EWM22734.1, cds7936 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22734.1 vs. NCBI_GenBank
Match: gi|585103327|gb|EWM22734.1| (hypothetical protein Naga_100209g4 [Nannochloropsis gaditana]) HSP 1 Score: 1128.24 bits (2917), Expect = 0.000e+0 Identity = 548/548 (100.00%), Postives = 548/548 (100.00%), Query Frame = 0
Query: 1 MVRPPSLSEPNVEDNEAPLSHPLSPAQASPPPPSAAGSPLTNDSMFTPSALLAKALLCDDEDDNCSQGNVSAEERMERGKNKGRRSKQHPKLGGQSSLGGSPSAQPSLQTILRQVQPPSTRTGQFHRQQEVKMQRIRGVLLASLSINLVCGFMSATMTGYVTIVLAWGFFARPSPPPSTPSLLGAKDHETSTIYLSWIALFAVALFLIYIACFGIHSARKVSINHLLRYFWGAALGITPLVLVTTFAFDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWCEHYHAGADDCEAIKHAALSQADKWIYFMLLSAGLLGVLNLVSLLVSMHLCVRLITPSVIMTYANDNISYLLLLPAGCCLGISLFLFSHTGFSPDHTWFAWSFLCAAALTLLNSVLTLVGGRLKKRRLLQACLVSNAVVVLLLTGLCATGYIIAGELSDQGSFYTSRRAQDIACKIQLRGCCCCHYSESVPDNRCPEWGTDEVISMIAADFRIASLAALLTILYDFGGLITGFLVMKNLDNYHCEYI 548
MVRPPSLSEPNVEDNEAPLSHPLSPAQASPPPPSAAGSPLTNDSMFTPSALLAKALLCDDEDDNCSQGNVSAEERMERGKNKGRRSKQHPKLGGQSSLGGSPSAQPSLQTILRQVQPPSTRTGQFHRQQEVKMQRIRGVLLASLSINLVCGFMSATMTGYVTIVLAWGFFARPSPPPSTPSLLGAKDHETSTIYLSWIALFAVALFLIYIACFGIHSARKVSINHLLRYFWGAALGITPLVLVTTFAFDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWCEHYHAGADDCEAIKHAALSQADKWIYFMLLSAGLLGVLNLVSLLVSMHLCVRLITPSVIMTYANDNISYLLLLPAGCCLGISLFLFSHTGFSPDHTWFAWSFLCAAALTLLNSVLTLVGGRLKKRRLLQACLVSNAVVVLLLTGLCATGYIIAGELSDQGSFYTSRRAQDIACKIQLRGCCCCHYSESVPDNRCPEWGTDEVISMIAADFRIASLAALLTILYDFGGLITGFLVMKNLDNYHCEYI
Sbjct: 1 MVRPPSLSEPNVEDNEAPLSHPLSPAQASPPPPSAAGSPLTNDSMFTPSALLAKALLCDDEDDNCSQGNVSAEERMERGKNKGRRSKQHPKLGGQSSLGGSPSAQPSLQTILRQVQPPSTRTGQFHRQQEVKMQRIRGVLLASLSINLVCGFMSATMTGYVTIVLAWGFFARPSPPPSTPSLLGAKDHETSTIYLSWIALFAVALFLIYIACFGIHSARKVSINHLLRYFWGAALGITPLVLVTTFAFDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWCEHYHAGADDCEAIKHAALSQADKWIYFMLLSAGLLGVLNLVSLLVSMHLCVRLITPSVIMTYANDNISYLLLLPAGCCLGISLFLFSHTGFSPDHTWFAWSFLCAAALTLLNSVLTLVGGRLKKRRLLQACLVSNAVVVLLLTGLCATGYIIAGELSDQGSFYTSRRAQDIACKIQLRGCCCCHYSESVPDNRCPEWGTDEVISMIAADFRIASLAALLTILYDFGGLITGFLVMKNLDNYHCEYI 548
BLAST of EWM22734.1 vs. NCBI_GenBank
Match: gi|223994719|ref|XP_002287043.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978358|gb|EED96684.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 107.457 bits (267), Expect = 9.861e-21 Identity = 86/346 (24.86%), Postives = 147/346 (42.49%), Query Frame = 0
Query: 213 FGIHSARKVSINHLLRYFWGAALGITPLVLVTTFAFDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWC-EHYHAGADDCEAIKHAALSQADKWIYFMLLSAGLLGVLNLVSLLVSMHLCVRLITPSVIMTYANDNISYLLLLPAGCCLGISLFLF---SHTGFS-PDHTWFAWSFLC-------AAALTLLNSVLTLVGGRLKKRRLLQACLVSNAVVVLLLTGLCATGYIIAGELSDQGSFYTS------RRAQDIACKIQLRGCCCCHYSESVPDNRCPEWGTDEVISMIAADFRIASLAALLTILYDFGGLITGFLVMKNL 540
F + R+V++ +R+ W + + + FD+Y + +++H WD +M R VFC G A +C P+ GG +++S WC E Y G+ +C I++ A + Y S G+ + + + V++ + +IT ++ NI L LP C GI L S+ S D W ++L AA + T++ GR KK V VVV L + T + +A + + S +IAC + G C S V + CPEW D+V ++ + ++ A + ++Y L GFL+ ++L
Sbjct: 445 FAQTAIREVNLVRSVRFMWSLLWLLPVQIFLMIGLFDYYRVMEVWLKHWWDSASMSYFRNVFCEDGT-ADAECTVPIQGGASYNSEDAWCLEKY--GSTECTEIRNEAQTYCTVASYIFFTSNGVWALFLVALMWVTLSVLQAIITVPIVQRSKESNIPLWLTLPIVGCFGIGYILLYGPSNVTVSIQDVYWIGLTYLISGGSFALAALVGYFLQFYTVMNGREKK--------VKQGVVVFFLVTIVVTVFSVATIFAISLIYSLSIVDIPVESFHNIACYLDFGGSCSGCNSNIVAE-ICPEWSQDDVTRVLKTIMKQSATVAAIFLVYALITLRYGFLLFRHL 778
BLAST of EWM22734.1 vs. NCBI_GenBank
Match: gi|1210531551|dbj|GAX09907.1| (hypothetical protein FisN_11Lh108 [Fistulifera solaris]) HSP 1 Score: 74.3294 bits (181), Expect = 2.720e-10 Identity = 70/338 (20.71%), Postives = 140/338 (41.42%), Query Frame = 0
Query: 176 PPSTPSLLGAKDHETSTIYLSWIALFAVALFLIYIACFGIHSARKVSINHLLRYFWGAALGITPLVLVTTFA-FDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWCEHYHAGADDCEAIKHAALSQADKWIYFMLLSAGLLGVLNLVSLLVSMHLCVRLITPSVIMTYANDNISYLLLLPAGCCLGIS-LFLFSHTGFSPDHT------WFAWSFLCAAALTLLNSVL-------TLVGGRLKKRRLLQACLVSNAVVVLLLTGLCATGYIIAGELSDQGSFYTSRRAQDIACKIQLRGCCCCHYSESVPDNRCPE 498
P STP+ + H I + + ++A L+ + + R V++ +RY W L I P+ + + FD++ ++R +++H W +++ R FC + CAA P ++ WC + +C I+ A + DK++ + G++ ++ LL+ + + +I+ ++ N+ LP C+G LF+FS + + W F+ A L L ++L T++ R K+ ++L + V+ + + G IA +S + + +IAC + C + RCP+
Sbjct: 289 PDSTPADIEVLSH-VWNINGAVFTMGSIAFLLLVMTIVIVPVVRSVNLKGAIRYLW-LLLWIIPIQIYSVIGLFDYFRVTRVWVKHWWRDESLATFRRAFCKPSSSYNTLCAA-----PEVENVTSWC-LVNFNVTNCGEIRADAQDKFDKFMIAYYYGNAIWGIVLVLLLLLVVRILESIISRPLVQKSRESNVPAWFSLPILGCIGNGLLFVFSSSSELVNQADRSSTFWVGLLFVAAGGLFFLAAILGWFISSYTILNTRDKRYKMLAVNFFLIIIAVVFILLIWIVGGSIAFSISLVENPLSEEARGNIACFLDQANTCTGCDQDPSDSIRCPD 618
BLAST of EWM22734.1 vs. NCBI_GenBank
Match: gi|1072237887|gb|OEU22614.1| (hypothetical protein FRACYDRAFT_232772 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 73.9442 bits (180), Expect = 3.406e-10 Identity = 50/190 (26.32%), Postives = 87/190 (45.79%), Query Frame = 0
Query: 203 VALFLIYIACFGIHSARKVSINHLLRYFWGAALGITPL-VLVTTFAFDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWC-EHYHAGADDCEAIKHAALSQADKWIYFMLLSAGLLGVLNLVSLLVSMHLCVRLITPSVIMTYANDNISYLLLLPAGC-CLGISLFLFS 389
+AL L++ + ++V + LR+ W L I P+ + FD++ ++ +I+H+W+ + M R +CS G A C P++G P+ S DWC Y+ A C I+ A + W+ S G + + +L+ + R+I+ ++ NI L P C L S FLF+
Sbjct: 356 LALVLLFTCVWTFRIIKEVDLVGALRFLW-ILLWILPVYTFLCIIVFDYHQVTSIWIKHYWNVEQMWWFRKHYCSPGT-AETLCMVPIVGAPDHISEDDWCTSKYNTTA--CTEIRDEAQKETGFWLMVFYRSFASWGYIYMFVMLLIIKSLERIISKPMVQKSREINIVGWLTFPVFCTALFASFFLFA 541
BLAST of EWM22734.1 vs. NCBI_GenBank
Match: gi|397623899|gb|EJK67187.1| (hypothetical protein THAOC_11811 [Thalassiosira oceanica]) HSP 1 Score: 71.2478 bits (173), Expect = 1.921e-9 Identity = 40/159 (25.16%), Postives = 77/159 (48.43%), Query Frame = 0
Query: 184 GAKDHETSTIYLSWIALFAVALFLIYIACFGI----------HSARKVSINHLLRYFWGAALGITPLVLVTTFA-FDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWCEHYHAGADDCEAIKHAA--LSQADKWIYF 329
G D + + + L+++ F+ +++ FG+ + R V++ +R+ W L + P+ + FD+Y+++ +H W M +R ++C +G + GKC P+ GG + S WC+ GA DC +I+++A LS IY+
Sbjct: 430 GVPDDGEDQVPMLTMTLWSLETFVYFLSIFGVILLIACLVAQKAIRNVNLGGNIRFMW-VLLWLLPIQIFCAIGLFDYYNVNYVTTKHRWLSPTMVWVRDLYCEEGT-SNGKCTVPIDGGEGYESEDAWCKANFDGATDCTSIRNSAQNLSNVVSQIYY 586
BLAST of EWM22734.1 vs. NCBI_GenBank
Match: gi|301101906|ref|XP_002900041.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102616|gb|EEY60668.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 64.3142 bits (155), Expect = 1.774e-7 Identity = 71/279 (25.45%), Postives = 115/279 (41.22%), Query Frame = 0
Query: 226 LLRYFWGAALGITPLVLVTTFAFDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWCEHYHAGADDCEAIKHAALSQADKWIYFMLLSAGLLGVLNLVSLLVSMHLCVRLITPSVIM--TYANDNISYLLLLPAGCCLGISLFLFS-----HTGFSPDHTWFAWSFLCAAALTLLNSVLTLVGGRLKKRRLLQACLV--SNAVVVLLLTGLCATGYIIAGELSDQ-GSFYTSRRAQDIACKIQLRGCCCCH--YSESVP 492
LL +F+ L +T L + AF F D S+++HHW + LR +C CA +S D+ EH +++ G +GV ++ ++ SM VR++T ++M + N+++ L LG LF+F H + W A F+ L + SVL ++G R K R LL ++ + +V LL+ + A + SD S Y + + +AC I L GC C SE +P
Sbjct: 67 LLIFFFVNFLLVTGLFVACYTAFFFQDALESWVKHHWTANVLAALRDSWC---------CA-------TYSDAVDYLEHR-------------------------VVAIGAIGVACMLLVIASMFCVVRIVTVPIVMRSMLSVMNVAFTL-------LGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMIALSVLGIIGSRSKSRSLLLIYIIGLGSCLVALLVCSVSAFSF------SDHLASTYNAHTSSTLACDINLSGCTNCTDVTSEMIP 291
BLAST of EWM22734.1 vs. NCBI_GenBank
Match: gi|298714235|emb|CBJ27371.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 62.003 bits (149), Expect = 1.882e-7 Identity = 40/150 (26.67%), Postives = 71/150 (47.33%), Query Frame = 0
Query: 407 AAALTLLNSVLTLVGGRLKKRRLLQACLVSNAVVVLLLTGLCATGYIIAGELSDQGSFYTSRRAQDIACKIQLRGCCCCHYS-------ESVPDNRCPEWGTDEVISMIAADF-RIASLAALLTILYDFGGLITGFLVMKNLDNYHCEYI 548
AL L+ +V+ ++ G L+ LLQ + V++L L G + L+D IAC++ + GCCCC Y+ +VP CPEW + ++ +A F ++ L +++++++ GL + NL Y +YI
Sbjct: 42 VGALLLVVAVMGVLAGHLRHHLLLQVYMAGLGAVLMLYLVLITLGLVSWARLADGFDPDDPEGLVRIACEVGVHGCCCCRYTPELDFSLYTVPG--CPEWSDPKELAQVAIVFVKLGLLTSVMSVVFVLCGLWASVMFHNNLKGYQVDYI 189
BLAST of EWM22734.1 vs. NCBI_GenBank
Match: gi|568059784|gb|ETM56350.1| (hypothetical protein L914_00655 [Phytophthora parasitica]) HSP 1 Score: 62.7734 bits (151), Expect = 6.662e-7 Identity = 67/279 (24.01%), Postives = 113/279 (40.50%), Query Frame = 0
Query: 226 LLRYFWGAALGITPLVLVTTFAFDFYDISRSFIRHHWDGKAMEGLRLVFCSQGAEAGGKCAAPVLGGPNFSSIQDWCEHYHAGADDCEAIKHAALSQADKWIYFMLLSAGLLGVLNLVSLLVSMHLCVRLITPSVIMTYANDNISYLLLLPAGCCLGISLFLFS-----HTGFSPDHTWFAWSFLCAAALTLLNSVLTLVGGRLKKRRLLQACLV--SNAVVVLLLTGLCATGYIIAGELSDQ-GSFYTSRRAQDIACKIQLRGCCCC--HYSESVPDN 494
LL +F+ L +T L + AF F D S+++HHW + LR C C Y S+A ++ + +++ G +GV ++ ++ SM+ VR++T +IM ++ + L LG LF+F H + W A F+ L + SVL +G + K R LL ++ + ++ LL+ + A + SD S Y + + +AC I L GC C +E +P N
Sbjct: 81 LLIFFFVNFLLVTGLFVACYTAFFFQDALESWVKHHWTANVLAALRDSSC--------------------------CATY---------------SEAVDYLEYRVVAIGAIGVACMLLVIASMYCVVRIVTVPIIMRSMLSVMNAIFTL-----LGTGLFIFGLSVKVHDEMTSGQRWIAIIFIVVGTLMVALSVLGFIGSKSKSRSLLLIYIIGLGSCLIALLVCSVSAFSF------SDHLASTYNAHTSSTLACDINLSGCTNCTDMATEIIPCN 307 The following BLAST results are available for this feature:
BLAST of EWM22734.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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