EWM29875.1, cds794 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29875.1 vs. NCBI_GenBank
Match: gi|585112457|gb|EWM29875.1| (hypothetical protein Naga_100106g7 [Nannochloropsis gaditana]) HSP 1 Score: 2051.17 bits (5313), Expect = 0.000e+0 Identity = 1008/1008 (100.00%), Postives = 1008/1008 (100.00%), Query Frame = 0 Query: 1 MGSSKPLFCEKLYAVSRPSSIVWPRQDARSTHPPLALDHVVMINGRKGAMAAAFLFLLSLIAGKAWVLHPSTSSSCAGQSFPSLVGCVAAATFHSPVKSGKAAGEEAVGGSESERRELVLANKPPDAVQRAARTRPSHKAKLPQDRQRHTANGGWSEGDVRAAHHHYQDPLHSEATSAHAPSYTRHPFSTLARTRLRGSDCNTLLNSIETYAEGASVDELSDALSRLGRLATSKEALGRICHDARFHLLLQRLVESSPLMPPKRAPFLLSSLAKFSTAPGPTVTAFISTPSVQALLPALQKRVDAGLDQYSPIAFCTVAFAFSRLRYAPHLEVEDCEIEDTKGPDKASHTPPSPSDPPDRSVLAWWSRFIEASQNRLIEFSPWELSQLVRSLMAQTGAPKEALLSPPFLTLTLRCAERQLFTAFTVRDLEGLATSLSKIPPHLFKPPQSFLETVVRAADAQLPRGFRPPSLARFLHALSRLEGFSPDPHFLRRAEQACAGWTGTWEQGPIALIVQAWSWLKYHPSEATLATLLGQARGMLEDGVFTPLNAGTLIQSLGELRRSPGDAWLSTFCEAAALKFPDMHGKDLNFILKGLAKLNWYPGDAFMVGLLGHMRPYLEGFNGADLQFTMSSIVGLHYLPHRAFLDAFQARFSRLLQDRQVSSRNLCIVLWAFAALEVPNARPFVVECMRAAIAQLEAERPRWGQWEADAPETWSLTARIRQLRQVYLYALRLEGAGSQSDRNESSLAEEFRGMGLVELLETGLRYSKEELVLAKSQESGFHREVAEILQSLGVRARRSVDCFVLDLMLESPQAAEASGQGGDKGEGLGAGTLDSTGKERQDWSGRGMSTGQRQSSEGDAVRDAEDPRTEGPPAGGKEQEIKGAKDATKPLVLLLHGPSRFLRGLTGTASPKMEAGTAFKVKILQTKSLHRFADVVSLDVWEWARQRTREEKVEFLRQKIGPTLLETYMAPSMTLASADGGGRSEKQEKKEKGKGEGKVMEGMRQVMA 1008 MGSSKPLFCEKLYAVSRPSSIVWPRQDARSTHPPLALDHVVMINGRKGAMAAAFLFLLSLIAGKAWVLHPSTSSSCAGQSFPSLVGCVAAATFHSPVKSGKAAGEEAVGGSESERRELVLANKPPDAVQRAARTRPSHKAKLPQDRQRHTANGGWSEGDVRAAHHHYQDPLHSEATSAHAPSYTRHPFSTLARTRLRGSDCNTLLNSIETYAEGASVDELSDALSRLGRLATSKEALGRICHDARFHLLLQRLVESSPLMPPKRAPFLLSSLAKFSTAPGPTVTAFISTPSVQALLPALQKRVDAGLDQYSPIAFCTVAFAFSRLRYAPHLEVEDCEIEDTKGPDKASHTPPSPSDPPDRSVLAWWSRFIEASQNRLIEFSPWELSQLVRSLMAQTGAPKEALLSPPFLTLTLRCAERQLFTAFTVRDLEGLATSLSKIPPHLFKPPQSFLETVVRAADAQLPRGFRPPSLARFLHALSRLEGFSPDPHFLRRAEQACAGWTGTWEQGPIALIVQAWSWLKYHPSEATLATLLGQARGMLEDGVFTPLNAGTLIQSLGELRRSPGDAWLSTFCEAAALKFPDMHGKDLNFILKGLAKLNWYPGDAFMVGLLGHMRPYLEGFNGADLQFTMSSIVGLHYLPHRAFLDAFQARFSRLLQDRQVSSRNLCIVLWAFAALEVPNARPFVVECMRAAIAQLEAERPRWGQWEADAPETWSLTARIRQLRQVYLYALRLEGAGSQSDRNESSLAEEFRGMGLVELLETGLRYSKEELVLAKSQESGFHREVAEILQSLGVRARRSVDCFVLDLMLESPQAAEASGQGGDKGEGLGAGTLDSTGKERQDWSGRGMSTGQRQSSEGDAVRDAEDPRTEGPPAGGKEQEIKGAKDATKPLVLLLHGPSRFLRGLTGTASPKMEAGTAFKVKILQTKSLHRFADVVSLDVWEWARQRTREEKVEFLRQKIGPTLLETYMAPSMTLASADGGGRSEKQEKKEKGKGEGKVMEGMRQVMA Sbjct: 1 MGSSKPLFCEKLYAVSRPSSIVWPRQDARSTHPPLALDHVVMINGRKGAMAAAFLFLLSLIAGKAWVLHPSTSSSCAGQSFPSLVGCVAAATFHSPVKSGKAAGEEAVGGSESERRELVLANKPPDAVQRAARTRPSHKAKLPQDRQRHTANGGWSEGDVRAAHHHYQDPLHSEATSAHAPSYTRHPFSTLARTRLRGSDCNTLLNSIETYAEGASVDELSDALSRLGRLATSKEALGRICHDARFHLLLQRLVESSPLMPPKRAPFLLSSLAKFSTAPGPTVTAFISTPSVQALLPALQKRVDAGLDQYSPIAFCTVAFAFSRLRYAPHLEVEDCEIEDTKGPDKASHTPPSPSDPPDRSVLAWWSRFIEASQNRLIEFSPWELSQLVRSLMAQTGAPKEALLSPPFLTLTLRCAERQLFTAFTVRDLEGLATSLSKIPPHLFKPPQSFLETVVRAADAQLPRGFRPPSLARFLHALSRLEGFSPDPHFLRRAEQACAGWTGTWEQGPIALIVQAWSWLKYHPSEATLATLLGQARGMLEDGVFTPLNAGTLIQSLGELRRSPGDAWLSTFCEAAALKFPDMHGKDLNFILKGLAKLNWYPGDAFMVGLLGHMRPYLEGFNGADLQFTMSSIVGLHYLPHRAFLDAFQARFSRLLQDRQVSSRNLCIVLWAFAALEVPNARPFVVECMRAAIAQLEAERPRWGQWEADAPETWSLTARIRQLRQVYLYALRLEGAGSQSDRNESSLAEEFRGMGLVELLETGLRYSKEELVLAKSQESGFHREVAEILQSLGVRARRSVDCFVLDLMLESPQAAEASGQGGDKGEGLGAGTLDSTGKERQDWSGRGMSTGQRQSSEGDAVRDAEDPRTEGPPAGGKEQEIKGAKDATKPLVLLLHGPSRFLRGLTGTASPKMEAGTAFKVKILQTKSLHRFADVVSLDVWEWARQRTREEKVEFLRQKIGPTLLETYMAPSMTLASADGGGRSEKQEKKEKGKGEGKVMEGMRQVMA 1008
BLAST of EWM29875.1 vs. NCBI_GenBank
Match: gi|553190633|ref|XP_005855232.1| (hypothetical protein NGA_0160400 [Nannochloropsis gaditana CCMP526] >gi|422293834|gb|EKU21134.1| hypothetical protein NGA_0160400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 86.6557 bits (213), Expect = 1.030e-13 Identity = 82/316 (25.95%), Postives = 128/316 (40.51%), Query Frame = 0 Query: 363 LAWWSRFIEASQNRLIEFSPWELSQLVRSLMAQTGAPKEALLSPPFLTLTLRCAERQLFTAFTVRDLEGLATSLSKIPPHLFKPPQSFLETVVRAADAQLPRGFRPPSLARFLHALSRLEGFSPDPHFLRRAEQACAGWTGTWEQGPIALIVQAWSWLKYHPSEATLATLLGQARGMLEDGVFTPLNAGTLIQSLGELRRSPGDAWLSTFCEAAALKFPDMHGKDLNFILKGLAKLNWYPGDAFMVGLLGHMRPYLEGFNGADLQFTMSSIVGLHYLPHRAFLDAFQARFSRLLQDRQVSSRNLCIVLWAFAALEV 678 L + + F E N L++F P L ++R P + PFL + CA R+L F R L L+ + +PP F+ +VR D QL + FS W P A + A S L Y P E L ++ +A+ L F P I L +L+ PG ++ + +A LK + +L +A+L +YPG +FM + P L F +L + LHY P AFL A+ + Q R+++ +++ +VLW+FA L+V Sbjct: 324 LEFMALFTEVVANSLMDFQPVGLMSIIRGFAKLGHDPGK-----PFLKVFTACAMRKLHN-FPPRALSSTIQGLATL---RHQPPPEFMALLVREMDRQL-------------------DDFS-------------------WLDIPNA--ITALSKLLYLPPEPFLRRVVAKAKEKLS--AFNPQALCNFIFGLFKLQHDPGVEFMPVYFQACHLKLDQFTPAGFSSMLHSVARLGYYPGTSFMEDFEALVAPRLGRFTKGELWKLAHGLATLHYRPQDAFLTAYWEALAG--QGRRLTVKDVSLVLWSFAVLDV 586
BLAST of EWM29875.1 vs. NCBI_GenBank
Match: gi|585110040|gb|EWM27763.1| (hypothetical protein Naga_100982g1 [Nannochloropsis gaditana]) HSP 1 Score: 80.1073 bits (196), Expect = 1.131e-11 Identity = 79/314 (25.16%), Postives = 125/314 (39.81%), Query Frame = 0 Query: 363 LAWWSRFIEASQNRLIEFSPWELSQLVRSLMAQTGAPKEALLSPPFLTLTLRCAERQLFTAFTVRDLEGLATSLSKIPPHLFKPPQSFLETVVRAADAQLPRGFRPPSLARFLHALSRLEGFSPDPHFLRRAEQACAGWTGTWEQGPIALIVQAWSWLKYHPSEATLATLLGQARGMLEDGVFTPLNAGTLIQSLGELRRSPGDAWLSTFCEAAALKFPDMHGKDLNFILKGLAKLNWYPGDAFMVGLLGHMRPYLEGFNGADLQFTMSSIVGLHYLPHRAFLDAFQARFSRLLQDRQVSSRNLCIVLWAFAAL 676 L + + F E N L++F P L ++R P + PFL + CA R+L F R L L+ + +PP F+ +VR D QL + FS W P A + A S L Y P E L ++ +A+ L F P I L +L+ PG ++ + +A LK + +L +A+L +YPG +FM + P L F +L + LHY P AFL A+ + Q R+++ +++ +VLW ++L Sbjct: 348 LEFMALFTEVVANSLMDFQPVGLMSIIRGFAKLGHDPGK-----PFLKVFTACAMRKLHN-FPPRALSSTIQGLATL---RHQPPPEFMALLVREMDRQL-------------------DDFS-------------------WLDIPNA--ITALSKLLYLPPEPFLRRVVAKAKEKLS--AFNPQALCNFIFGLFKLQHDPGVEFMPVYFQACHLKLDQFTPAGFSSMLHSVARLGYYPGTSFMEDFEALVAPRLGRFTKGELWKLAHGLATLHYRPQDAFLTAYWEALAG--QGRRLTVKDVSLVLWTTSSL 608
BLAST of EWM29875.1 vs. NCBI_GenBank
Match: gi|799031407|ref|WP_045917601.1| (hypothetical protein [Orientia tsutsugamushi] >gi|788102611|gb|KJV71514.1| hypothetical protein OTSTA716_2236 [Orientia tsutsugamushi str. TA716]) HSP 1 Score: 74.7146 bits (182), Expect = 5.829e-10 Identity = 68/332 (20.48%), Postives = 134/332 (40.36%), Query Frame = 0 Query: 365 WWSRFIEASQNRLIEFSPWELSQLVRSLMAQTGAPKEALLSPPFLTLTLRCAERQLFTAFTVRDLEGLATSL---SKIPPHLFKPPQSFLETVVRAADAQLPRGFRPPSLARFLHALSRLEGFSPDPHFLRRAEQACAGWTGTWEQGPIALIVQAWSWLKYHPSEATLATLLGQARGMLEDGVFTPLNAGTLIQSLGELRRSPGDAWLSTFCEAAALKFPDMHGKDLNFILKGLAKLNWYPGDAFMVGLLGHMRPYLEGFNGADLQFTMSSIVGLHYLPHRAFLDAFQARFSRLLQDRQVSSRNLCIVLWAFAALEVPNARPFVVECMRAAI 693 + + F +S N + F+ LS + +L + P E + F C ++ + +DL +L S IPP+ F +SF E + + F+ SL+ ++AL RL +P FL + ++ ++ + LK P L + ++ F I +LG L +P + +L++F ++ + ++L+ + GLA LN P + F+ G + F +L T+++ L H F + F + S++ ++++L ++AF L + F+ +C A+ Sbjct: 65 FIASFFNSSVNIINSFNSQNLSNTIYALGRLSITPTEEFIESFF-----ECYVNRI-NSLNSQDLSNTIYALGRLSVIPPNEF--IESFFEHCIN-----IMSSFKAQSLSNTIYALGRL-SITPTEEFLASFFNSSVNIINSFNSQELSNTINGLKNLKIKPPNEFLESFFEHCINIMSS--FNSQELSNTIYALGRLSITPTEEFLASFFNSSVNIINSFNSQELSNTIGGLAHLNIKPPEEFLESFFGRSENIMSSFKAQELSMTINAFRRLKITSHNEFNNVFLMQSSKV---NDFTAQSLSTTIFAFGCLGIKPTDEFLDDCFERAV 377
BLAST of EWM29875.1 vs. NCBI_GenBank
Match: gi|324983394|gb|ADY68544.1| (Tab3, partial (chloroplast) [Chlamydomonas reinhardtii]) HSP 1 Score: 70.4774 bits (171), Expect = 1.676e-8 Identity = 44/144 (30.56%), Postives = 66/144 (45.83%), Query Frame = 0 Query: 513 IVQAWSWLKYHPSEATLATLLGQARGMLEDGVFTPLNAGTLIQSLGELRRSPGDAWLSTFCEAAALKFPDMHGKDLNFILKGLAKLNWYPGDAFMVGLLGHMRPYLEGFNGADLQFTMSSIVGLHYLPHRAFLDAFQARFSRLL 656 +V A+ L Y PS+ L + L TP + TL+ SLG P AWL + C AAA P L + GL + P D ++ LG L G++ A+L T+SS+ GL P +++ F AR + ++ Sbjct: 408 LVSAFGSLGYRPSQTWLLSFTRCTAPHLTTYASTPESLPTLLSSLGNTGHRPPPAWLQSACAAAAPHLPSYSSAQLKALAAGLCAMRHLPDDPWVAAYLGASAQLLPGYSAAELTVTISSLAGLGCRPGDEWMEGFYARATAVV 551
BLAST of EWM29875.1 vs. NCBI_GenBank
Match: gi|159468832|ref|XP_001692578.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158278291|gb|EDP04056.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 66.6254 bits (161), Expect = 2.143e-7 Identity = 42/137 (30.66%), Postives = 62/137 (45.26%), Query Frame = 0 Query: 520 LKYHPSEATLATLLGQARGMLEDGVFTPLNAGTLIQSLGELRRSPGDAWLSTFCEAAALKFPDMHGKDLNFILKGLAKLNWYPGDAFMVGLLGHMRPYLEGFNGADLQFTMSSIVGLHYLPHRAFLDAFQARFSRLL 656 L Y PS+ L + L TP + TL+ SLG P AWL + C AAA P L + GL + P D ++ LG L G++ A+L T+SS+ GL P +++ F AR + ++ Sbjct: 284 LGYRPSQTWLLSFTRCTAPHLTTYASTPESLPTLLSSLGNTGHRPPPAWLQSACAAAAPHLPSYSSAQLKALAAGLCAMRHLPDDPWVAAYLGASAQLLPGYSAAELTVTISSLAGLGCRPGDEWMEGFYARATAVV 420 The following BLAST results are available for this feature:
BLAST of EWM29875.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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