EWM22764.1, cds7911 (CDS) Nannochloropsis gaditana

Overview
NameEWM22764.1
Unique Namecds7911
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:143303..143335 -
Alignment locationKK037247.1:142979..143055 -
Alignment locationKK037247.1:142586..142790 -
Alignment locationKK037247.1:141818..141967 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22764.1
Productchromatin associated protein kti12
Orig transcript idgnl|cribi|Naga_100297g4.7172.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:143303..143335 -
KK037247.1supercontigKK037247.1:142979..143055 -
KK037247.1supercontigKK037247.1:142586..142790 -
KK037247.1supercontigKK037247.1:141818..141967 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR013641Chromatin_KTI12
Homology
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|585103366|gb|EWM22764.1| (chromatin associated protein kti12 [Nannochloropsis gaditana])

HSP 1 Score: 317.39 bits (812), Expect = 1.057e-109
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query:    1 MARAETTQHCVVWVALEHQHVARAWNESREDRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154
            MARAETTQHCVVWVALEHQHVARAWNESREDRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR
Sbjct:    1 MARAETTQHCVVWVALEHQHVARAWNESREDRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|390354557|ref|XP_001180236.2| (PREDICTED: protein KTI12 homolog [Strongylocentrotus purpuratus])

HSP 1 Score: 94.3597 bits (233), Expect = 1.279e-20
Identity = 57/156 (36.54%), Postives = 83/156 (53.21%), Query Frame = 0
Query:    2 ARAETTQHCVVWVALEHQHVARAWNESRED--RYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154
             ++  T HCV++     + VA  WN  RED  +Y  E+FD L  RFEAPV  NRWD PL   +P                 DE+  Q++  A+   KAP   LST + P +  + L+ LD+ TQ  +++++  QKTS+PGD I++P A+  V   R
Sbjct:   95 VKSSQTPHCVIFCDTPVE-VATTWNSEREDQEKYTKEIFDGLVMRFEAPVSKNRWDSPLFSIAPS----------------DELPCQEIYDALFLRKAPPRNLSTVSQPLSATNFLYELDKRTQEAVTTLMSAQKTSIPGDDISIPGAKDKVHLAR 233          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|585664194|ref|XP_006811965.1| (PREDICTED: protein KTI12 homolog [Saccoglossus kowalevskii])

HSP 1 Score: 93.2041 bits (230), Expect = 3.815e-20
Identity = 55/152 (36.18%), Postives = 85/152 (55.92%), Query Frame = 0
Query:    1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPV 150
            ++++  T HCV+   L     A AWN+ RE  ++Y  E+FD L  RFEAP   NRWD PL  ++  P S+   E              +  AI + KAP    ST + P +  + L+ LD++TQ +++ +LE QKTS+PGD I++P+A+  +
Sbjct:   94 VSKSAKTTHCVIHCELA-VDTASAWNKEREKTEQYSQEIFDALVMRFEAPDSRNRWDSPL--FTILPDSDVPCE-------------AICDAIFDRKAPPPNFSTQSQPLSSTNFLYELDKITQDVITVLLEAQKTSVPGDQISIPDAKDKI 229          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|1025335184|ref|XP_016390603.1| (PREDICTED: protein KTI12 homolog [Sinocyclocheilus rhinocerous])

HSP 1 Score: 89.3521 bits (220), Expect = 1.224e-18
Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 0
Query:    1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154
            + +   T HC+V+  L    V+  WN+ RE   RY  E+ D L  RFEAP   NRWD PL                      D + ++ +  A+ + KAP    ST   P +  + L+ LD+VTQ +L ++LE QKTS+PGD+I++P A   + F R
Sbjct:   94 LIKHTQTPHCLVY-CLTSTDVSSEWNKGREADSRYTQEILDALILRFEAPDSRNRWDSPLFTIQ----------------QEDSLPFEAICDALFKRKAPPPNQSTKNQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGDLISIPGATEKIEFTR 233          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|808867563|gb|KKF18093.1| (Protein KTI12 [Larimichthys crocea])

HSP 1 Score: 88.5817 bits (218), Expect = 2.351e-18
Identity = 52/156 (33.33%), Postives = 82/156 (52.56%), Query Frame = 0
Query:    1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV--YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCF 152
            + +   T HC+V+  L     +  WN +R+  ++Y  ++FD L  RFEAP   NRWD PL                     +D+   Y+ +  A+ + KAP A  ST + P + A+ L+ LD++TQ +L ++   QKTS+PGD+I+VP A   + F
Sbjct:   94 LIKHAQTPHCLVY-CLTSDDESSTWNTNRDAAEQYTKDIFDALVLRFEAPDSRNRWDNPLFTI-----------------LKDDTLPYEAISDALFKRKAPPANQSTQSQPLSSANFLYELDKITQEVLMAVFNAQKTSVPGDLISVPGATEKISF 231          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|966648061|gb|KTF82971.1| (hypothetical protein cypCar_00026712 [Cyprinus carpio])

HSP 1 Score: 87.4261 bits (215), Expect = 3.440e-18
Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 0
Query:    1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCF 152
            + +   T HC+V+  L    V+  WN+ RE   RY  E+ D L  RFEAP   NRWD PL             ++E         ++ +  A+ + KAP    ST   P +  + L+ LD+VTQ +L ++LE QKTS+PGD+I++P A   + F
Sbjct:   92 LIKHTQTPHCLVY-CLTSADVSSEWNKGREADSRYKQEILDALILRFEAPDSRNRWDSPLFTI----------QQEDLLP-----FEAICDALFKRKAPPPNQSTKNQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGDLISIPGATEKISF 229          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|831313038|ref|XP_012689039.1| (PREDICTED: protein KTI12 homolog isoform X2 [Clupea harengus])

HSP 1 Score: 87.0409 bits (214), Expect = 4.255e-18
Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    7 TQHCVVWVALEHQHVARAWNESRED--RYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEVYQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEA 146
            T HC+V+  L    V+  WN SRE   +Y  E+ D L  RFEAP   NRWD PL           + +KE         ++ +  AI + KAP    ST + P    + L+ LD+VTQ +L +IL+ QKTS+PGD+I +P A
Sbjct:  100 TPHCLVY-CLTSAEVSSGWNRSRESGAQYTQEILDALVLRFEAPDSRNRWDSPLF----------SIQKEDLLP-----FEAISDAILKRKAPPPNQSTQSQPLTSTNFLYELDKVTQDVLMAILDSQKTSIPGDLIAIPGA 225          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|1025099767|ref|XP_016345125.1| (PREDICTED: protein KTI12 homolog [Sinocyclocheilus anshuiensis])

HSP 1 Score: 87.4261 bits (215), Expect = 5.340e-18
Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 0
Query:    1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154
            + +   T HC+V+  L    V+  WN+ RE   +Y  E+ D L  RFEAP   NRWD PL                      D + ++ +  A+ + KAP    ST   P +  + L+ LD+VTQ +L ++LE QKTS+PGD+I++P A   + F R
Sbjct:   94 LIKHTQTPHCLVY-CLTSTDVSSEWNKGREADSQYTQEILDALILRFEAPDSRNRWDSPLFTIQ----------------QEDSLPFEAICDALFKRKAPPPNQSTKNQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGDLISIPGATEKIEFTR 233          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|1020548443|ref|XP_016109147.1| (PREDICTED: protein KTI12 homolog [Sinocyclocheilus grahami])

HSP 1 Score: 87.4261 bits (215), Expect = 5.841e-18
Identity = 55/157 (35.03%), Postives = 82/157 (52.23%), Query Frame = 0
Query:    1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCFRR 154
            + +   T HC+V+  L    V+  WN+ RE   RY  E+ D L  RFEAP   NRWD PL              ++G     D + ++ +  A+ + KAP    ST   P +  + L+ LD+VTQ +L ++LE QKTS+PGD+I++  A   + F R
Sbjct:   87 LIKHTQTPHCLVY-CLTSTDVSSEWNKGREADSRYTQEILDALILRFEAPDSRNRWDSPLFTI-----------QQG-----DSLPFEAICDALFKRKAPPPNQSTKNQPLSSTNFLYELDKVTQDVLMAVLESQKTSVPGDLISISGATEKIEFTR 226          
BLAST of EWM22764.1 vs. NCBI_GenBank
Match: gi|966659513|gb|KTF94367.1| (hypothetical protein cypCar_00037051 [Cyprinus carpio])

HSP 1 Score: 86.6557 bits (213), Expect = 6.041e-18
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 0
Query:    1 MARAETTQHCVVWVALEHQHVARAWNESRE--DRYPPELFDDLWGRFEAPVEGNRWDRPLICYSPRPPSEGAEEKEGRRSTRDEV-YQQVLAAITEGKAPAAGLSTATAPRNDADALFLLDQVTQRLLSSILERQKTSMPGDIITVPEARTPVCF 152
            + +   T HC+V+  L    V+  WN+ RE   +Y  E+ D L  RFEAP   NRWD PL                     +D + +  +  A+ + KAP    ST + P +  + L+ LD+VTQ  L ++LE QKTS+PGD+I++P A   + F
Sbjct:   94 LIKHTQTPHCLVY-CLTSTDVSSEWNKGREADSQYTQEILDALILRFEAPDSRNRWDSPLFTIQ----------------QKDSLPFDAICDALFKRKAPPPNQSTQSQPLSSTNFLYELDKVTQDALMAVLESQKTSVPGDLISIPGATEKISF 231          
The following BLAST results are available for this feature:
BLAST of EWM22764.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103366|gb|EWM22764.1|1.057e-109100.00chromatin associated protein kti12 [Nannochloropsi... [more]
gi|390354557|ref|XP_001180236.2|1.279e-2036.54PREDICTED: protein KTI12 homolog [Strongylocentrot... [more]
gi|585664194|ref|XP_006811965.1|3.815e-2036.18PREDICTED: protein KTI12 homolog [Saccoglossus kow... [more]
gi|1025335184|ref|XP_016390603.1|1.224e-1835.03PREDICTED: protein KTI12 homolog [Sinocyclocheilus... [more]
gi|808867563|gb|KKF18093.1|2.351e-1833.33Protein KTI12 [Larimichthys crocea][more]
gi|966648061|gb|KTF82971.1|3.440e-1835.06hypothetical protein cypCar_00026712 [Cyprinus car... [more]
gi|831313038|ref|XP_012689039.1|4.255e-1838.73PREDICTED: protein KTI12 homolog isoform X2 [Clupe... [more]
gi|1025099767|ref|XP_016345125.1|5.340e-1834.39PREDICTED: protein KTI12 homolog [Sinocyclocheilus... [more]
gi|1020548443|ref|XP_016109147.1|5.841e-1835.03PREDICTED: protein KTI12 homolog [Sinocyclocheilus... [more]
gi|966659513|gb|KTF94367.1|6.041e-1834.19hypothetical protein cypCar_00037051 [Cyprinus car... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7933rna7933Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications