EWM22715.1, cds7955 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|585103293|gb|EWM22715.1| (dehydrogenase reductase sdr family member 9 [Nannochloropsis gaditana]) HSP 1 Score: 810.446 bits (2092), Expect = 0.000e+0 Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0
Query: 1 MTRPLAFLVIVVVVEYNVVCCLTPNIIPYRCQRKKKNVCKEVRSACRLFNTEKSVVRLRCPTSPTGTSTRSDMNGDRQVTNVEKRASFSSFLLQLPNILLQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGELFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAFGYGRGGGQERGREGTRQGGSRGRDEHALHATR 393
MTRPLAFLVIVVVVEYNVVCCLTPNIIPYRCQRKKKNVCKEVRSACRLFNTEKSVVRLRCPTSPTGTSTRSDMNGDRQVTNVEKRASFSSFLLQLPNILLQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGELFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAFGYGRGGGQERGREGTRQGGSRGRDEHALHATR
Sbjct: 1 MTRPLAFLVIVVVVEYNVVCCLTPNIIPYRCQRKKKNVCKEVRSACRLFNTEKSVVRLRCPTSPTGTSTRSDMNGDRQVTNVEKRASFSSFLLQLPNILLQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGELFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAFGYGRGGGQERGREGTRQGGSRGRDEHALHATR 393
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|553193850|ref|XP_005855844.1| (17-beta-hydroxysteroid dehydrogenase type 6, partial [Nannochloropsis gaditana CCMP526] >gi|422293217|gb|EKU20517.1| 17-beta-hydroxysteroid dehydrogenase type 6, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 348.206 bits (892), Expect = 1.192e-117 Identity = 167/170 (98.24%), Postives = 168/170 (98.82%), Query Frame = 0
Query: 73 MNGDRQVTNVEKRASFSSFLLQLPNILLQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAH 242
MNGDRQVTNVEKRASFSS LLQLPNILLQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQ+VKSLILFMKGK GEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAH
Sbjct: 1 MNGDRQVTNVEKRASFSSLLLQLPNILLQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQEVKSLILFMKGKNGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAH 170
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|585106696|gb|EWM25060.1| (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana]) HSP 1 Score: 177.948 bits (450), Expect = 2.679e-45 Identity = 103/264 (39.02%), Postives = 150/264 (56.82%), Query Frame = 0
Query: 99 LLQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGELFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAFG 362
+L N+++HLPI+ D+AW++ + + P + L ++ F++ L +L+ ++ KG RA+LITGCD+GFG+DLA+AL K+G W+VYAGCL+ ++ +A A + G +V + +DVT+ +++ V+++ E +LFA+V NAG+G GLVDW P+ +R IMEVN F MIA KACLPLLK+ RIV VTS AG+ G M AY ASKHAAEAF
Sbjct: 1210 MLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSG----------ALVTRLEQPKG-----RAVLITGCDTGFGYDLAIALV-----------KKG---------WRVYAGCLTQAAVAELKTKA--AGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKESKG-------RIVNVTSMAGIFLGAPCMSAYAASKHAAEAFS 1429
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|585108719|gb|EWM26631.1| (NAD(P)-binding domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 133.65 bits (335), Expect = 2.839e-31 Identity = 89/264 (33.71%), Postives = 124/264 (46.97%), Query Frame = 0
Query: 99 LLQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGE-LFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAF 361
LL N+ L + D A+Y W + P+ +L I+F L KG + +LITGCDSGFG LA+AL+ W VYA C++ G A +G + L +DVT+ +V + +V A E L+ALVNNAG+ G DW +EH+R ME+N+FG + + K LPLLK+ A RI+ +TSF+GL+PG AY ASKHAAE++
Sbjct: 52 LLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTC------------------KGNRKPVGPVLITGCDSGFGRGLALALSELG--------------------WNVYATCMTTDGVHYF-------AKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESW 270
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|585111089|gb|EWM28666.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 127.872 bits (320), Expect = 8.536e-30 Identity = 91/265 (34.34%), Postives = 135/265 (50.94%), Query Frame = 0
Query: 99 LLQATNNVLHLPILFDLAWY--VVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGELFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAF 361
L+ NNV H+P+ D+ +Y WA++ P LL ++F T +S I ++ E E++ ++ITGCD+GFG LA+ L K+G +KVYA CL+ +++ + L + LDVT+ +VA+ R+ A +FALVNNAG+ AGL+DW+ M FR MEVNYF +++V+KA LP LKK RI++++S AG+ G AY +SKHA E F
Sbjct: 3 LINWANNVAHIPVFEDMCYYNFFFWAWF--WGP--LLGALVFLHDATTGFFFS---------IFYV-----EPSEDKVVVITGCDTGFGKSLALDLG-----------KKG---------FKVYASCLTQRSADELKKECDA------LQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKSKG-------RIIMMSSAAGVACGYPVTCAYSSSKHALELF 216
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|585108794|gb|EWM26706.1| (retinol dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 125.561 bits (314), Expect = 8.047e-29 Identity = 96/265 (36.23%), Postives = 121/265 (45.66%), Query Frame = 0
Query: 99 LLQATNNVLHLPI-LFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGE-LFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAF 361
LL NN LH I ++ + +Y+ W + P +L F L LF KG + +LITGC SGFG DL MALAA+ WKVYA C+ P L LDVT +V A V E E L+ALVNNAG G DW +++F+ M+VNY+G I V+KA LPLL KR R A RI+ + S +GL+PG G Y ASKHAAEA+
Sbjct: 28 LLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFT------------------AKGFRKPCGPVLITGCSSGFGLDLTMALAAQG--------------------WKVYA-CVRREADMAPFSNNPNVKG------LILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLL-KRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAW 246
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|585108707|gb|EWM26619.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 121.709 bits (304), Expect = 2.540e-27 Identity = 85/267 (31.84%), Postives = 131/267 (49.06%), Query Frame = 0
Query: 99 LLQATNNVLHLPILFDLAWYVVW-AFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGELFALVNNAG---IGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAF 361
++ N+ +H + D+ +Y W F++ M P LL +L V D + A +G + +L+TGCD+GFG LA+ALA R WKV A C + TG + + R P + I P+ LD++ E+ + + A+ L+ALVNN +G GLV+W+ +++++ MEVN + I +KA LPLLKK +A PRIV + S AG+VPGQ + Y +KHA +A+
Sbjct: 28 IISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITA-------------------RGYRQPCGPVLVTGCDTGFGKALALALAE--------------------RHWKVIAACSTDTGVK--SYREPANGSMNI-DPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAW 252
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|585111118|gb|EWM28695.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 118.627 bits (296), Expect = 2.247e-26 Identity = 92/262 (35.11%), Postives = 128/262 (48.85%), Query Frame = 0
Query: 100 LQATNNVLHLPILFDLAWYVVWAFYIAMAPFYLLCHILFFVLDTLFAIYSFARQKVKSLILFMKGKKGEAREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRAECRGELFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAF 361
L+ NN+ H+ +L + WY + + PF + L +Y F L E ++AI ITGCD+GFG LA+ LA + +VYA CL+A G E+I A + + LDVT ++V A RV AE L+ALVNNAG+ +GL+DW + FR MEVN+FG+++V+KA LPL+K+ C RIV+V+S AG+ G Y ASKHA E F
Sbjct: 5 LEFWNNLCHIDLLEEWIWYSYFTGAWLLGPF----------MAFLIVVYDFCSGFAFPLW------HVEPSRDKAIFITGCDTGFGRSLAVRLAQKGF--------------------RVYAACLTANGVEEIK------AECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKR-----CKG--RIVVVSSVAGVSCGYPLSAPYSASKHAVELF 217
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|652776715|ref|WP_027085902.1| (short-chain dehydrogenase/reductase [Cohnella panacarvi]) HSP 1 Score: 113.235 bits (282), Expect = 4.501e-25 Identity = 76/197 (38.58%), Postives = 109/197 (55.33%), Query Frame = 0
Query: 169 AREERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGI---LVPLSLDVTQASEVATAVDRVRAECRGELFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAFG 362
A + A L+TG SGFG A+ LA + W VYAG ++ E + + EA A GI +VPL LDVT ++A AV+ +R + +G L ALVNNAG G V+ VP+E +R+ E N FG++A+++A LP++ RA R+ RIVL++S +G + G ++ Y ASKHA E FG
Sbjct: 3 ADKRNAALVTGAGSGFGLLTALLLAEKG--------------------WMVYAGLRDSSRSEGLVK---EATARGIADQVVPLQLDVTDCGQIAQAVETIR-QRQGRLDALVNNAGFAAGGFVEEVPLERWREQFETNVFGLVAMTQAVLPMM--RAQRSG----RIVLISSVSGRI-GFPALAPYVASKHAVEGFG 168
BLAST of EWM22715.1 vs. NCBI_GenBank
Match: gi|196000450|ref|XP_002110093.1| (hypothetical protein TRIADDRAFT_21854 [Trichoplax adhaerens] >gi|190588217|gb|EDV28259.1| hypothetical protein TRIADDRAFT_21854 [Trichoplax adhaerens]) HSP 1 Score: 109.383 bits (272), Expect = 3.776e-24 Identity = 71/195 (36.41%), Postives = 101/195 (51.79%), Query Frame = 0
Query: 170 REERAILITGCDSGFGFDLAMALAAESLACREEEKKEGRREEPRGRRWKVYAGCLSATGREQITQRAPEAAAHGILVPLSLDVTQASEVATAVDRVRA---ECRGELFALVNNAGIGVAGLVDWVPMEHFRKIMEVNYFGMIAVSKACLPLLKKRASRACDAPPRIVLVTSFAGLVPGQLSMGAYCASKHAAEAF 361
R ILITGCDSGFG LA L + + C V+A CL+ G Q+ Q +DVTQ ++ A ++A E RG ++A+VNNAGI GL+DW+PME ++K+ +VN +GM+AV+K +P++ + R V V S +G++P + MGAY SK AAE F
Sbjct: 4 NNNRYILITGCDSGFGNLLAKRL--DLIGCH------------------VFAACLTQQGVTQLAQSTSSRVKT-----FMMDVTQQQDIENAYSMIKAALPEDRG-IWAVVNNAGILRTGLIDWMPMEEYKKVADVNLWGMVAVTKRFIPMVIREQG-------RFVNVVSLSGVLPYEY-MGAYTISKFAAEGF 164 The following BLAST results are available for this feature:
BLAST of EWM22715.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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