EWM22704.1, cds7970 (CDS) Nannochloropsis gaditana

Overview
NameEWM22704.1
Unique Namecds7970
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:302337..302445 +
Alignment locationKK037247.1:302636..303184 +
Alignment locationKK037247.1:303330..303439 +
Alignment locationKK037247.1:303518..303761 +
Alignment locationKK037247.1:303956..304123 +
Alignment locationKK037247.1:304225..304430 +
Alignment locationKK037247.1:304630..304994 +

Link to JBrowse

Properties
Property NameValue
End range.
End range304994
Protein idEWM22704.1
Productatp-binding cassette sub-family b member 9
Partialtrue
Orig transcript idgnl|cribi|Naga_100844g1.6821.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:302337..302445 +
KK037247.1supercontigKK037247.1:302636..303184 +
KK037247.1supercontigKK037247.1:303330..303439 +
KK037247.1supercontigKK037247.1:303518..303761 +
KK037247.1supercontigKK037247.1:303956..304123 +
KK037247.1supercontigKK037247.1:304225..304430 +
KK037247.1supercontigKK037247.1:304630..304994 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005215transporter activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR011527ABC1_TM_dom
IPR027417P-loop_NTPase
Homology
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|585103275|gb|EWM22704.1| (atp-binding cassette sub-family b member 9, partial [Nannochloropsis gaditana])

HSP 1 Score: 1170.61 bits (3027), Expect = 0.000e+0
Identity = 583/583 (100.00%), Postives = 583/583 (100.00%), Query Frame = 0
Query:    1 MRASSPLVVLLMVALAALAKASVFGGRKRRGTPGGSAFCYTTPLNRGFFHRPYILRPSGLYKSNDDDASTFSVPDASPTPQSSSPSLSPSSSSSSSTAIFPYVRVEEAAHPLLHRSLPRSFAFFLQRARAIFFPSPCTPSSSPSSRLTPATSPPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSIFLGALGGREGRREGRR 583
            MRASSPLVVLLMVALAALAKASVFGGRKRRGTPGGSAFCYTTPLNRGFFHRPYILRPSGLYKSNDDDASTFSVPDASPTPQSSSPSLSPSSSSSSSTAIFPYVRVEEAAHPLLHRSLPRSFAFFLQRARAIFFPSPCTPSSSPSSRLTPATSPPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSIFLGALGGREGRREGRR
Sbjct:    1 MRASSPLVVLLMVALAALAKASVFGGRKRRGTPGGSAFCYTTPLNRGFFHRPYILRPSGLYKSNDDDASTFSVPDASPTPQSSSPSLSPSSSSSSSTAIFPYVRVEEAAHPLLHRSLPRSFAFFLQRARAIFFPSPCTPSSSPSSRLTPATSPPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSIFLGALGGREGRREGRR 583          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|553193843|ref|XP_005855842.1| (hypothetical protein NGA_0569300 [Nannochloropsis gaditana CCMP526] >gi|422293215|gb|EKU20515.1| hypothetical protein NGA_0569300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 349.362 bits (895), Expect = 1.497e-111
Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0
Query:   46 RGFFHRPYILRPSGLYKSNDDDASTFSVPDASPTPQSSSPSLSPSSSSSSSTAIFPYVRVEEAAHPLLHRSLPRSFAFFLQRARAIFFPSPCTPSSSPSSRLTPATSPPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELG 220
            RGFFHRPYILRPSGLYKSNDDDASTFSVPDASPTPQSSSPSLSPSSSSSSSTAIFPYVRVEEAAHPLLHRSLPRSFAFFLQ ARAIFFPSPCTPSSSPSSRLTPATSPPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELG
Sbjct:  202 RGFFHRPYILRPSGLYKSNDDDASTFSVPDASPTPQSSSPSLSPSSSSSSSTAIFPYVRVEEAAHPLLHRSLPRSFAFFLQWARAIFFPSPCTPSSSPSSRLTPATSPPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELG 376          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|298714212|emb|CBJ27348.1| (ATP-binding cassette, sub-family B, member 8 precursor [Ectocarpus siliculosus])

HSP 1 Score: 307.76 bits (787), Expect = 1.382e-92
Identity = 199/500 (39.80%), Postives = 279/500 (55.80%), Query Frame = 0
Query:  116 SLPRSFAFFLQRARAIFFPSPCTPSSSPSSRLTPATSPPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVK------------------------------PLS-------------PSPSLPTSAPSSRATSSPSSSS-ERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSIFLGA 571
            S+ RSF  F +     F           SSR   A +P  A W  +  + R +  +L  S +TL+LAA+ E+AVPH+SS+AL+A      + EF R++Q +    +LA++ TG+RG CF LAGT +V ++R  L  SLL+QDI+F D  ++G LT+RL +D  KISNVVS +VNIL RQ IQ +GGL YL+ L  ++A +   G+ ++  +T A+GR++R+++ ++Q  LA + +VA  SLSLIR+VR H  E  E  RY   +  ++   E     YG  R+ +  +Q  LL AVL +G      G M+  QLT+ +FY QFV +ASFDV DQ   IQEALG+  +VF LLDR P M+ +                              PL+             PSP L       +ATS+ + S  +R    V F +VSF YP R    +L  L L + PG++VAVVG+SGGGKST+LRL+ R YD   GSI LG 
Sbjct:    6 SIWRSFGSFRRHVGETFL----------SSR-EKAKAPRDA-WRYMGTLVRSQRGVLLASIVTLVLAAACEIAVPHYSSRALNAAAFANDRVEFARSLQGMVAYSLLASVFTGLRGACFWLAGTHVVAKVRFDLLSSLLKQDISFHDSNETGALTSRLASDTAKISNVVSFHVNILCRQVIQAVGGLGYLYMLERQLACVALVGLVLVGGITTAYGRFSRRISAKVQTALAEAGSVAEQSLSLIRVVRAHANEQHERRRYGGKIGNSVELQETQGIAYGVARVVIGWSQAILLGAVLLLGAGRVFDGRMTGQQLTTFVFYTQFVTSASFDVGDQ---IQEALGAGQKVFELLDREPIMTGQAKTEGKQSVEHSSSSTLTQHDSTVMEEHAPPLTNSVGSKGGGDADMPSPHLQ---QQQQATSAHAGSERQRQRGRVEFDSVSFGYPTRSGVLVLDGLNLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGG 487          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|1210525052|dbj|GAX16244.1| (hypothetical protein FisN_3Hh274 [Fistulifera solaris])

HSP 1 Score: 238.424 bits (607), Expect = 1.050e-66
Identity = 149/429 (34.73%), Postives = 233/429 (54.31%), Query Frame = 0
Query:  158 W-PRLREICRPEYPLLTLSTLT----------LLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELGV---LAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGAS-----VVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSI 567
            W  RLRE+      L+TL+  T          L+L A +   +PHF ++ +S +          + ++ +  LG+   L A  TG+RG  F +AGTR+   +R  L ++LL Q+ AF+D  ++G L +RL  D  KI NVVS +VN++ RQ  Q + G +YL ++  R+AL   GG+A++  ++  +G++NR +++++QD+ A   AVA TS S+   +R   G + E E+Y+ A  K L   E   +GYG ++      Q GL T +L   W+   +G +   QLT+ LFY  FV+ +S +V DQ+++IQ A G++T VF L+ R PA+               P +R T S +S    +GA+     V   +V+  Y     +P L+ + L I  G RVA+VG SG GKS++LR + R YD D G I
Sbjct:   30 WRDRLRELDEQRRNLVTLADYTASIVVPSFSFLILGAFMMSVIPHFEARCVSLVATMDPSRP--KLIKALMGLGISTTLCAYFTGMRGTLFWIAGTRVNYNVRVKLHRNLLLQEAAFYDSNETGYLLSRLNNDVNKIGNVVSYHVNVVFRQLAQFIFGSIYLLKIAPRLALYAFGGIALVGWISMIYGKFNRYLSQKVQDSFADGTAVAETSFSMSETIRAFDGVAVESEKYENAQHKALELEEVQAWGYGTHKFISDGLQYGLKTLLLFACWRAGLNGNLPASQLTAFLFYTDFVLESSNEVGDQWAKIQGAFGASTSVFELIRRIPAVR------------DPPRARGTDSAASGLLVNGATASKPIVTLDDVTLKYEAM-ESPALTHVNLGIHAGDRVAIVGRSGSGKSSVLRSILRFYDPDEGKI 443          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|676393857|ref|XP_009040206.1| (hypothetical protein AURANDRAFT_10595, partial [Aureococcus anophagefferens] >gi|323449188|gb|EGB05078.1| hypothetical protein AURANDRAFT_10595, partial [Aureococcus anophagefferens])

HSP 1 Score: 234.572 bits (597), Expect = 1.483e-66
Identity = 138/341 (40.47%), Postives = 200/341 (58.65%), Query Frame = 0
Query:  229 VRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSIFL 569
            +RG  F LAG R+V RLR  +F ++L+QD+ +FD T +G L +RL++D  ++++VVS N+NIL RQ+IQ LGG+ YL  L  R+A LT   M +  +    +GR +R+ A++ QD LA+S A+A  SL  +R+ R+   E    ERY  A+         H   YG  RLA+  A+     A L  G Q    GAM+ DQL + LFY  +V NA+FDV DQ+++++EALG+  + F L  R P  +     PS  +  +AP       P + +   GA V F +VSF+YP RP   +L  + L + PG++VA+VG SG GKSTL RL  R Y+  +G + L
Sbjct:    1 LRGGLFWLAGVRVVSRLRVRMFSAMLRQDLGWFDETSTGSLNSRLSSDATRVADVVSFNLNILARQSIQALGGVAYLCYLDGRLAALTVAFMGLASVFADVYGRASRRFAKDTQDRLAASAAIADESLRNVRVARSLAAEPRLAERYASAVDGVTRVQTRHGLWYGVSRLALGSAKGASSVATLAYGAQRVAVGAMTGDQLVTFLFYAAYVSNAAFDVGDQWAKVEEALGAGAEAFKLAYRAPTWT-GAAPPSSLVDDAAP-------PKARNPARGA-VAFDDVSFSYPARPDEAVLRGVSLAVRPGEKVALVGESGSGKSTLARLALRQYEASSGVVSL 332          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|971505886|dbj|GAQ92320.1| (ABC transporter B family [Klebsormidium nitens])

HSP 1 Score: 239.195 bits (609), Expect = 1.206e-65
Identity = 141/409 (34.47%), Postives = 227/409 (55.50%), Query Frame = 0
Query:  164 ICR--PEYPLLTLSTLTLLLAASV-EVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSIFL 569
            +CR   E P++ L  L  L+ AS+ E+A+PHF +  + A   Q  + +F    + +  + V   L +G+RG+CF +A  +++ R+R AL+K++++Q++++FD+T  G+LT+RL  DC  ++ V+ +NVN++LR A+Q++GG+ YL  L   +++ TA     +  V    GRY +  A  +QDTLA +N VA  S SL ++VRT   E  E  RY +   + +N  +     YG       +    L+   L  G     +G +S   LT+ + YV+ V +A++ V DQ++ + EALGS+ +VF ++D  PA  +  ++P   LP                      + F  + F YP RPHTP+L+ + L + PGQ VA VG SG GKSTL+ LL RHYD   G + +
Sbjct:  249 VCRLVAERPVMPLCALCFLVLASLSELAIPHFITSTIFAA-SQNNRPQFLANARFLCVMAVSFGLFSGLRGVCFAVANQQLILRMRTALYKTIIRQEVSYFDQTAVGDLTSRLGNDCQAVAKVLGINVNVMLRNALQVVGGMAYLVSLSRFLSVTTAVVCVAMGGVMFVAGRYQQVAARVVQDTLAKANEVAEESFSLAKMVRTFGTEMQEAARYRRQAQEIVNLNKRQAAVYGISACLTNMLYYFLVVFALYFGGGHVMAGGISGQDLTTFVLYVEMVGSAAYMVVDQWASLMEALGSSAEVFKMIDMPPANQL--VTPGRVLPALR-----------------GHIEFRGLHFRYPARPHTPVLTDINLTVQPGQLVAFVGLSGSGKSTLIHLLQRHYDPSEGRVLV 637          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|168058698|ref|XP_001781344.1| (ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 [Physcomitrella patens] >gi|162667237|gb|EDQ53872.1| ATP-binding cassette transporter, subfamily B, member 6, group TAP protein PpABCB6 [Physcomitrella patens])

HSP 1 Score: 231.106 bits (588), Expect = 1.508e-64
Identity = 137/409 (33.50%), Postives = 227/409 (55.50%), Query Frame = 0
Query:  160 RLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQT-EFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSI 567
            RL  +  P+  ++ L+   L++AA  E+ +PHF +  + +   QKG T +F+   + +  +     L +G+RG CFG+A   +V R+R  LF +LL QDIAFFD    G LT+RL +DC ++S ++  ++NI+ R  +Q LG  +YL  L  ++AL T G  ++++ +T  +GRY ++ +   QD +AS+N VA  + SL+R+VRT   E  E  RY + L K +      +  Y    L+      G     L +G     SG +S ++LT  + Y ++V+++++ V D ++ + +A+G++ +VF LLD  P++ +   +P  +LP                      V F ++SF+YP RP  P+L ++ L I  G+ VAVVG SG GKSTL+ LL R Y+  +G +
Sbjct:    3 RLWVLISPDKLIIGLAFAALVIAALSEITIPHFVAAMIFS--AQKGMTSDFYGNAKLLVLMSCTYGLFSGIRGGCFGIANQILVKRMRELLFSTLLSQDIAFFDAESVGALTSRLGSDCQQVSRIIGNDLNIMFRNGLQGLGAFMYLVTLSWQLALTTLGVCSLMWFLTTIYGRYQKRTSRFAQDLIASANEVAEEAFSLLRVVRTFGTEQQE-SRYSKWLQKLMEINLRQNIAYAFSTLSSCTLYHGTQVVALIIGGGFVMSGQISAEKLTKFILYSEWVVHSTWWVGDHWASLMQAIGASEKVFQLLDLPPSLQLT--APGITLPNVQ-----------------GCVQFVDISFSYPTRPKVPVLQNVNLTINSGELVAVVGLSGSGKSTLVSLLLRLYEPSSGQV 389          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|168057566|ref|XP_001780785.1| (ATP-binding cassette transporter, subfamily B, member 5, group TAP protein PpABCB5 [Physcomitrella patens] >gi|162667803|gb|EDQ54424.1| ATP-binding cassette transporter, subfamily B, member 5, group TAP protein PpABCB5 [Physcomitrella patens])

HSP 1 Score: 230.72 bits (587), Expect = 2.235e-64
Identity = 141/410 (34.39%), Postives = 230/410 (56.10%), Query Frame = 0
Query:  160 RLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQT-EFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRL-AVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSI 567
            RL  +  P+  ++  +   L++AA  E+ +PHF +  + +   QKG T +F+   + +  +     L +G+RG CFG+A   +V R+R  LF +L+ QDI FFD    G LT+RL +DC ++S ++  ++NI+ R  +Q LG  +YL  L  ++AL T G  ++++ +T  +GRY ++ A   QD++AS+N VA  +LSL+R+VRT   E  E+ RY   L K +      +  YG   L +  L  T  + A L +G     SGA+S ++LT  + Y ++V+++++ V D ++ + +A+G++ +VF LL+         L P P L     SS     P          + F ++SF+YP RP   +L ++ L+I PG+ VAVVG SG GKSTL+ LL R Y+   G +
Sbjct:    3 RLWVLVSPDKLIIGFAFTALVIAALSEITIPHFVAAMIFS--AQKGMTNDFYNNARLLVMMSCTYGLFSGIRGGCFGIANQILVKRMRELLFSTLVSQDIVFFDTEAVGSLTSRLGSDCQQVSRIIGNDLNIMFRNGLQGLGAFVYLLTLSWQLALTTLGVCSLMWFLTRIYGRYQKRTARFAQDSIASANEVAEEALSLLRVVRTFGTEKEEVYRYSNWLKKLMEINLRQNIAYGFSTLSSCTLYHTTQVVA-LIIGGGFVMSGAISAEKLTKFILYSEWVVHSTWWVGDHWASLMQAIGASEKVFQLLE---------LPPCPQL-----SSVGIVLPQVRGR-----IQFVDISFSYPTRPQAHVLKNVNLDIKPGEIVAVVGLSGSGKSTLVSLLLRLYEPTNGQV 390          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|341886337|gb|EGT42272.1| (hypothetical protein CAEBREN_28239 [Caenorhabditis brenneri])

HSP 1 Score: 234.187 bits (596), Expect = 2.808e-64
Identity = 139/440 (31.59%), Postives = 226/440 (51.36%), Query Frame = 0
Query:  135 SPCTPSSSPSSRLTPATS-------PPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSI 567
            S  T   + +S +   TS       P   +  RL   C  ++P        L + A   V +P +++Q ++ I+ Q+G   F  ++  +  L   ++   G+RG CF  A   +  R+R  LF SL++QDI+FFD TK+GE  +RLT+DC  IS+ VS NVN+ +R  + L+G L Y+  +  R+A++T   +  +  +T  + ++  K++E++Q T+A SN +A   LS +R VR+   E  E +RY+  L  TL+        Y  Y          +L AVL+ G  L  SG M  ++L + L Y   +    +++S   S + EA+G++ +VF L++R P   +   S  P +                      ++ FS+V FTYP RP+ P+L  L LNI  G+ VA+VG SGGGKS+++ L+   Y+   GS+
Sbjct:  156 SEVTTDQASTSNVESGTSTSTAPRLPLYKVLIRLFSYCGHQWPWFLAGFFFLNVYAVARVFIPSYTAQVINDIVNQRGFDVFLHSILVLCILTATSSFFGGLRGGCFDYATALVTLRIRLDLFTSLIKQDISFFDTTKTGETMSRLTSDCQTISSTVSTNVNVFMRNGVMLIGALAYMFAMSWRLAMVTFIAVPFVAFITKVYSKFYDKISEKLQQTIADSNQMAEEVLSTMRTVRSFACEKREQKRYEGLLSSTLSVNRKRALAYMGYTWNNEFCDNAILIAVLSYGGHLVLSGKMGKEELITFLLYQMQLGENLYNLSYVMSGLMEAVGASRKVFDLMNREPQFELDG-SKKPHV--------------------NGNITFSHVGFTYPSRPNNPVLKDLTLNIKAGETVALVGPSGGGKSSIVSLIEHFYEPTEGSV 574          
BLAST of EWM22704.1 vs. NCBI_GenBank
Match: gi|341899696|gb|EGT55631.1| (CBN-HAF-2 protein [Caenorhabditis brenneri])

HSP 1 Score: 234.187 bits (596), Expect = 2.924e-64
Identity = 140/445 (31.46%), Postives = 228/445 (51.24%), Query Frame = 0
Query:  135 SPCTPSSSPSSRLTPATS-------PPPAIWPRLREICRPEYPLLTLSTLTLLLAASVEVAVPHFSSQALSAILQQKGQTEFFRAVQRVFELGVLAALSTGVRGLCFGLAGTRIVCRLRHALFKSLLQQDIAFFDRTKSGELTNRLTADCVKISNVVSLNVNILLRQAIQLLGGLLYLHRLHARIALLTAGGMAVIFLVTGAHGRYNRKMAEEIQDTLASSNAVAGTSLSLIRLVRTHVGESTELERYDQALCKTLNNMEAHDFGYGAYRLAVRLAQTGLLTAVLTVGWQLTCSGAMSMDQLTSALFYVQFVMNASFDVSDQYSRIQEALGSATQVFALLDRTPAMSVKPLSPSPSLPTSAPSSRATSSPSSSSERHGASVVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSIFLGAL 572
            S  T   + +S +   TS       P   +  RL   C  ++P        L + A   V +P +++Q ++ I+ Q+G   F  ++  +  L   ++   G+RG CF  A   +  R+R  LF SL++QDI+FFD TK+GE  +RLT+DC  IS+ VS NVN+ +R  + L+G L Y+  +  R+A++T   +  +  +T  + ++  K++E++Q T+A SN +A   LS +R VR+   E  E +RY+  L  TL+        Y  Y          +L AVL+ G  L  SG M  ++L + L Y   +    +++S   S + EA+G++ +VF L++R P   +   S  P +                      ++ FS+V FTYP RP+ P+L  L LNI  G+ VA+VG SGGGKS+++ L+   Y+   GS+ L  +
Sbjct:  156 SEVTTDQASTSNVEIGTSTSTAPRLPLYKVLIRLFSYCGHQWPWFLAGFFFLNVYAVARVFIPSYTAQVINDIVNQRGFDVFLHSILVLCILTATSSFFGGLRGGCFDYATALVTLRIRLDLFTSLIKQDISFFDTTKTGETMSRLTSDCQTISSTVSTNVNVFMRNGVMLIGALAYMFAMSWRLAMVTFIAVPFVAFITKVYSKFYDKISEKLQQTIADSNQMAEEVLSTMRTVRSFACEKREQKRYEGLLSSTLSVNRKRALAYMGYTWNNEFCDNAILIAVLSYGGHLVLSGKMGKEELITFLLYQMQLGENLYNLSYVMSGLMEAVGASRKVFDLMNREPQFELDG-SKKPHV--------------------NGNITFSHVGFTYPSRPNNPVLKDLTLNIKAGETVALVGPSGGGKSSIVSLIEHFYEPTEGSVTLDGV 579          
The following BLAST results are available for this feature:
BLAST of EWM22704.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103275|gb|EWM22704.1|0.000e+0100.00atp-binding cassette sub-family b member 9, partia... [more]
gi|553193843|ref|XP_005855842.1|1.497e-11199.43hypothetical protein NGA_0569300 [Nannochloropsis ... [more]
gi|298714212|emb|CBJ27348.1|1.382e-9239.80ATP-binding cassette, sub-family B, member 8 precu... [more]
gi|1210525052|dbj|GAX16244.1|1.050e-6634.73hypothetical protein FisN_3Hh274 [Fistulifera sola... [more]
gi|676393857|ref|XP_009040206.1|1.483e-6640.47hypothetical protein AURANDRAFT_10595, partial [Au... [more]
gi|971505886|dbj|GAQ92320.1|1.206e-6534.47ABC transporter B family [Klebsormidium nitens][more]
gi|168058698|ref|XP_001781344.1|1.508e-6433.50ATP-binding cassette transporter, subfamily B, mem... [more]
gi|168057566|ref|XP_001780785.1|2.235e-6434.39ATP-binding cassette transporter, subfamily B, mem... [more]
gi|341886337|gb|EGT42272.1|2.808e-6431.59hypothetical protein CAEBREN_28239 [Caenorhabditis... [more]
gi|341899696|gb|EGT55631.1|2.924e-6431.46CBN-HAF-2 protein [Caenorhabditis brenneri][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7992rna7992Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications