + ++ +SL IYDPY+C GAV+ + GF V N D Y + T S +D++VTNPP+S DHK+K L C+ ++ W +LLP Y A K+Y+ + + + + FY +P +Y+++HPEGTGH SPFFSIW G R P +L TVEDL + A + KR + ++R +K+
Sbjct: 172 PKGTEPTSSIHNHPFPTEYGDHFETSKVAIHDIAPILQQFAKVSGKQASSLAIYDPYYCDGAVIEHFRQEGFHNVHNLNVDCYQVWKSATTSSDFDIVVTNPPFSGDHKQKCLEHCVKREQAWMVLLPAYCATKNYFQELMSNWKERGKVFYGIPKVRYDFEHPEGTGHAVSPFFSIWFVYLGKHTEEIFSWYKKRYGDEG-----PLKLARTVEDLAANKAVDNRKRLNPRQRAALKK 405
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|223996249|ref|XP_002287798.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976914|gb|EED95241.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 166.007 bits (419), Expect = 1.463e-45 Identity = 85/187 (45.45%), Postives = 116/187 (62.03%), Query Frame = 0
Query: 138 YPFPTDYADHFESPLRAYEDLEPFLQW-LRRALRR--EKTSLHIYDPYFCRGAVVNLLK------SLGFPRVTN-----KMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCL----GSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAK--YEYQHPEGTGHISSPFFSIWVC 304
YP+PTDY DHFE+P RAYED+ P + + L++ ++R ++ + IYDPYFC G LL + G R TN + RDFY DV P YD+LVTNPPYS DHKE+ L + + + +P+ LL+PNYVA+K Y+ + L + Q ++ P +K YEY HPEGTGH +SPF S+W C
Sbjct: 58 YPYPTDYNDHFETPQRAYEDILPIIGYVLKKKIKRYNSQSDVTIYDPYFCTGRAATLLNATFEQHTTGNKRHTNIRIQHEKRDFYQDVRQNNTPQYDILVTNPPYSGDHKERCLEYVVDQLKNNQRPFFLLMPNYVASKEYFRKIV--LEEKIQIVFITPSSKHPYEYDHPEGTGHETSPFASVWFC 242
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|1199288302|gb|OUS43444.1| (hypothetical protein BE221DRAFT_194881 [Ostreococcus tauri]) HSP 1 Score: 164.466 bits (415), Expect = 5.914e-44 Identity = 86/189 (45.50%), Postives = 116/189 (61.38%), Query Frame = 0
Query: 122 LTARIQPKKTQASLPSYPF-PTDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAK--YEYQHP----EGT-GHISSPFFSIW 302
L+ + + T AS F D ADH E+P RAY D+EPFL + +AL+REK L IYDPY+C G++V L++LGF V N+ DFY VA T P +DVLVTNPPYS DH ++IL FC S+KPW LLLPN+V KSYY + + + +P +L+P + Y Y P +G ++PF + W
Sbjct: 66 LSVKTSGRVTPASKGGLAFGDVDEADHCETPFRAYRDVEPFLFAIAKALKREKKDLRIYDPYYCEGSMVEHLRALGFESVYNRNEDFYEKVATKTTPDFDVLVTNPPYSGDHFKRILTFCRDSNKPWLLLLPNFVCRKSYYEECV---GERAKPLFLIPDSTKPYRYWAPGRNEDGVRAKGTTPFETFW 251
BLAST of EWM22651.1 vs. NCBI_GenBank
Match: gi|693498069|emb|CEF99289.1| (DNA methylase, N-6 adenine-specific, conserved site [Ostreococcus tauri]) HSP 1 Score: 162.925 bits (411), Expect = 1.791e-43 Identity = 81/168 (48.21%), Postives = 108/168 (64.29%), Query Frame = 0
Query: 142 TDYADHFESPLRAYEDLEPFLQWLRRALRREKTSLHIYDPYFCRGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDDHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAIRPLPQDRQPFYLVPHAK--YEYQHP----EGT-GHISSPFFSIW 302
D ADH E+P RAY D+EPFL + +AL+REK L IYDPY+C G++V L++LGF V N+ DFY VA T P +DVLVTNPPYS DH ++IL FC S+KPW LLLPN+V KSYY + + + +P +L+P + Y Y P +G ++PF + W
Sbjct: 87 VDEADHCETPFRAYRDVEPFLFAIAKALKREKKDLRIYDPYYCEGSMVEHLRALGFESVYNRNEDFYEKVATKTTPDFDVLVTNPPYSGDHFKRILTFCRDSNKPWLLLLPNFVCRKSYYEECV---GERAKPLFLIPDSTKPYRYWAPGRNEDGVRAKGTTPFETFW 251 The following BLAST results are available for this feature:
BLAST of EWM22651.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|