EWM22764.1, cds7911 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|585103366|gb|EWM22764.1| (chromatin associated protein kti12 [Nannochloropsis gaditana]) HSP 1 Score: 317.39 bits (812), Expect = 1.057e-109 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0 Query: 1 MARAETTQHCVVWVALEHQHVARAWNESREDRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154 MARAETTQHCVVWVALEHQHVARAWNESREDRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR Sbjct: 1 MARAETTQHCVVWVALEHQHVARAWNESREDRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|390354557|ref|XP_001180236.2| (PREDICTED: protein KTI12 homolog [Strongylocentrotus purpuratus]) HSP 1 Score: 94.3597 bits (233), Expect = 1.279e-20 Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 2 ARAETTQHCVVWVALEHQHVARAWNESRED--RYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154 ++ T HCV++ + VA WN RED +Y E+FD L RFEAPV NRWD PL +P DE+ Q++ A+ KAP LST + P + + L+ LD+ TQ +++++ QKTS+PGD I++P A+ V R Sbjct: 95 VKSSQTPHCVIFCDTPVE-VATTWNSEREDQEKYTKEIFDGLVMRFEAPVSKNRWDSPLFSIAPS----------------DELPCQEIYDALFLRKAPPRNLSTVSQPLSATNFLYELDKRTQEAVTTLMSAQKTSIPGDDISIPGAKDKVHLAR 233
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|585664194|ref|XP_006811965.1| (PREDICTED: protein KTI12 homolog [Saccoglossus kowalevskii]) HSP 1 Score: 93.2041 bits (230), Expect = 3.815e-20 Identity = 55/152 (36.18%), Postives = 85/152 (55.92%), Query Frame = 0 Query: 1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPV 150 ++++ T HCV+ L A AWN+ RE ++Y E+FD L RFEAP NRWD PL ++ P S+ E + AI + KAP ST + P + + L+ LD++TQ +++ +LE QKTS+PGD I++P+A+ + Sbjct: 94 VSKSAKTTHCVIHCELA-VDTASAWNKEREKTEQYSQEIFDALVMRFEAPDSRNRWDSPL--FTILPDSDVPCE-------------AICDAIFDRKAPPPNFSTQSQPLSSTNFLYELDKITQDVITVLLEAQKTSVPGDQISIPDAKDKI 229
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|1025335184|ref|XP_016390603.1| (PREDICTED: protein KTI12 homolog [Sinocyclocheilus rhinocerous]) HSP 1 Score: 89.3521 bits (220), Expect = 1.224e-18 Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 0 Query: 1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154 + + T HC+V+ L V+ WN+ RE RY E+ D L RFEAP NRWD PL D + ++ + A+ + KAP ST P + + L+ LD+VTQ +L ++LE QKTS+PGD+I++P A + F R Sbjct: 94 LIKHTQTPHCLVY-CLTSTDVSSEWNKGREADSRYTQEILDALILRFEAPDSRNRWDSPLFTIQ----------------QEDSLPFEAICDALFKRKAPPPNQSTKNQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGDLISIPGATEKIEFTR 233
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|808867563|gb|KKF18093.1| (Protein KTI12 [Larimichthys crocea]) HSP 1 Score: 88.5817 bits (218), Expect = 2.351e-18 Identity = 52/156 (33.33%), Postives = 82/156 (52.56%), Query Frame = 0 Query: 1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV--YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCF 152 + + T HC+V+ L + WN +R+ ++Y ++FD L RFEAP NRWD PL +D+ Y+ + A+ + KAP A ST + P + A+ L+ LD++TQ +L ++ QKTS+PGD+I+VP A + F Sbjct: 94 LIKHAQTPHCLVY-CLTSDDESSTWNTNRDAAEQYTKDIFDALVLRFEAPDSRNRWDNPLFTI-----------------LKDDTLPYEAISDALFKRKAPPANQSTQSQPLSSANFLYELDKITQEVLMAVFNAQKTSVPGDLISVPGATEKISF 231
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|966648061|gb|KTF82971.1| (hypothetical protein cypCar_00026712 [Cyprinus carpio]) HSP 1 Score: 87.4261 bits (215), Expect = 3.440e-18 Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 0 Query: 1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCF 152 + + T HC+V+ L V+ WN+ RE RY E+ D L RFEAP NRWD PL ++E ++ + A+ + KAP ST P + + L+ LD+VTQ +L ++LE QKTS+PGD+I++P A + F Sbjct: 92 LIKHTQTPHCLVY-CLTSADVSSEWNKGREADSRYKQEILDALILRFEAPDSRNRWDSPLFTI----------QQEDLLP-----FEAICDALFKRKAPPPNQSTKNQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGDLISIPGATEKISF 229
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|831313038|ref|XP_012689039.1| (PREDICTED: protein KTI12 homolog isoform X2 [Clupea harengus]) HSP 1 Score: 87.0409 bits (214), Expect = 4.255e-18 Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 7 TQHCVVWVALEHQHVARAWNESRED--RYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEA 146 T HC+V+ L V+ WN SRE +Y E+ D L RFEAP NRWD PL + +KE ++ + AI + KAP ST + P + L+ LD+VTQ +L +IL+ QKTS+PGD+I +P A Sbjct: 100 TPHCLVY-CLTSAEVSSGWNRSRESGAQYTQEILDALVLRFEAPDSRNRWDSPLF----------SIQKEDLLP-----FEAISDAILKRKAPPPNQSTQSQPLTSTNFLYELDKVTQDVLMAILDSQKTSIPGDLIAIPGA 225
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|1025099767|ref|XP_016345125.1| (PREDICTED: protein KTI12 homolog [Sinocyclocheilus anshuiensis]) HSP 1 Score: 87.4261 bits (215), Expect = 5.340e-18 Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 0 Query: 1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154 + + T HC+V+ L V+ WN+ RE +Y E+ D L RFEAP NRWD PL D + ++ + A+ + KAP ST P + + L+ LD+VTQ +L ++LE QKTS+PGD+I++P A + F R Sbjct: 94 LIKHTQTPHCLVY-CLTSTDVSSEWNKGREADSQYTQEILDALILRFEAPDSRNRWDSPLFTIQ----------------QEDSLPFEAICDALFKRKAPPPNQSTKNQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGDLISIPGATEKIEFTR 233
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|1020548443|ref|XP_016109147.1| (PREDICTED: protein KTI12 homolog [Sinocyclocheilus grahami]) HSP 1 Score: 87.4261 bits (215), Expect = 5.841e-18 Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 0 Query: 1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154 + + T HC+V+ L V+ WN+ RE RY E+ D L RFEAP NRWD PL ++G D + ++ + A+ + KAP ST P + + L+ LD+VTQ +L ++LE QKTS+PGD+I++ A + F R Sbjct: 87 LIKHTQTPHCLVY-CLTSTDVSSEWNKGREADSRYTQEILDALILRFEAPDSRNRWDSPLFTI-----------QQG-----DSLPFEAICDALFKRKAPPPNQSTKNQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGDLISISGATEKIEFTR 226
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|966659513|gb|KTF94367.1| (hypothetical protein cypCar_00037051 [Cyprinus carpio]) HSP 1 Score: 86.6557 bits (213), Expect = 6.041e-18 Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0 Query: 1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCF 152 + + T HC+V+ L V+ WN+ RE +Y E+ D L RFEAP NRWD PL +D + + + A+ + KAP ST + P + + L+ LD+VTQ L ++LE QKTS+PGD+I++P A + F Sbjct: 94 LIKHTQTPHCLVY-CLTSTDVSSEWNKGREADSQYTQEILDALILRFEAPDSRNRWDSPLFTIQ----------------QKDSLPFDAICDALFKRKAPPPNQSTQSQPLSSTNFLYELDKVTQDALMAVLESQKTSVPGDLISIPGATEKISF 231 The following BLAST results are available for this feature:
BLAST of EWM22764.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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