EWM22708.1, cds7963 (CDS) Nannochloropsis gaditana

Overview
NameEWM22708.1
Unique Namecds7963
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:285615..285653 +
Alignment locationKK037247.1:285812..285886 +
Alignment locationKK037247.1:286123..286563 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22708.1
ProductAnkyrin repeat-containing domain protein
Orig transcript idgnl|cribi|Naga_100515g4.1460.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:285615..285653 +
KK037247.1supercontigKK037247.1:285812..285886 +
KK037247.1supercontigKK037247.1:286123..286563 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
Homology
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BLAST of EWM22708.1 vs. NCBI_GenBank
Match: gi|585103284|gb|EWM22708.1| (Ankyrin repeat-containing domain protein [Nannochloropsis gaditana])

HSP 1 Score: 369.007 bits (946), Expect = 3.622e-129
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 
Query:    1 MSRVTPLRHAAYRSVVRLLLHYGADPTLADAQGGLPVQVACFLRNRHKRPTVTRLLLEGHRGYLLRKARQLLLLACENAGKGGEGVSGGCKGAPEEGMPGRRGWPRVVLRAHLGMGERGEDRKVFFRREEGREEEKEMEGCGDLGEERGREETKYECEIVEEICAYMLLKINQDLFMELADFFT 184
            MSRVTPLRHAAYRSVVRLLLHYGADPTLADAQGGLPVQVACFLRNRHKRPTVTRLLLEGHRGYLLRKARQLLLLACENAGKGGEGVSGGCKGAPEEGMPGRRGWPRVVLRAHLGMGERGEDRKVFFRREEGREEEKEMEGCGDLGEERGREETKYECEIVEEICAYMLLKINQDLFMELADFFT
Sbjct:    1 MSRVTPLRHAAYRSVVRLLLHYGADPTLADAQGGLPVQVACFLRNRHKRPTVTRLLLEGHRGYLLRKARQLLLLACENAGKGGEGVSGGCKGAPEEGMPGRRGWPRVVLRAHLGMGERGEDRKVFFRREEGREEEKEMEGCGDLGEERGREETKYECEIVEEICAYMLLKINQDLFMELADFFT 184
The following BLAST results are available for this feature:
BLAST of EWM22708.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103284|gb|EWM22708.1|3.622e-129100.00Ankyrin repeat-containing domain protein [Nannochl... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7985rna7985Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications