EWM22700.1, cds7971 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|585103269|gb|EWM22700.1| (atp-binding cassette sub-family b member 5 [Nannochloropsis gaditana]) HSP 1 Score: 214.157 bits (544), Expect = 2.107e-70 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVEPRRAQAVKEPERI 107
MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVEPRRAQAVKEPERI
Sbjct: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVEPRRAQAVKEPERI 107
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|732746541|gb|KHJ76845.1| (hypothetical protein OESDEN_23535, partial [Oesophagostomum dentatum]) HSP 1 Score: 111.694 bits (278), Expect = 1.130e-29 Identity = 52/97 (53.61%), Postives = 73/97 (75.26%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVEPRR 97
+R P++LLLDE +SALD S+++VQAAL++A+ GRTT+IIAHRLSTI++ D II +K+G VVE GTH ELL K+G+Y QTF +V+ ++
Sbjct: 23 VRDPKILLLDEATSALDAESESVVQAALDKASIGRTTIIIAHRLSTIKNADKIIAMKAGEVVEFGTHGELLEKKGLYYDLVNAQTFTDAVDNVDGKK 119
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|732891320|gb|KHJ94299.1| (ABC transporter, ATP-binding protein [Oesophagostomum dentatum]) HSP 1 Score: 114.775 bits (286), Expect = 2.440e-29 Identity = 55/105 (52.38%), Postives = 77/105 (73.33%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVEPRRAQAVKEPE 105
+R P++LLLDE +SALD S+++VQAAL++A+ GRTT+IIAHRLSTI++ D II +K+G VVE GTH ELL K+G+Y QTF +V+ +A+ VK+
Sbjct: 41 VRDPKILLLDEATSALDAESESVVQAALDKASVGRTTIIIAHRLSTIKNADKIIAMKAGEVVEFGTHDELLEKKGLYYDLVNAQTFTDAVDNVDEIKAEGVKKTN 145
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|928153077|ref|XP_013974355.1| (PREDICTED: LOW QUALITY PROTEIN: ATP-binding cassette sub-family B member 5 [Canis lupus familiaris]) HSP 1 Score: 114.005 bits (284), Expect = 3.401e-27 Identity = 51/94 (54.26%), Postives = 75/94 (79.79%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVE 94
+RKP++L+LDE +SALD S+++VQAALE+A++GRTT++IAHRLSTI+S D I+ +K G VVE+GTHAEL+AK+G+Y + Q + + +E
Sbjct: 95 VRKPKILILDEATSALDTESESVVQAALEKASKGRTTIVIAHRLSTIQSADLIVTIKDGMVVEKGTHAELMAKQGLYYSLAMTQDIKKADEQIE 188 HSP 2 Score: 92.4337 bits (228), Expect = 1.076e-19 Identity = 41/77 (53.25%), Postives = 60/77 (77.92%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVY 77
+RKP++LLLDE +SALD S+ +VQ AL++A +G+T L++AHRLSTI++ D I+VL +G + E+GTH ELL +Y
Sbjct: 726 LRKPKILLLDEATSALDNESEKVVQHALDKARKGKTCLVVAHRLSTIQNADLIVVLHNGKIKEQGTHQELLRNRDMY 802
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|507646025|ref|XP_004702768.1| (PREDICTED: ATP-binding cassette sub-family B member 5 [Echinops telfairi]) HSP 1 Score: 112.464 bits (280), Expect = 1.054e-26 Identity = 49/95 (51.58%), Postives = 75/95 (78.95%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVEP 95
+R P++L+LDE +SALD S+++VQAALE+A++GRTT+++AHRLST+ + D I+ +K G VVE+GTHA+L+AKEG+Y + Q + +D+EP
Sbjct: 540 VRNPKILILDEATSALDTESESVVQAALEKASKGRTTIVVAHRLSTVRNADLIVAMKDGRVVEKGTHADLMAKEGLYYSLAMSQDIKKVDEDMEP 634 HSP 2 Score: 88.9669 bits (219), Expect = 2.093e-18 Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVY 77
+RKP++LLLDE +SALD + VQ ALE A GRT L++AHRLSTI++ D I+VL G V E+GTH ELL +Y
Sbjct: 1175 LRKPKILLLDEATSALDNECEKAVQQALEEARRGRTCLMVAHRLSTIQNADLIVVLHDGKVKEQGTHQELLRNRDIY 1251
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|1072244907|ref|XP_018431832.1| (PREDICTED: ATP-binding cassette sub-family B member 5 isoform X1 [Nanorana parkeri]) HSP 1 Score: 111.694 bits (278), Expect = 1.979e-26 Identity = 54/103 (52.43%), Postives = 75/103 (72.82%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVEPRRAQAVKE 103
+R P++LLLDE +SALD S+A+VQAAL++A+EGRTT++IAHRLST+ + D I+VL++GAV E GTH+EL+AK+G+Y + Q VE AQ E
Sbjct: 512 VRNPKILLLDEATSALDMQSEAVVQAALDKASEGRTTIVIAHRLSTVWTADLIVVLENGAVAENGTHSELMAKKGIYYSLATAQAIQTT---VESETAQGTLE 611 HSP 2 Score: 93.2041 bits (230), Expect = 5.741e-20 Identity = 42/85 (49.41%), Postives = 63/85 (74.12%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQT 85
+R P++LLLDE +SALD S+ +VQ AL++A +GRT ++IAHRLST+++ D I+V+K+G ++E GTH +LL+ G Y QT
Sbjct: 1146 IRAPKLLLLDEATSALDNESEKVVQQALDQARKGRTCIMIAHRLSTVQNADLIVVMKNGRIIEYGTHQQLLSNRGAYYDLVHAQT 1230
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|759096592|ref|XP_011362782.1| (PREDICTED: ATP-binding cassette sub-family B member 5 [Pteropus vampyrus]) HSP 1 Score: 110.923 bits (276), Expect = 4.177e-26 Identity = 49/85 (57.65%), Postives = 70/85 (82.35%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQT 85
+R P++L+LDE +SALD S+++VQAALE+A++GRTT+++AHRLSTI S D I+ +K G VVE+GTHAEL+AK+G+Y + QT
Sbjct: 541 VRNPKILILDEATSALDTESESVVQAALEKASKGRTTIVVAHRLSTIRSADLIVTIKDGVVVEKGTHAELMAKQGLYYSLAMSQT 625 HSP 2 Score: 90.5077 bits (223), Expect = 5.628e-19 Identity = 43/77 (55.84%), Postives = 57/77 (74.03%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVY 77
+RKP++LLLDE +SALD S+ +VQ AL A +GRT L++AHRLSTI++ D I+VL +G + E GTH ELL VY
Sbjct: 1125 LRKPKILLLDEATSALDNESEKVVQHALNTARKGRTCLVVAHRLSTIQNADLIVVLHNGKIKEWGTHQELLRNRNVY 1201
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|1062906589|ref|XP_017950082.1| (PREDICTED: ATP-binding cassette sub-family B member 5 isoform X7 [Xenopus tropicalis]) HSP 1 Score: 110.538 bits (275), Expect = 5.868e-26 Identity = 50/104 (48.08%), Postives = 77/104 (74.04%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTF-MQPPKDVEPRRAQAVKE 103
+R P++LLLDE +SALD S+AIVQAAL++A++GRTT+++AHRLSTI + D+I+V ++GAV E+GTH+EL+ K G+Y + QT + K++ + + E
Sbjct: 488 VRNPKILLLDEATSALDTGSEAIVQAALDKASKGRTTIVVAHRLSTIWTADAIVVFENGAVAEQGTHSELMEKRGIYFSLATAQTVQLSEDKEITETKQNGIHE 591 HSP 2 Score: 93.2041 bits (230), Expect = 6.322e-20 Identity = 39/77 (50.65%), Postives = 59/77 (76.62%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVY 77
+R P++LLLDE +SALD S+ +VQ AL++A +GRT ++IAHRL+T+++ D I+V+ G ++E G+H ELL K G Y
Sbjct: 1124 IRAPKILLLDEATSALDNESEKVVQQALDQARKGRTCILIAHRLTTVQNADIIVVMNKGKIIEHGSHQELLGKHGAY 1200
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|301607480|ref|XP_002933334.1| (PREDICTED: ATP-binding cassette sub-family B member 5 isoform X1 [Xenopus tropicalis] >gi|1043418516|gb|OCA31147.1| hypothetical protein XENTR_v90016034mg [Xenopus tropicalis]) HSP 1 Score: 110.538 bits (275), Expect = 6.052e-26 Identity = 50/104 (48.08%), Postives = 77/104 (74.04%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTF-MQPPKDVEPRRAQAVKE 103
+R P++LLLDE +SALD S+AIVQAAL++A++GRTT+++AHRLSTI + D+I+V ++GAV E+GTH+EL+ K G+Y + QT + K++ + + E
Sbjct: 543 VRNPKILLLDEATSALDTGSEAIVQAALDKASKGRTTIVVAHRLSTIWTADAIVVFENGAVAEQGTHSELMEKRGIYFSLATAQTVQLSEDKEITETKQNGIHE 646 HSP 2 Score: 93.2041 bits (230), Expect = 6.459e-20 Identity = 39/77 (50.65%), Postives = 59/77 (76.62%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVY 77
+R P++LLLDE +SALD S+ +VQ AL++A +GRT ++IAHRL+T+++ D I+V+ G ++E G+H ELL K G Y
Sbjct: 1179 IRAPKILLLDEATSALDNESEKVVQQALDQARKGRTCILIAHRLTTVQNADIIVVMNKGKIIEHGSHQELLGKHGAY 1255
BLAST of EWM22700.1 vs. NCBI_GenBank
Match: gi|1191910860|ref|XP_020919086.1| (ATP-binding cassette sub-family B member 5 isoform X8 [Sus scrofa]) HSP 1 Score: 110.153 bits (274), Expect = 7.910e-26 Identity = 51/94 (54.26%), Postives = 72/94 (76.60%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVYAAFRAQQTFMQPPKDVE 94
+R P++L+LDE +SALD S+++VQAALE+A++GRTT++IAHRLSTI S D I+ LK G VVE+GTHAEL+AK+G Y + Q + + +E
Sbjct: 431 IRNPKILILDEATSALDTESESVVQAALEKASKGRTTIVIAHRLSTIRSADMIVTLKDGMVVEKGTHAELMAKQGPYYSLAISQDIKKADEQME 524 HSP 2 Score: 95.9005 bits (237), Expect = 8.279e-21 Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = 0
Query: 1 MRKPEVLLLDEPSSALDQSSQAIVQAALERAAEGRTTLIIAHRLSTIESCDSIIVLKSGAVVERGTHAELLAKEGVY 77
+RKP++LLLDE +SALD S+ +VQ AL++A++GRT L++AHRLSTI++ D I+VL +G + E+GTH ELL +Y
Sbjct: 1061 LRKPKILLLDEATSALDNESEKVVQHALDKASKGRTCLMVAHRLSTIQNADLIVVLHNGKIKEQGTHQELLKNRDIY 1137 The following BLAST results are available for this feature:
BLAST of EWM22700.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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