EWM22750.1, cds7918 (CDS) Nannochloropsis gaditana

Overview
NameEWM22750.1
Unique Namecds7918
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:164314..166032 +
Alignment locationKK037247.1:166200..166393 +
Alignment locationKK037247.1:166611..166736 +
Alignment locationKK037247.1:166917..167022 +
Alignment locationKK037247.1:167290..167436 +
Alignment locationKK037247.1:167603..167638 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22750.1
Productatp-binding cassette sub-family b member mitochondrial
Orig transcript idgnl|cribi|Naga_100143g1.3779.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:164314..166032 +
KK037247.1supercontigKK037247.1:166200..166393 +
KK037247.1supercontigKK037247.1:166611..166736 +
KK037247.1supercontigKK037247.1:166917..167022 +
KK037247.1supercontigKK037247.1:167290..167436 +
KK037247.1supercontigKK037247.1:167603..167638 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005215transporter activity
GO:0000166nucleotide binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR011527ABC1_TM_dom
IPR027417P-loop_NTPase
IPR003439ABC_transporter-like
IPR003593AAA+_ATPase
Homology
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|585103349|gb|EWM22750.1| (atp-binding cassette sub-family b member mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 1587.39 bits (4109), Expect = 0.000e+0
Identity = 775/775 (100.00%), Postives = 775/775 (100.00%), Query Frame = 0
Query:    1 MISRTLKGARHTRCIRSYLSSVFFQHHYPQVVPLIIRGAQNLSTLPGTPSSASINLRSTTSTSHVPSEKSTLVVPDPSPPSRPARKTFQHFLALARPETPAFLTALAAVAVGTGTTVVFPFAIGKCMDAMALGNTKQLVDRSKGTADGTLPAIDTTAAHLSMNASEFIEASFGPGVIPAWVMDLIPPDAAPLSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQLKAAPTM 775
            MISRTLKGARHTRCIRSYLSSVFFQHHYPQVVPLIIRGAQNLSTLPGTPSSASINLRSTTSTSHVPSEKSTLVVPDPSPPSRPARKTFQHFLALARPETPAFLTALAAVAVGTGTTVVFPFAIGKCMDAMALGNTKQLVDRSKGTADGTLPAIDTTAAHLSMNASEFIEASFGPGVIPAWVMDLIPPDAAPLSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQLKAAPTM
Sbjct:    1 MISRTLKGARHTRCIRSYLSSVFFQHHYPQVVPLIIRGAQNLSTLPGTPSSASINLRSTTSTSHVPSEKSTLVVPDPSPPSRPARKTFQHFLALARPETPAFLTALAAVAVGTGTTVVFPFAIGKCMDAMALGNTKQLVDRSKGTADGTLPAIDTTAAHLSMNASEFIEASFGPGVIPAWVMDLIPPDAAPLSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQLKAAPTM 775          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|553191328|ref|XP_005855362.1| (atp-binding sub-family b (mdr tap) member 10, partial [Nannochloropsis gaditana CCMP526] >gi|422293696|gb|EKU20996.1| atp-binding sub-family b (mdr tap) member 10, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 436.802 bits (1122), Expect = 1.484e-146
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
Query:  248 GTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRG 459
            GTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRG
Sbjct:    1 GTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRG 212          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|1083310966|ref|XP_018605150.1| (PREDICTED: ATP-binding cassette sub-family B member 10, mitochondrial [Scleropages formosus])

HSP 1 Score: 414.846 bits (1065), Expect = 1.509e-132
Identity = 228/577 (39.51%), Postives = 350/577 (60.66%), Query Frame = 0
Query:  192 LSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQ 768
            L+ L A L GVF+ GA A  +R   +  +G++I  +LR+ +F+S++ Q L FFD++ TGE++NRLS D  ++  +++++ S  LR  AQ    +GMM Y SP L A +L V+PP+    V +G+ +R +SK+  D LA A  +AEERI N+RTVRA G +  EV +YA ++N VF +AK +++MQ  +YG+   +GN+ ++ VLY GG  +    +T+G LS+ L+Y+ + G S++ L S+Y +LMK  G+  R+++LL+ +   S                EG  + T  Q+RG L F  VSFAYPTR + PIFQ LDL VR    +A+VGPSGSGKS++  L+ R+Y+P++G I+     V  + +    LR+ I  V+Q+ +LFS S+ +N+  G PD  +              +  QE                      +  A R AN   F++ + +GFDTV+GE+G  LSGGQ+ R+A+ARA+L++  +LLLDE ++ALD+ +E  +  ALER+++NRT L+IAHR S++Q AD +AVL  G+++E G   +LL+ S    FRRL+E Q
Sbjct:   51 LTSLCAMLSGVFLTGAAANAIRIYLIQTSGQQIVRKLRESLFSSILRQELGFFDKTRTGELINRLSADTARLGHSVTDNLSDGLRAVAQATAGVGMMFYVSPNLAAFVLMVVPPMTGLAVVYGRYLRSISKRTQDALAEATQLAEERIGNLRTVRAFGKELTEVEKYAEKVNYVFSLAKKEAVMQAGFYGLMGLNGNMMVLAVLYKGGLLMGSEHMTMGQLSSFLMYTFWVGVSVAGLSSFYSELMKGLGAGTRLWELLDRKPEFSL--------------TEGLELST-DQLRGELAFRNVSFAYPTRKEAPIFQHLDLLVRAGSVMAVVGPSGSGKSTLVSLLLRLYDPDSGMITIDGHDV--KDLSPYWLRRHIGTVSQEPILFSCSIAENIAYGAPDPSA--------------ITSQE----------------------IHHAARMANAYDFVQGFPNGFDTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENELLVQEALERLMQNRTVLIIAHRLSTVQSADAVAVLDQGRVVECGQRAELLANS-KGHFRRLMEKQ 573          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|503701650|ref|WP_013935726.1| (ABC transporter permease [Myxococcus fulvus] >gi|337256394|gb|AEI62554.1| efflux ABC transporter permease/ATP-binding protein [Myxococcus fulvus HW-1])

HSP 1 Score: 409.453 bits (1051), Expect = 2.330e-130
Identity = 235/571 (41.16%), Postives = 344/571 (60.25%), Query Frame = 0
Query:  202 VFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQLKAA 772
            VFVV  +A  +R    + AGER+ +RLRK +F +++ Q + FFD   TGE+ +RLS+D T +  T++ + S  LR      G +G++LYTS QL  +ML VIPPVA+ GVF+G++VR +S+Q  D LA +G +AEE +S IRTVR+   +  EV RY+  +   F +AK ++L   I+ GVA  +G   +  VL+FGG+ V +G ++VG+L++ L+Y++   FS S +   + D M+A+G+AER+F+LL  ++ P+ G               G    T   +RG + F GV FAYPTRPD P+ Q LDLE+R  E +A+VGPSG+GKS++A L++R Y+P AG +       PL ++  E LR++I  V Q+  LFS S+ DN+  G PD   +                                        V EA R AN  A+IE++ DG++T +GERG QLSGGQ+ R+A+ARA+L+D  +L+LDE ++ALD+ SE  +  ALER++K RTTL+IAHR S++  ADR+ VL  G +I+ GT   L+S      +RRLVE Q  AA
Sbjct:   79 VFVVQGIAMALRIYLFNTAGERVVSRLRKDLFRALLSQEVGFFDTRRTGELTSRLSSDTTVLQNTVTTNVSMILRYGVTALGGVGLLLYTSVQLTLVMLAVIPPVAIGGVFYGRRVRVISRQAQDALAASGEVAEEDLSGIRTVRSFAAERHEVERYSVAVERSFTLAKKRALQSSIFMGVASIAGYGSIAAVLWFGGRLVVDGGLSVGELTSFLIYTMLVAFSFSGIAELWADFMRASGAAERVFELL--DRAPAIG--------------AGGEQLT--DLRGHVRFRGVHFAYPTRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPRAGEVLLDGH--PLTALEPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQ---------------------------------------VEEAARAANAHAYIERFPDGYNTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVANADRVLVLDGGAVIQSGTHASLMSQ--EGLYRRLVERQFVAA 588          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|754341939|ref|XP_004365108.2| (ATP-binding cassette sub-family B member 10 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 409.068 bits (1050), Expect = 8.982e-130
Identity = 219/576 (38.02%), Postives = 347/576 (60.24%), Query Frame = 0
Query:  199 LVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTP--SRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQLKAA 772
            L+GVF+VGA A + R   +  AG+ I ARLR+ +F+S++ Q +AFFDR+ TGEV+NRL+ D   V K ++++ S  LR+ A     +GMM + SP+L  ++LG++PPV +  V +G+ V+ L++Q+ D LANA  +AEERISNIRTVRA   +  EV RY   +  V+ +   +   +GI++G    +GNL MV++L++GG  +    ITVG L++ LLYS Y G ++  L  +Y +LM+  G++ER++ +L+++ T   S G   P     G +D                 F+ V+FAYPTRPD P+F++L L V + + LA+VG SG GKS++  L+ R+Y+P++G I    +   +  +    +R+ I  V+Q+ VLFSG+V +N+  G P                                          + ++++A   AN   FI ++ +GF+T++GERG  LSGGQR R+A+ARA+L++  +L+LDE ++ALD+ SE  +  ALER+++ R+ + IAHR S+I+ AD IAVLG+G+++E GT  +L++   +  FR+LVE Q  +A
Sbjct:   99 LIGVFLVGAAANYGRIVMIQNAGQSIVARLRQNLFSSIMRQDVAFFDRNQTGEVINRLAADTVVVGKAVTDNVSDGLRSVASAVVGIGMMAFMSPKLTLVVLGIVPPVCIVAVLYGRYVKRLTRQVQDSLANATQVAEERISNIRTVRAFAKEPEEVKRYDGHVQTVYSLGIQEGKARGIFHGATGLAGNLMMVSLLWYGGHMMVTNEITVGTLTSFLLYSAYVGVAVIGLSQFYSELMRGLGASERLWTILDSKPTIPLSEGHKIPHDRFFGKID-----------------FQNVAFAYPTRPDAPVFKNLSLTVPDGKILAVVGTSGGGKSTVGALLLRLYDPDSGNILI--DNYNVRELDASWMRQQIGLVSQEPVLFSGTVAENIAYGHPS---------------------------------------ATIEQIQDAAVQANAHRFITEFPEGFNTIVGERGQSLSGGQRQRIAIARALLKNPRILILDEATSALDAQSEHLVQEALERLMQGRSVITIAHRLSTIRNADTIAVLGNGEVVESGTYAELMALP-DGQFRKLVERQTISA 615          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|1087651093|emb|SDD35074.1| (ATP-binding cassette, subfamily B [Myxococcus virescens])

HSP 1 Score: 404.445 bits (1038), Expect = 1.817e-128
Identity = 248/686 (36.15%), Postives = 370/686 (53.94%), Query Frame = 0
Query:   87 TFQHFLALARPETPAFLTALAAVAVGTGTTVVFPFAIGKCMDAMALGNTKQLVDRSKGTADGTLPAIDTTAAHLSMNASEFIEASFGPGVIPAWVMDLIPPDAAPLSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQLKAA 772
            T +  L LARPE          + + +G T+ +P AIG  +D       + +VDR                                                     L+  ++ VF V  +A  +R      AGER+ +RLRK +F +++ Q + FFD   TGE+ +RLS+D T +  T++ + S  LR      G +G++LYTS QL  +ML VIPPVA+ GVF+G++VR +S+Q  D LA +G +AEE +S IRTVR+   +  EV RY+  +   F +AK ++L   ++ GVA  +G   +  VL++GG+ V EG ++VG+L++ L+Y++   FS S +   + D M+A+G+AER+F+LL  ++ P+ G               G    T+  +RG + F GV FAYP+RPD P+ Q LDLE+R  E +A+VGPSG+GKS++A L++R Y+P  G +       PL S+  E LR++I  V Q+  LFS S+ DN+  G P    +                                        V EA R AN  A+IE++ +G+ T +GERG QLSGGQ+ R+A+ARA+L+D  +L+LDE ++ALD+ SE  +  ALER++K RTTL+IAHR S++  ADR+ VL  G +I+ GT   L+S      +RRLVE Q  AA
Sbjct:   17 TVRRLLKLARPELLPLAAGTLFLLISSGATLAYPRAIGDLVDQALTARDRYVVDR-----------------------------------------------------LALMMLAVFTVQGIAMALRIYLFTNAGERVVSRLRKDLFRALLSQEVGFFDSRRTGELTSRLSSDTTVLQTTVTANVSMMLRYVVTALGGVGLLLYTSVQLTLVMLAVIPPVAIGGVFYGRRVRVISRQAQDALAASGEVAEEDLSGIRTVRSFAAERHEVERYSVAVERSFMLAKKRALQTSVFMGVASIAGYGSIAAVLWYGGRLVVEGGLSVGELTSFLIYTMLVAFSFSGIAELWADFMRASGAAERVFELL--DRKPAIG--------------AGGEQLTY--LRGHVQFRGVHFAYPSRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQNGEVLLDGH--PLTSLEPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPGATDAQ---------------------------------------VEEAARAANAHAYIERFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVANADRVLVLDGGLVIQSGTHASLMSQ--EGLYRRLVERQFVAA 588          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|632953859|ref|XP_007892652.1| (PREDICTED: ATP-binding cassette sub-family B member 10, mitochondrial, partial [Callorhinchus milii])

HSP 1 Score: 403.675 bits (1036), Expect = 7.812e-128
Identity = 229/594 (38.55%), Postives = 362/594 (60.94%), Query Frame = 0
Query:  181 VMDLIPPDA------APLSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQ 768
            V+DLI  +         L+ L A L GVF+ GA A   R   +H++ ++I  RLR  +F+S++ Q + FFD+S TGE++NRLS+D   + ++++ + S  LR  AQ A  +GMM Y SPQL   +LG++PP+A++ VF+G+ +R L+K   + LA A  +AEERI NIRTVRA G + +E+ +Y  +++ V ++A+ +++   +++G    +GNL +++VLY GG  +S   +T+G+LS+ ++Y+ + G SI+ L S+Y  LMK  G+ +R+++LL+ +         P   L      EG  +++  Q +G + F GV FAYPTR + PIFQ LDL +     +A+VGPSGSGKS++  L+ R+Y+P +G I+       +  +    LRK+I  V+Q+ VLFS S+ +N+  G   ++ S LS+ D                                  +  A + AN   FIE + +GF+TV+GE+G  LSGGQ+ R+A+ARA+L++  +LLLDE ++ALDS +E  +  AL+R+++ RT L+IAHR S+IQ  + +AVL  G+IIE GT ++LL+ S N  FR+LVE Q
Sbjct:   61 VIDLIYTNTTGGDLTGSLTTLCAMLSGVFLCGAAANTARVYIMHISEQQIIKRLRTSLFSSILCQEVGFFDKSSTGELINRLSSDADLLGRSVTVNLSDGLRAVAQAAAGVGMMFYVSPQLAMFVLGIVPPLALFSVFYGRYIRKLTKLTQNSLAGATQLAEERIGNIRTVRAFGKENVELEKYTEKIDYVVQLARKEAVALAVFFGATGLTGNLIILSVLYKGGLLMSTAHMTIGELSSFMMYAFWVGISITGLSSFYSTLMKGLGAGDRLWELLDRK---------PAMPL-----NEGIVLQS-DQFKGAIKFLGVHFAYPTRKESPIFQGLDLSIPAGSIMAVVGPSGSGKSTLVSLLLRLYDPTSGAITLDDHDTRI--LNPYWLRKNIGTVSQEPVLFSCSIAENIAYG--AVDPSQLSMKD----------------------------------IENAAKIANAFNFIESFPEGFETVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDSENEYLVQQALDRLMEGRTVLIIAHRLSTIQNTNAVAVLDQGRIIECGTHKELLANS-NGLFRKLVEKQ 600          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|499870483|ref|WP_011551217.1| (ABC transporter permease [Myxococcus xanthus] >gi|108466152|gb|ABF91337.1| efflux ABC transporter, permease/ATP-binding protein [Myxococcus xanthus DK 1622] >gi|1089566049|emb|SDW45482.1| ATP-binding cassette, subfamily B [Myxococcus xanthus])

HSP 1 Score: 402.519 bits (1033), Expect = 1.287e-127
Identity = 246/686 (35.86%), Postives = 369/686 (53.79%), Query Frame = 0
Query:   87 TFQHFLALARPETPAFLTALAAVAVGTGTTVVFPFAIGKCMDAMALGNTKQLVDRSKGTADGTLPAIDTTAAHLSMNASEFIEASFGPGVIPAWVMDLIPPDAAPLSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQLKAA 772
            T +  L LARPE          + + +G T+ +P AIG  +D       + +VDR                                                     L+  ++ VF V  +A  +R      AGER+ +RLRK +F +++ Q + FFD   TGE+ +RLS+D T +  T++ + S  LR      G +G++LYTS QL  +ML VIPPVA+ GVF+G++VR +S+Q  D LA +G +AEE +S IRTVR+   +  EV RY+  +   F +AK ++L   ++ GVA  +G   +  VL++GG+ V EG ++VG+L++ L+Y++   FS S +   + D M+A+G+AER+F+LL+                K A+   G ++     +RG + F GV FAYP+RPD P+ Q LDLE+R  E +A+VGPSG+GKS++A L++R Y+P  G +       PL ++  E LR++I  V Q+  LFS S+ DN+  G P    +                                        V EA R AN  A+IE++ +G+ T +GERG QLSGGQ+ R+A+ARA+L+D  +L+LDE ++ALD+ SE  +  ALER++K RTTL+IAHR S++  ADR+ VL  G +I+ GT   L+S      +RRLVE Q  AA
Sbjct:   17 TVRRLLKLARPELLPLAAGTLFLLISSGATLAYPRAIGDLVDQALTARDRYVVDR-----------------------------------------------------LAMLMLAVFTVQGIAMALRIYLFTNAGERVVSRLRKDLFRALLSQEVGFFDSRRTGELTSRLSSDTTVLQTTVTANVSMMLRYVVTALGGVGLLLYTSVQLTLVMLAVIPPVAIGGVFYGRRVRVISRQAQDALAASGEVAEEDLSGIRTVRSFAAERHEVERYSVAVERSFTLAKKRALQTSVFMGVASIAGYGSIAAVLWYGGRLVVEGGLSVGELTSFLIYTMLVAFSFSGIAELWADFMRASGAAERVFELLDR---------------KPAIGAGGEQLT---DLRGHVQFRGVHFAYPSRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQNGEVLLDGH--PLTALEPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPGATDAQ---------------------------------------VEEAARAANAHAYIERFPEGYGTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMKGRTTLIIAHRLSTVANADRVLVLDGGVVIQSGTHASLMSQ--EGLYRRLVERQFVAA 588          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|926631513|ref|XP_013781488.1| (PREDICTED: ATP-binding cassette sub-family B member 10, mitochondrial-like [Limulus polyphemus])

HSP 1 Score: 395.586 bits (1015), Expect = 6.411e-124
Identity = 234/691 (33.86%), Postives = 377/691 (54.56%), Query Frame = 0
Query:   79 PPSRPARKTFQHFLALARPETPAFLTALAAVAVGTGTTVVFPFAIGKCMDAMALGNTKQLVDRSKGTADGTLPAIDTTAAHLSMNASEFIEASFGPGVIPAWVMDLIPPDAAPLSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLE-TEKTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQ 768
            PPS   R      L LA+PE      A+  + V +  T+ FPF +GK +D +   +  ++ ++                                                  L+++   L  VF VG  A F R   ++ +G+R+  RLR+ ++ SV+ Q +AFFDR+ TGE++NRLS D + V  +++ + S  LR+       + MM+YTSP+L  + L  +PPVA   + +G+ +R+++K + D LA++  +AEE ISNIRTVRA   +E E  RY  +++ + ++ K +SL + I++G A   GNL ++TVLY+GG  ++E  +TVGDLS  L+Y+ Y G SI  L S++ +LM+A G++ R++++++     P  G + PT                    +G + F  ++F YP RP+  IF  L+L +     LA+VG SGSGKS++A +V R Y+P +G ++   + + + ++  E LR+ +++V Q+ VLFS S+++N+  G  + +S     DD      ++E  E           NAWN                   FI+Q+ +  +T++GERG  LSGGQ+ R+A+ARA+++D  +LLLDE ++ALD+ SE  +  ALER+++ RT + IAHR S+I+ ADRIAVL + +I EIGT  +L+    N  FR LVE Q
Sbjct:   86 PPSELKR-----LLQLAKPEKWRLTGAVILLIVSSAVTMAFPFCLGKIIDIIYTSSPSEMKEK--------------------------------------------------LTLICQILAVVFFVGGAANFGRVYLMNYSGQRVINRLRRILYDSVLKQEVAFFDRTKTGEIINRLSADTSLVGWSITMNISDGLRSSVSVVAGISMMVYTSPELALVGLVTVPPVAGLAIVYGRYLRNITKALQDSLADSTQVAEEYISNIRTVRAFAQEEQESHRYGKKISVILQLTKKESLARAIFFGSAGFCGNLVVLTVLYYGGLMMTEAHLTVGDLSAFLMYAAYVGISIGGLSSFFSELMRALGASTRLWEIVDRAPAIPLTGGLKPT------------------AFKGDIEFHDLTFCYPNRPNVVIFDKLNLSIPAGSVLAVVGRSGSGKSTVAAMVLRFYDPTSGTVTL--DGIDIRTLSPEWLRRHVAFVNQEPVLFSTSIKENIIYGCFN-QSGKEICDD-----LVIEAAEQ---------ANAWN-------------------FIQQFPEKLNTLVGERGVMLSGGQKQRIAIARALIKDPKILLLDEATSALDAHSEYLVQEALERLMRGRTVITIAHRLSTIRNADRIAVLHERRIAEIGTYNELMYKE-NGLFRNLVEKQ 666          
BLAST of EWM22750.1 vs. NCBI_GenBank
Match: gi|759698116|ref|WP_043414028.1| (ABC transporter permease [Archangium violaceum])

HSP 1 Score: 383.259 bits (983), Expect = 3.878e-120
Identity = 247/700 (35.29%), Postives = 374/700 (53.43%), Query Frame = 0
Query:   77 PSPPSRP--ARKTFQHFLALARPETPAFLTALAAVAVGTGTTVVFPFAIGKCMD-AMALGNTKQLVDRSKGTADGTLPAIDTTAAHLSMNASEFIEASFGPGVIPAWVMDLIPPDAAPLSVLSAGLVGVFVVGALATFVRNTTVHVAGERIAARLRKRVFASVVHQRLAFFDRSGTGEVMNRLSNDVTQVAKTLSEDTSYFLRNFAQGAGALGMMLYTSPQLCAIMLGVIPPVAVWGVFFGKKVRDLSKQMVDELANAGSIAEERISNIRTVRALGNDELEVGRYAHQMNNVFRVAKHKSLMQGIYYGVAMGSGNLGMVTVLYFGGQYVSEGLITVGDLSTMLLYSVYAGFSISALLSYYGDLMKAAGSAERIFDLLETE-KTPSRGRVTPTQVLKGAMDKEGSRMKTWPQVRGPLIFEGVSFAYPTRPDFPIFQDLDLEVRENETLALVGPSGSGKSSIAGLVTRMYEPNAGRISFGPERVPLESVPKEHLRKSISYVTQDAVLFSGSVRDNLFLGFPDIESSHLSVDDGLNLFPLLEKQEPFTFGHGVQGGNAWNMEERMSRVREACRTANCLAFIEQWEDGFDTVIGERGAQLSGGQRARLALARAILRDSHVLLLDEISAALDSVSEAALHTALERVLKNRTTLLIAHRWSSIQIADRIAVLGDGKIIEIGTPQDLLSTSYNSAFRRLVEHQLKAA 772
            P  P +P  +R T    ++LARP+    +  +A + + +G  +V+P AIG  +D A+  G      DRS+         IDT A  L+M                                       VF++  +A  +R      AGER+  +LR+ +FAS++ Q + FFD   TGE+ NRL++D T +   +S + S  LRN AQ  G + ++LYTSP L  +ML ++P VAV  V +G++VR LSKQ  D LA A  +AEE +S IRTVR+   +  EV RY       + VA+ +     I+   A  +  L    VL++GG+ V +G +TVG+L++ L+YS+   F++ AL   + D M+A G+AER+F+L++ +   PS G               G R+ +   V+G + F+ V FAYPTRPD P+ Q +DL++   E +A+VGPSG+GKS+IAGL+ RMY+P  GR+       PL ++  E LR+ I  V Q+ +LF+ S+ DN+  G                                        M+     +  A R AN   FI ++ +G+ T++GERG QLSGGQ+ R+A+ARA+L++  +L+LDE ++ALD+ SE  +  AL+R++K RTTL+IAHR S++  ADR+ VL  GK+++ G    L+       +RRLVE Q  AA
Sbjct:    8 PEAPKKPKFSRVTVSRIVSLARPQARRIMGGIAFLLIASGLMLVYPKAIGDIIDQAIKAG------DRSR---------IDTIA--LTMGV-------------------------------------VFILQGVAMALRFYLFTTAGERVVTQLRQDLFASLMSQEVGFFDERKTGELTNRLASDTTVLQNAVSVNISMGLRNAAQAVGGIALLLYTSPVLTGLMLAIVPAVAVGAVTYGRRVRGLSKQTQDALATANEVAEEGLSGIRTVRSFAAERHEVERYRTATERAYDVARRRVGQSAIFMAAASAASYLASAVVLWYGGRLVLDGKMTVGNLTSFLIYSLMVAFALGALTDLWADFMRAVGAAERVFELVDRQPAIPSSG---------------GERLAS---VQGRVEFQQVRFAYPTRPDVPVLQGIDLKLDPGEVVAIVGPSGAGKSTIAGLLARMYDPQGGRLQLDGH--PLSALDPEWLRQQIGTVAQEPMLFASSIEDNIRYG---------------------------------------RMDATQEEIEAAARAANAHEFITRFPEGYRTLVGERGVQLSGGQKQRIAIARAMLKNPRLLVLDEATSALDAESEHLVQEALDRLMKGRTTLIIAHRLSTVIGADRVLVLEGGKVVQSGNHAALMGQ--EGLYRRLVERQFVAA 592          
The following BLAST results are available for this feature:
BLAST of EWM22750.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103349|gb|EWM22750.1|0.000e+0100.00atp-binding cassette sub-family b member mitochond... [more]
gi|553191328|ref|XP_005855362.1|1.484e-146100.00atp-binding sub-family b (mdr tap) member 10, part... [more]
gi|1083310966|ref|XP_018605150.1|1.509e-13239.51PREDICTED: ATP-binding cassette sub-family B membe... [more]
gi|503701650|ref|WP_013935726.1|2.330e-13041.16ABC transporter permease [Myxococcus fulvus] >gi|3... [more]
gi|754341939|ref|XP_004365108.2|8.982e-13038.02ATP-binding cassette sub-family B member 10 [Capsa... [more]
gi|1087651093|emb|SDD35074.1|1.817e-12836.15ATP-binding cassette, subfamily B [Myxococcus vire... [more]
gi|632953859|ref|XP_007892652.1|7.812e-12838.55PREDICTED: ATP-binding cassette sub-family B membe... [more]
gi|499870483|ref|WP_011551217.1|1.287e-12735.86ABC transporter permease [Myxococcus xanthus] >gi|... [more]
gi|926631513|ref|XP_013781488.1|6.411e-12433.86PREDICTED: ATP-binding cassette sub-family B membe... [more]
gi|759698116|ref|WP_043414028.1|3.878e-12035.29ABC transporter permease [Archangium violaceum][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7940rna7940Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications