EWM29868.1, cds796 (CDS) Nannochloropsis gaditana

Overview
NameEWM29868.1
Unique Namecds796
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:441408..441500 -
Alignment locationCM002456.1:440879..441061 -
Alignment locationCM002456.1:440243..440705 -
Alignment locationCM002456.1:440050..440136 -
Alignment locationCM002456.1:439116..439798 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29868.1
Producthemolysin iii
Orig transcript idgnl|cribi|Naga_100106g9.1442.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:441408..441500 -
CM002456.1supercontigCM002456.1:440879..441061 -
CM002456.1supercontigCM002456.1:440243..440705 -
CM002456.1supercontigCM002456.1:440050..440136 -
CM002456.1supercontigCM002456.1:439116..439798 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0019835cytolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR005744Hy-lIII
IPR004254AdipoR/HlyIII-related
Homology
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|585112450|gb|EWM29868.1| (hemolysin iii [Nannochloropsis gaditana])

HSP 1 Score: 1034.63 bits (2674), Expect = 0.000e+0
Identity = 502/502 (100.00%), Postives = 502/502 (100.00%), Query Frame = 0
Query:    1 MGRDVVRTFFQCISKCPRTNKGDNLIKTAVEQSSMAADIMNDVEPTSALLPTQPSTRNGPPSDSPPSAGKLSPFSSALVPIPRNHIDSGDAEGDCDTAQYIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFKCINRLQCCAKLRNVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVVGMGLVATQQR 502
            MGRDVVRTFFQCISKCPRTNKGDNLIKTAVEQSSMAADIMNDVEPTSALLPTQPSTRNGPPSDSPPSAGKLSPFSSALVPIPRNHIDSGDAEGDCDTAQYIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFKCINRLQCCAKLRNVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVVGMGLVATQQR
Sbjct:    1 MGRDVVRTFFQCISKCPRTNKGDNLIKTAVEQSSMAADIMNDVEPTSALLPTQPSTRNGPPSDSPPSAGKLSPFSSALVPIPRNHIDSGDAEGDCDTAQYIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFKCINRLQCCAKLRNVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVVGMGLVATQQR 502          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|553181275|ref|XP_005853536.1| (hemolysin iii [Nannochloropsis gaditana CCMP526] >gi|422295525|gb|EKU22824.1| hemolysin iii [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 904.434 bits (2336), Expect = 0.000e+0
Identity = 457/522 (87.55%), Postives = 461/522 (88.31%), Query Frame = 0
Query:   35 MAADIMNDVEPTSALLPTQPSTRNGPPSDSPPSAGKLSPFSSALVPIPRNHIDSGDAEGDCDTAQYIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFKCINRLQCCAKLRNVEMRVEGNYVF---------------EEILNSLTHGL---------------------------------------GFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVVGMGLVATQQR 502
            MAADIMNDVEPTSALLPTQPSTRNGPPSDSPPSAGKLSPFSSALVPIPRNHIDSGDAEGDCDTAQYIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFKCINRLQCCAKLRNVEMRVEG   +                E L+ + +GL                                       GFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVVGMGLVATQQR
Sbjct:    1 MAADIMNDVEPTSALLPTQPSTRNGPPSDSPPSAGKLSPFSSALVPIPRNHIDSGDAEGDCDTAQYIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFKCINRLQCCAKLRNVEMRVEGKSCWTASERGRLRSDRACTAERLSWVDNGLELACALARLFRDHMHGADEPAPKCNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVVGMGLVATQQR 522          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|298712673|emb|CBJ48698.1| (Hypothetical inner membrane leucine rich repeat protein [Ectocarpus siliculosus])

HSP 1 Score: 323.553 bits (828), Expect = 1.037e-102
Identity = 164/357 (45.94%), Postives = 240/357 (67.23%), Query Frame = 0
Query:  100 YIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFKCINRLQ--CCAK---LRNVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMA 451
            YI NC  Y++ +DPSVVI+L+T W  +QPT+ F  GS+LPLAG+LD NK +++L L G G T  +  AG G+SNARIL ++L  ND+I  LD+SNTG+D  G+ E+C  +  NS++T LN++RN F A+GA +LE  L     L+ LDV  NALG+K I ++Q  CC +    R + + V+GN+VFEE+LN+ THG+GF+A+++G  LLM+ AS  G +P H+W C +FS SLM LY++S+LYHSFFMLP+   +L I DH  IY+LIAGSY+P M+I++H S     +++ +WL A  G   S+ S  +    + T  VE+ ++LG+G +   +WD ++ ++    L L+ G G A
Sbjct:   58 YIRNCRAYDVPVDPSVVISLKTEWDVLQPTRGFGAGSMLPLAGVLDTNKHVKKLRLRGTGSTQRRPVAGGGNSNARILGRILAQNDTIEHLDLSNTGLDADGMRELCAALEKNSSLTDLNLSRNRFGAEGASVLEGTLDSAPALRALDVRSNALGYKSIAKIQRRCCCRPSGCRELAVEVDGNFVFEEVLNAGTHGVGFVAAIIGAFLLMTEASQEGKSPEHFWGCAIFSASLMFLYLASTLYHSFFMLPYVSGLLCIADHCAIYILIAGSYTPFMLISMHGSSLGRTVIIAQWLCALFGCLFSMTSYSLDF--KGTMYVELTLYLGLGLSVLLVWDSVLEHMHQGELMLIAGYGGA 412          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|676390705|ref|XP_009038630.1| (hypothetical protein AURANDRAFT_65285 [Aureococcus anophagefferens] >gi|323451008|gb|EGB06887.1| hypothetical protein AURANDRAFT_65285 [Aureococcus anophagefferens])

HSP 1 Score: 251.136 bits (640), Expect = 4.065e-69
Identity = 144/399 (36.09%), Postives = 215/399 (53.88%), Query Frame = 0
Query:   99 QYIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDML-----QKNTRLKYLDVSRNALGFKCINRLQCCAKLRNVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVV 492
            +Y+  C   ++  DPSV+ TL TRW  + P   F +G LLPL  +L  +K I  L L         +TA +  ++AR L Q L  N S+  LD+S  G+DD  + E+   +  ++ + T  +  N F   G   L   L     + +  L+ LDVS N L +   ++L        V++   GNY  EEILN+LTHG+GFIA+++G + L+  A     T Y  W+CLL+  +L+  + SS+ YH FFM P      Q  DH  IYLLIAGSY+P++ +       A  ++++ W+ AF G C+S A  G+G+S++  N  E+ I+  MG A   I   +   L   A +LL  GG  YI G+ FF+ G   P +H+VWH+FVM  +  HW CVY +++
Sbjct:   47 EYLRRCAELSVQPDPSVLTTLSTRWWFLAPKTYFGDGGLLPLLDVLAESKTITSLTLRS---DPNNSTAASHAADARALAQALRRNTSVTTLDVSACGLDDLAITELAAALGSSATIKTAKLGSNAFGDAGTAALTKHLGAGKWRCSCGLQRLDVSNNGLYYSSSHKLATVLSKHGVKIDAVGNYTTEEILNALTHGMGFIAALIGAIPLLYDAWHRDRTTY--WACLLYQFTLLCCFGSSTAYHGFFMHPRIMLWFQRFDHAAIYLLIAGSYTPLVFLGCRGHLGAAAIVVINWIAAFCGCCISAA--GIGISSEHLNPTEIIIYASMGAAVLPIIGPVKRLLAPEAFFLLALGGALYIAGIFFFVRGMRHPGWHVVWHIFVMAAAATHWFCVYLYIL 438          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|224014818|ref|XP_002297071.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968451|gb|EED86799.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 197.593 bits (501), Expect = 1.293e-51
Identity = 147/433 (33.95%), Postives = 218/433 (50.35%), Query Frame = 0
Query:   98 AQYIINCLHYNMA--IDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRN-----KFIRRLHLSGAGVTNVKATAGNG----------DSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDML---QKNTRLKYLDVSRNALGFKCINRLQCCAKLRNVEMRV--------------EGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHW-WSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANL-LLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVVGM 494
            A+Y   C  Y  +  I+P V+ T R    T++ + SF +  +L L  +L ++      FI RL  S A     K+TA  G             A  L +VL  +  I  + +++  I   G   + + +  N+ V TL +       +GA++    +      + LK +D+S N +GF+    ++   K  N    V              E N VF+E++N +THGLG +   VGT LL +        P+H+  SC ++S+SL++LY SS+LYHSFF L   K +L + D   IYLLIAGSY+P +MIALHH    +L LL   W  A  GI V     G     +  + + + ++LGMG +      DLV  LPA AL LLV GG++Y  GV FF+      + H +WH+FV++GS+ HWLCVY  VV +
Sbjct:  366 AEYTTACRVYGCSDRINPGVLTTFRYCLPTLRVSSSFFDADMLALVEVLLKHCNGALSFITRLDFSVAAKEG-KSTAYGGGGGTGKKGFRSHGAYALSKVLQVSQFIEEVYLTDNRIGSYGATSLFKALKKNTTVKTLLMKGCRIGEKGAMVFASEICGDDSASCLKMVDLSINHIGFRGCFEIEKSLKEWNDHADVYECDNDASPLIVDLEANLVFQEVMNGVTHGLGVVLGSVGTYLLTNRVQG---LPFHYVLSCAIYSISLIILYSSSTLYHSFFALKRTKFILGVFDRCAIYLLIAGSYTPFLMIALHHEEHWSLHLLSFIWAFAVAGILVEATIWGW----EHKSKLSLAMYLGMGWSCVICMPDLVKVLPAQALALLVAGGLSYTGGVPFFVRN--SNMDHAIWHVFVLMGSVFHWLCVYLHVVKL 788          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|219118554|ref|XP_002180047.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408304|gb|EEC48238.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 174.866 bits (442), Expect = 1.095e-44
Identity = 131/439 (29.84%), Postives = 224/439 (51.03%), Query Frame = 0
Query:   71 LSPFSSALVPIPRNHIDSGDAEGDCDTAQYIINCLHYNMA--IDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRN-----KFIRRLHLS-GAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTR--LKYLDVSRNALGFKCINRLQCCAKLRNVE-------MRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHR-ANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFV 491
            +SP     + +P N ID  ++  +   ++YI +C  Y     ++  V+ TLR    +++ + SF +  +L LA I+ +      ++I+RL  S  +    +   AG     A  L ++L  +D I  + +    +   G + +    + NS++  L + R     +GAL   +++  ++   L  +D+S N +GFK    ++     RN         + +EGN V +E+LN +THGLG I +++G+ LL S+     +   H  SC ++S SL++LY SS+LYHSFF+L + K + +++D   IY+LIAGSY+P + I L H    AN LL   W     GI V         + +   L  + ++LGMG        +    +P   ++L++ GG AY +GV FF+      + H +WH+FVM+GS+ HW  +Y +V
Sbjct:  119 ISPLVVGPMMMPGN-IDKENSLLERIISEYIASCRFYGCTDRVNAGVLTTLRFSLPSLRVSGSFHDADMLALAEIMIKYGNGALRYIKRLDFSLSSKEGKLNGKAGFRSHGAFTLAKILQISDYIEEVFVDRNRLGPYGASALFIACSSNSSLKRLLMRRCRVRERGALAFAELISTSSECGLAEVDLSANGIGFKGSVSIERAIVERNQNSDLPALIVNMEGNLVLQEVLNGVTHGLGIILALMGSSLLSSSVRHQPSR--HVVSCAVYSTSLIVLYTSSTLYHSFFILQNTKYIFEVMDKCAIYILIAGSYTPFLQIVLQHDPLWANGLLAFIWCCCLLGISV----EAFFPTYKHKGLFSLAMYLGMGWCCIVCLPEFSRIVPTRLIHLVILGGAAYTLGVPFFVRN--NHLDHCIWHIFVMVGSIFHWCGIYFYV 548          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|1210529939|dbj|GAX11472.1| (monocyte to macrophage differentiation protein [Fistulifera solaris])

HSP 1 Score: 171.014 bits (432), Expect = 1.394e-43
Identity = 121/411 (29.44%), Postives = 206/411 (50.12%), Query Frame = 0
Query:   99 QYIINCLHYNMA--IDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRN-----KFIRRLHLS-GAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTR--LKYLDVSRNALGFKCINRLQCCAKLR------NVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGIC--VSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFV 491
             YI  C  Y     I+  V+ T+R    +++ +  F +  +L L+ I+ R+      FI RL  S  +   ++   AG     A  L ++L  +D+I  +++    I   G + +    + N  +  L +       +GAL   +++  N+   L+ +D+S N +GFK    ++ C ++R       + + VE N VF E++N +THG+G I ++V ++LL  +      +  H  SC ++S SLM+LY+SS+L+HS F L   + +L+ LD   IY+LI+G+Y+P + I L     AN  L   +L AF  IC  + I         +      + ++L MG +A      ++  LP   L  LV GG++Y  GV FF+      + H +WH+FV+ GS+ HW  +Y +V
Sbjct:  103 DYIAACRFYGCGDRINAGVLTTIRFSLPSLRLSGGFHDADMLALSEIMFRHANNALSFIHRLDFSLSSKEGHLHGRAGFRSHGALALAKILQCSDNIKEVNVKRNRIGSFGASALFLACSSNPTLEILGLEACRIGERGALAFAEIMSSNSESGLRQVDLSGNYIGFKGAFAIEECMQMRRQKGLPEIHVDVESNLVFAEVMNGVTHGVGMILALVASVLL--SRQVENKSHRHVISCGVYSASLMVLYLSSTLFHSLFALRSIRWILRSLDKSAIYILISGTYTPFLQIVL-----ANDPLFSTYLLAFLWICCVLGIWVEAFQTEWKYRGHFSLLMYLSMGWSALTFLPTVITRLPPRPLIYLVLGGVSYTAGVPFFVRN--NNLDHAIWHVFVLAGSIFHWWVIYRYV 504          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|1210525228|dbj|GAX15987.1| (monocyte to macrophage differentiation protein [Fistulifera solaris])

HSP 1 Score: 170.629 bits (431), Expect = 1.595e-43
Identity = 122/410 (29.76%), Postives = 204/410 (49.76%), Query Frame = 0
Query:  100 YIINCLHYNMA--IDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRN-----KFIRRLHLS-GAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTR--LKYLDVSRNALGFKCINRLQCCAKLR------NVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGIC--VSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFV 491
            YI  C  Y     I+  V+ T+R    +++ +  F +  +L L+ I+ R+      FI RL  S  +    +   AG     A  L ++L  ++ I  +++    I   G + +    + N  + TL +       +GAL   +++  N+   L+ +D+S N +GFK    ++ C ++R       + + VE N VF E++N +THG+G I ++V ++LL  +      +  H  SC ++S SLM+LY+SS+L+HS F L   + VL+ LD   IY+LIAG+Y+P + I L     A   L   +L AF  IC  + I         +      + ++L MG +A      ++  LP   L  LV GG++Y  GV FF+      + H +WH+FV+ GS+ HW  +Y +V
Sbjct:  100 YIAACRFYGCGDRINAGVLTTIRFSLPSLRLSGGFHDADMLALSEIMFRHANSALSFIHRLDFSLSSKEGQLHGRAGFRSHGALALAKILQCSEYIKEVNVKRNRIGSFGASALFLACSSNPTLETLGLEACRIGERGALAFAEIMSSNSESGLRQVDLSGNYIGFKGAFAIEECLQIRRQKGLPEIHVDVESNLVFAEVMNGVTHGVGMILALVASVLL--SKQVENKSHRHVISCGVYSASLMVLYLSSTLFHSLFALRSIRWVLRSLDKSAIYILIAGTYTPFLQIVL-----AKDPLFSTYLLAFLWICCVLGIWVEAFQTEWKYRGHFSLLMYLSMGWSALTFLPTVITRLPPRPLIYLVLGGVSYTTGVPFFVRN--NNLDHAIWHVFVLAGSIFHWWVIYRYV 500          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|929762681|ref|XP_014156321.1| (hypothetical protein SARC_05290 [Sphaeroforma arctica JP610] >gi|906953051|gb|KNC82419.1| hypothetical protein SARC_05290 [Sphaeroforma arctica JP610])

HSP 1 Score: 151.369 bits (381), Expect = 4.307e-37
Identity = 101/312 (32.37%), Postives = 153/312 (49.04%), Query Frame = 0
Query:  180 VLLSNDSINILDISNTGIDDSGLAEVCQGMAVNSAVTTLNVARNCFSAQGALMLEDMLQKNTRLKYLDVSRNALGFK----CINRLQCCAKLRNVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMGCAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCV 487
            VL +N +I  LD S   +      E+ + +A N  +  + +  N  +      +   L++N  LK+LD++ N +        IN +  C      ++  EGN+   EI NS++HGLG + S +G   L+  AS P     +  SC +F  SL+ LY  S+L HSF  +     +  ILDH  I +LIAGSY+P   + L H+     L   EW+ A   I +S          +     E+ +FL MG AA   + +L+A +    +YLL  GG  Y  GV F++ G  KP+ H VWH  V+ GS+ H+ CV
Sbjct:  104 VLKTNRTIKKLDFSYNRLSPVASKELLRAVADNPVIEHIRLRGNHLTEHICQEIAGELERNITLKHLDITNNDMDMSGVVLLINAMPEC------DVEYEGNFWAAEIANSISHGLGIVLSFIGGYYLIKEASRPVHPTIYLVSCWIFLSSLVALYTCSTLAHSFHRMKITGRMFVILDHSCIAVLIAGSYTPFSWVNLGHTFAGPALGSAEWILAVFAIVLSF-------QGKKYAKYELIVFLLMGWAAAVPFRELMACMQMDGVYLLALGGAFYTFGVGFYLAGRTKPMLHAVWHFMVLSGSISHYFCV 402          
BLAST of EWM29868.1 vs. NCBI_GenBank
Match: gi|857973866|emb|CEP00043.1| (hypothetical protein PBRA_007777 [Plasmodiophora brassicae])

HSP 1 Score: 148.288 bits (373), Expect = 2.903e-36
Identity = 123/407 (30.22%), Postives = 201/407 (49.39%), Query Frame = 0
Query:  100 YIINCLHYNMAIDPSVVITLRTRWATMQPTKSFCEGSLLPLAGILDRNKFIRRLHLSGAGVTNVKATAGNGDSNARILHQVLLSNDSINILDISNTGIDDSGLAEVCQGMAV-NSAVTTLNVARNCFSAQGALMLEDMLQK-NTRLKYLDVSRNALGFKCINRLQC--CAKLRNVEMRVEGNYVFEEILNSLTHGLGFIASVVGTLLLMSAA-------SAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALH-HSHRANLLLLLEWLTAFGGICVSIASSGVGVSNQATNLVEVFIFLGMG--CAAFGIWDDLVANLPATALYLLVGGGMAYIIGVVFFILGEIKPIYHMVWHMFVMLGSLLHWLCVYHFVV 492
            Y+  C  Y + ++  +  +L      + P +      LLPL   L     ++ LHL+ A +         G + A +L   L    S+  LD+  + I     A + + MA  +  +  +N+ R         M+ D+L+   +RLK LD+S N LG   +  +Q   CA     E+  E N    EILNS+THG+G + +++G+  L+  A       +  GT PY        + +L + Y+SS+LYHS F L  AK   + LDH  +++LIAGSY+P ++I+L      AN +LL  WL A  GI ++    G    ++  + +   ++L MG  C   G+       +P  A+ L++ GG+AY +GV F + G   P  H+VWH++V+LGS LH+  +  ++V
Sbjct:   11 YVEQCHRYKVDVNAGIAASLLMGSRAIVPDRHLQALDLLPLLQALPLATQVQELHLAHARL---------GVAVAGLLVDCLRRLPSVVRLDLEGSRIGPQAAAPLLEYMATGDCPLEHVNLRRCHLGGSLTSMILDVLRNPASRLKSLDLSSNQLGMASVFAIQSVGCA----FEVDTESNLYVHEILNSVTHGVGLLFAMIGSWFLIRRAWQTRDTRNLVGTVPY--------AFALCLTYLSSTLYHSLFKLRAAKRFFKYLDHGSVFMLIAGSYTPFLVISLRSRPEIANPMLLGIWLLALVGIFLTTFMRG----HKHFDWLSTALYLAMGWMCVIAGVPIVRSGLIPQPAMLLVLHGGIAYTVGVAFLVKGATTPAMHIVWHLWVLLGSSLHYAAIVAYIV 392          
The following BLAST results are available for this feature:
BLAST of EWM29868.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112450|gb|EWM29868.1|0.000e+0100.00hemolysin iii [Nannochloropsis gaditana][more]
gi|553181275|ref|XP_005853536.1|0.000e+087.55hemolysin iii [Nannochloropsis gaditana CCMP526] >... [more]
gi|298712673|emb|CBJ48698.1|1.037e-10245.94Hypothetical inner membrane leucine rich repeat pr... [more]
gi|676390705|ref|XP_009038630.1|4.065e-6936.09hypothetical protein AURANDRAFT_65285 [Aureococcus... [more]
gi|224014818|ref|XP_002297071.1|1.293e-5133.95predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|219118554|ref|XP_002180047.1|1.095e-4429.84predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210529939|dbj|GAX11472.1|1.394e-4329.44monocyte to macrophage differentiation protein [Fi... [more]
gi|1210525228|dbj|GAX15987.1|1.595e-4329.76monocyte to macrophage differentiation protein [Fi... [more]
gi|929762681|ref|XP_014156321.1|4.307e-3732.37hypothetical protein SARC_05290 [Sphaeroforma arct... [more]
gi|857973866|emb|CEP00043.1|2.903e-3630.22hypothetical protein PBRA_007777 [Plasmodiophora b... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna796rna796Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications