EWM22720.1, cds7952 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|585103302|gb|EWM22720.1| (hypothetical protein Naga_101219g1 [Nannochloropsis gaditana]) HSP 1 Score: 310.457 bits (794), Expect = 4.065e-107 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
Query: 1 MLEEMQRQEEEQRRMPVVVVSQHANSDTGSKTKPVVMRGKDGELQFPGREEGSGDHGGTGAAESLDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFDPKLAR 151
MLEEMQRQEEEQRRMPVVVVSQHANSDTGSKTKPVVMRGKDGELQFPGREEGSGDHGGTGAAESLDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFDPKLAR
Sbjct: 1 MLEEMQRQEEEQRRMPVVVVSQHANSDTGSKTKPVVMRGKDGELQFPGREEGSGDHGGTGAAESLDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFDPKLAR 151
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|553193872|ref|XP_005855850.1| (hypothetical protein NGA_0570100 [Nannochloropsis gaditana CCMP526] >gi|422293223|gb|EKU20523.1| hypothetical protein NGA_0570100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 124.405 bits (311), Expect = 1.469e-33 Identity = 61/63 (96.83%), Postives = 61/63 (96.83%), Query Frame = 0
Query: 1 MLEEMQRQEEEQRRMPVVVVSQHANSDTGSKTKPVVMRGKDGELQFPGREEGSGDHGGTGAAE 63
MLEEMQR EEEQRRMPVVVVSQHANSDTGSKTKPVVM GKDGELQFPGREEGSGDHGGTGAAE
Sbjct: 66 MLEEMQRHEEEQRRMPVVVVSQHANSDTGSKTKPVVMWGKDGELQFPGREEGSGDHGGTGAAE 128
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|919093461|ref|XP_013383559.1| (PREDICTED: uncharacterized protein LOC106153949 [Lingula anatina]) HSP 1 Score: 68.9366 bits (167), Expect = 8.383e-11 Identity = 39/129 (30.23%), Postives = 66/129 (51.16%), Query Frame = 0
Query: 20 VSQHANSDTGSKTKPVVMRGKDGELQF--PGREEGSGDHGGTGAAESLDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFD 146
V Q +NS+ S PV++R KDG +++ RE + ++ CLD G ++ ++ + Y + E++ KTAF+ ++ YE +R +G+ N P + R LV RGLTW +V+ D
Sbjct: 909 VIQPSNSEWASP--PVLIRKKDGSVRWCVDYRELNKKTIKDSYPIPNICDCLDCLAGNQFLSLIDMAQGYFQIEIDEKDRNKTAFITRYGLYEHKRMAMGLTNSPASFSRAVQLVLRGLTWEKVLVYLD 1035
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|1207921754|ref|XP_021349841.1| (uncharacterized protein LOC110448106 [Mizuhopecten yessoensis] >gi|1207931771|ref|XP_021355197.1| uncharacterized protein LOC110451483 [Mizuhopecten yessoensis] >gi|1207951824|ref|XP_021365943.1| uncharacterized protein LOC110458536 [Mizuhopecten yessoensis] >gi|1207957085|ref|XP_021368768.1| uncharacterized protein LOC110460270 [Mizuhopecten yessoensis] >gi|1207963129|ref|XP_021371995.1| uncharacterized protein LOC110462381 [Mizuhopecten yessoensis] >gi|1207966480|ref|XP_021373801.1| uncharacterized protein LOC110463496 [Mizuhopecten yessoensis] >gi|1207970005|ref|XP_021375693.1| uncharacterized protein LOC110464680 [Mizuhopecten yessoensis]) HSP 1 Score: 68.1662 bits (165), Expect = 1.844e-10 Identity = 29/82 (35.37%), Postives = 47/82 (57.32%), Query Frame = 0
Query: 65 LDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFD 146
++ CLD +GA F+ ++ YH+ EV+ KTAFV K +E+ R G+ N P ++R +LV RG W+I +++ D
Sbjct: 841 IEECLDTLSGATLFSTVDLMSGYHQIEVDEMDRSKTAFVTKQGLFEYTRMPFGLSNSPSTFQRAMELVLRGFQWVILLIYLD 922
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|1139792625|ref|XP_019923125.1| (PREDICTED: uncharacterized protein LOC109618848, partial [Crassostrea gigas]) HSP 1 Score: 67.3958 bits (163), Expect = 3.136e-10 Identity = 37/120 (30.83%), Postives = 61/120 (50.83%), Query Frame = 0
Query: 32 TKPVVMRGKDGELQF--PGREEGSGDHGGTGAAESLDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFDPKL 149
+ PV++R KDG++++ R + +D C D +G +F+ A+H+ + +KTAF+ ++ +EFRR G+ N P + R +LV RGLTW I + F D L
Sbjct: 598 SAPVLIRKKDGQVRWCLDYRRLNNVTRKDVFPLPLIDECFDTLSGNVWFSKLDANSAFHQIMISPKDRKKTAFITRYGLFEFRRMGFGLCNAPATFSRAMNLVLRGLTWSIVLAFLDDAL 717
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|919045756|ref|XP_013406092.1| (PREDICTED: uncharacterized protein LOC106170666 [Lingula anatina]) HSP 1 Score: 65.855 bits (159), Expect = 9.845e-10 Identity = 42/147 (28.57%), Postives = 71/147 (48.30%), Query Frame = 0
Query: 8 QEEEQRRMPVVVVSQHANSDTGSKTKPVVMRGKDGELQFPGREEGSGDHGGTGAAES--------LDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFD 146
+E ++M V Q + SD S PV++R KDG +++ D+ + +D+CLD +G+ +F+ AY + + + +KTAF+ K+ YE R G+ P + R+ +LVFRGL+W + F D
Sbjct: 962 EEAHLQKMIQAGVIQESTSDWASA--PVLIRKKDGSVRY------CIDYRALNEVTTKDVFPLPLVDNCLDTLSGSVFFSKLDANSAYWQVPIREEDRKKTAFITKYGLYEHIRMAFGLCGAPATYARIMNLVFRGLSWKTVLAFLD 1100
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|919004755|ref|XP_013381256.1| (PREDICTED: uncharacterized protein LOC106152279 [Lingula anatina]) HSP 1 Score: 63.929 bits (154), Expect = 5.236e-9 Identity = 40/144 (27.78%), Postives = 72/144 (50.00%), Query Frame = 0
Query: 5 MQRQEEEQRRMPVVVVSQHANSDTGSKTKPVVMRGKDGELQF--PGREEGSGDHGGTGAAESLDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFD 146
++ +E +M V Q + SD + PV++R +DG +++ R + T ++ CLD +G +F+ AY + +V+ + +KTAF+ K+ +E R G+ N P + R+ +L+ RGLTW + F D
Sbjct: 647 VEEEEAHLNKMLKAGVIQESTSDWAAA--PVLIRKRDGSVRWCIDYRALNNVTVKDTYPLPLMEDCLDTLSGKTWFSKLDANSAYWQIKVKKEDRKKTAFITKYGLFEHVRMGFGLTNAPATYSRVVNLLMRGLTWKTVLAFLD 788
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|1022748247|gb|KZS00679.1| (Uncharacterized protein APZ42_002933, partial [Daphnia magna]) HSP 1 Score: 61.2326 bits (147), Expect = 1.581e-8 Identity = 36/123 (29.27%), Postives = 59/123 (47.97%), Query Frame = 0
Query: 26 SDTGSKTKPVVMRGKDGELQF--PGREEGSGDHGGTGAAESLDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFD 146
SD+ ++ V+++ KDG ++F R +D LD NGA +F+ + Y + V V+KTAFV + +EF+R G+ N P ++RL D V W+ +V+ D
Sbjct: 8 SDSPWSSQVVLVKKKDGSIRFCVDYRRLNQATTRDVYPLPRIDEILDNLNGASFFSTIDLYRGYWQVPVNKSDVKKTAFVTRDGLFEFKRMPFGLSNAPATFQRLMDQVLASHKWLHCLVYLD 130
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|1022764431|gb|KZS09850.1| (Uncharacterized protein APZ42_025824, partial [Daphnia magna]) HSP 1 Score: 62.3882 bits (150), Expect = 1.648e-8 Identity = 39/117 (33.33%), Postives = 57/117 (48.72%), Query Frame = 0
Query: 35 VVMRGKDGELQFPG--REEGSGDHGGTGAAESLDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFDPKL 149
V++R KD + +F R + T D D GA++FA +L Y++ V +EKTAF+ +EF R GV N PG ++RL D V R L W + +V+ D L
Sbjct: 722 VLVRKKDQDYRFCADYRRLNAVTKRDTYPLPRADDIFDRLAGAKWFASIDLLSGYYQVPVAEKDIEKTAFITPDGLFEFTRMPQGVHNGPGCFQRLMDRVLRHLKWSMCLVYLDDCL 838
BLAST of EWM22720.1 vs. NCBI_GenBank
Match: gi|954471089|gb|KRZ01677.1| (Retrovirus-related Pol polyprotein from transposon opus [Trichinella zimbabwensis]) HSP 1 Score: 62.003 bits (149), Expect = 1.809e-8 Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0
Query: 65 LDSCLDVFNGARYFAVTGILLAYHETEVEADPVEKTAFVRKFREYEFRRAMLGVRNLPGFWRRLADLVFRGLTWIIRVVFFD 146
+D D +GA++F+ + + + EVE +E+TAF F Y+FR G+ N P ++RL +LV +GL W V+ D
Sbjct: 335 IDDTFDALSGAKWFSTMDLSSGFWQVEVEEKDMERTAFCTPFGLYQFRVMPFGLCNAPSIFQRLMELVLQGLNWSTCPVYLD 416 The following BLAST results are available for this feature:
BLAST of EWM22720.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|