EWM22776.1, cds7896 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|585103384|gb|EWM22776.1| (Ribonuclease Zc3h12a-like protein [Nannochloropsis gaditana]) HSP 1 Score: 355.91 bits (912), Expect = 2.173e-124 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
Query: 1 MHDAPEDAVTTSGPAPLNARIDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHCARDPSLRPFLQRNRVSYTFFANDFLPNPGHVGLQALKSRRNEEQKEIGRH 172
MHDAPEDAVTTSGPAPLNARIDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHCARDPSLRPFLQRNRVSYTFFANDFLPNPGHVGLQALKSRRNEEQKEIGRH
Sbjct: 1 MHDAPEDAVTTSGPAPLNARIDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHCARDPSLRPFLQRNRVSYTFFANDFLPNPGHVGLQALKSRRNEEQKEIGRH 172
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|470482726|ref|XP_004343639.1| (hypothetical protein ACA1_098840 [Acanthamoeba castellanii str. Neff] >gi|440799463|gb|ELR20508.1| hypothetical protein ACA1_098840 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 84.3445 bits (207), Expect = 6.554e-16 Identity = 49/154 (31.82%), Postives = 77/154 (50.00%), Query Frame = 0
Query: 18 NARIDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHCARDPS-----LRPFLQRNRVSYTFFANDFLPNPGHVGLQALKSRRNEEQ 166
N ++ I AI Y++ + V AFIP + L RK P +E G M + E L +VD + PP D DD Y +E+++ A +++ND + DH AR P + +L+ + +S+TF N+FLPNP L A+ + E+
Sbjct: 624 NKKVSVRGIQLAIQYWQKKGHQVIAFIPEHYLHRKAP----PPDKEQTLGEYMPMADNTELLAQLVDDGSVVLCPPQDYDDSYCIEYSKRHGAYIVTNDRYWDHIARQPEDQRAGVTRWLREHCISFTFAKNEFLPNPDFAFLPAVPQAQGGEK 773
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|813148964|ref|XP_012200129.1| (hypothetical protein SPRG_19902 [Saprolegnia parasitica CBS 223.65] >gi|641535318|gb|KDO29236.1| hypothetical protein SPRG_19902 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 76.2554 bits (186), Expect = 4.980e-13 Identity = 47/144 (32.64%), Postives = 72/144 (50.00%), Query Frame = 0
Query: 17 LNARIDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQES---LQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHC-------ARDPSLRPFLQRNRVSYTFFANDFLPNP 150
LNAR + I Y+ R V AF+P Y LR + G A R G G + ++ + LQSMV + PP D DD Y +++A + V++ND FRDH + ++R +L + +S+T+ ++FLPNP
Sbjct: 740 LNARFSCAGIRLVFDYYLARGHKVLAFLPDYLLRYESVG---AQKRMAGAGYDVSPSKLPDDVGLLQSMVLEGTVIATPPQDYDDSYCIQYAGRHDGCVVTNDLFRDHVDGLQGTGQQKAAMRQWLSAHCISFTWVGDEFLPNP 880
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|673031266|ref|XP_008869594.1| (hypothetical protein H310_06350 [Aphanomyces invadans] >gi|574474745|gb|ETW01746.1| hypothetical protein H310_06350 [Aphanomyces invadans]) HSP 1 Score: 76.2554 bits (186), Expect = 5.441e-13 Identity = 42/140 (30.00%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 17 LNARIDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHC------ARDPSLRPFLQRNRVSYTFFANDFLPNP 150
LNA+ I I ++ R V AF+P Y L+ + G + G + + LQ+MV + PP D DD Y +++A + V++ND FRDH + ++R +L+ +R+S+T+ ++FLPNP
Sbjct: 817 LNAKFSCRGIRLVIDHYIARGHKVIAFLPDYLLKYETVGAQKRMANVGYDVSPTKLPDDVTLLQAMVLEGLIIATPPQDYDDSYCIQYAGTHDGCVVTNDLFRDHLDNIKPSQKRSAMREWLKAHRISFTWVGDEFLPNP 956
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|669154642|ref|XP_008612883.1| (hypothetical protein SDRG_08764 [Saprolegnia diclina VS20] >gi|530735418|gb|EQC33660.1| hypothetical protein SDRG_08764 [Saprolegnia diclina VS20]) HSP 1 Score: 75.8702 bits (185), Expect = 7.054e-13 Identity = 47/144 (32.64%), Postives = 71/144 (49.31%), Query Frame = 0
Query: 17 LNARIDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQES---LQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHC-------ARDPSLRPFLQRNRVSYTFFANDFLPNP 150
LNAR + I Y+ R V AF+P Y LR + G A R G G + ++ + LQSMV + PP D DD Y +++A + V++ND FRDH ++R +L + +S+T+ ++FLPNP
Sbjct: 754 LNARFSCAGIRLVFDYYMARGHKVLAFLPDYLLRYESVG---AQKRMAGAGYDVSPSKLPDDVGLLQSMVLEGTVIATPPQDYDDSYCIQYAGRHDGCVVTNDLFRDHVDGLQGNGQTKAAMRQWLSAHCISFTWVGDEFLPNP 894
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|1069834273|gb|OEH73738.1| (ribonuclease related [Cyclospora cayetanensis]) HSP 1 Score: 74.3294 bits (181), Expect = 2.275e-12 Identity = 41/131 (31.30%), Postives = 66/131 (50.38%), Query Frame = 0
Query: 26 IASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHCARDP------SLRPFLQRNRVSYTFFANDFLPNP 150
I S ++Y++ R V F+P Y L R R N ++ E+L+ + L + PP D DD Y +++A N +++ND +RD R P +LR +L+R+ +S+TF +FLPNP
Sbjct: 1090 ILSVLAYYKDRGYKVRVFVPDYVLSYSSVAEARRQERAQLPVNQARLPDSVEALKKLQREGTLISTPPQDYDDSYCIKYALMNNGCIVTNDLYRDITNRVPNKSQQTALRAWLKRHVISFTFVDGEFLPNP 1220
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|1173941730|gb|OQR90842.1| (hypothetical protein THRCLA_09187 [Thraustotheca clavata]) HSP 1 Score: 74.3294 bits (181), Expect = 2.421e-12 Identity = 45/151 (29.80%), Postives = 68/151 (45.03%), Query Frame = 0
Query: 7 DAVTTSGPAPLNARIDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHC-------ARDPSLRPFLQRNRVSYTFFANDFLPNP 150
DA + LN R I Y+ R V AF+P Y L + G + G N + LQSMV + PP D DD Y +++A + V++ND FRDH + ++R +L +R+S+T+ ++F PNP
Sbjct: 1035 DAANVAMRHGLNKRFSCKGIRLVFDYYLARGHKVIAFLPDYLLTYESVGAQKRMAGIGFDVNPSKLPDDVALLQSMVLEGTIIATPPQDYDDSYCIQYAGHHDGCVVTNDLFRDHVEGMNASGQKKAAMRQWLAAHRISFTWVGDEFFPNP 1185
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|1173944886|gb|OQR93572.1| (dnaJ-like subfamily C member 25-like [Achlya hypogyna]) HSP 1 Score: 73.1738 bits (178), Expect = 5.395e-12 Identity = 38/140 (27.14%), Postives = 69/140 (49.29%), Query Frame = 0
Query: 21 IDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESL-QSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHCARDPSL------RPFLQRNRVSYTFFANDFLPNPGHV 153
+ R+ SA+ +F + V AF P Y +R K P R M + +L Q++VD+ + PP +DD +++++A + + ++SND FRDH A+ +++ +++TF +FLPN H+
Sbjct: 21 VRVQRLVSALDHFEALGVRVIAFAPGYWIRSKAPT---PRTRPLSTVETEMDQRTEMALVQALVDQERVVLTPPQAHDDFFLIDYAMKHDGFIVSNDMFRDHVAKKMQFHGRNLTEAWIRSRCITFTFVGTEFLPNAEHM 157
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|1173959147|gb|OQS05412.1| (hypothetical protein THRCLA_02458 [Thraustotheca clavata]) HSP 1 Score: 71.633 bits (174), Expect = 1.429e-11 Identity = 43/146 (29.45%), Postives = 72/146 (49.32%), Query Frame = 0
Query: 21 IDASRIASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHCARDPSL------RPFLQRNRVSYTFFANDFLPNPGHVGLQALKS 160
I R+ +AI +F + V AF P+Y LR K + MMQ Q +VD + PP +DDL+I+++A + + V++ND FRDH A +++ + +++TF ++FLP+ H+ Q L+S
Sbjct: 21 IRLERLHNAIKHFETLGVRVIAFAPSYWLRSKNLTPRTRSQFQEIDQCEMMQ------FQLLVDDEKVVLTPPQAHDDLFIIDYAMKHDGYVVTNDMFRDHVANKMEFHGNELTEIWVKTHCITFTFVGSEFLPSAQHI--QHLRS 158
BLAST of EWM22776.1 vs. NCBI_GenBank
Match: gi|916419984|ref|XP_013231223.1| (Ribonuclease ZC3H12A, related [Eimeria tenella] >gi|557141990|emb|CDJ40473.1| Ribonuclease ZC3H12A, related [Eimeria tenella]) HSP 1 Score: 71.2478 bits (173), Expect = 2.469e-11 Identity = 39/131 (29.77%), Postives = 63/131 (48.09%), Query Frame = 0
Query: 26 IASAISYFRGRSIGVAAFIPAYALRRKGPGGGRAGGREGGGGNVMMQTEAQESLQSMVDRRWLATIPPTDNDDLYILEFAREKNALVLSNDCFRDHCAR------DPSLRPFLQRNRVSYTFFANDFLPNP 150
I +A+ Y+R R V F+P Y L R R + + E L+ + L P D DDLY + +A + +++ND +RD C+R +LR +L+R+ +++TF DF+PNP
Sbjct: 1290 ILAALDYYRERGYKVRVFVPEYVLSYNSYSDARRQERAQMPVSYTRMPDCIEVLRKLHREGILICTPSQDYDDLYCIRYALMRGGCIITNDMYRDICSRVADKTQQAALRLWLKRHIITFTFVDGDFIPNP 1420 The following BLAST results are available for this feature:
BLAST of EWM22776.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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