EWM22784.1, cds7889 (CDS) Nannochloropsis gaditana

Overview
NameEWM22784.1
Unique Namecds7889
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:80501..81031 -
Alignment locationKK037247.1:79787..80185 -
Alignment locationKK037247.1:79407..79670 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22784.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100958g1.9903.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:80501..81031 -
KK037247.1supercontigKK037247.1:79787..80185 -
KK037247.1supercontigKK037247.1:79407..79670 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22784.1 vs. NCBI_GenBank
Match: gi|585103398|gb|EWM22784.1| (hypothetical protein Naga_100958g1 [Nannochloropsis gaditana])

HSP 1 Score: 753.436 bits (1944), Expect = 0.000e+0
Identity = 397/397 (100.00%), Postives = 397/397 (100.00%), Query Frame = 0 
Query:    1 MALCIHFMGDSSLLLRDSYSHFALLSSRTEAAFVAPCLPSSPPSSLLPSTLSRPPRTMLTMTKADGEQGKKRAKNVGGTWIGRVAQGVSTAAMLAFPSNLMIAPVVDGPQSLSFTLAPSRANAAEAVAEKSDLKSLLSDYSTTVSKKEEEAKAAEAAAAQKAATPPPAPTKKPAPAPARTPSPSPKPKATPKPAPAPPAAAPPAVAPPAASPPAVPPPSPSPPSPPPAPKSAPKPAVKKAAAPSAAATAEAKRAKELAKQKAEAAAKAAADKVAAEEKAKEDARAAFVKQLNEKREKFGLAPSKTMVAPKVIAPASRAPVQKAVDLLPEEKQLQAFQEKEKTLAASLKTLKAEVANTEKELKKATAAETVGKGRGRERGREGGRAGGRSPLPSLHLP 397
            MALCIHFMGDSSLLLRDSYSHFALLSSRTEAAFVAPCLPSSPPSSLLPSTLSRPPRTMLTMTKADGEQGKKRAKNVGGTWIGRVAQGVSTAAMLAFPSNLMIAPVVDGPQSLSFTLAPSRANAAEAVAEKSDLKSLLSDYSTTVSKKEEEAKAAEAAAAQKAATPPPAPTKKPAPAPARTPSPSPKPKATPKPAPAPPAAAPPAVAPPAASPPAVPPPSPSPPSPPPAPKSAPKPAVKKAAAPSAAATAEAKRAKELAKQKAEAAAKAAADKVAAEEKAKEDARAAFVKQLNEKREKFGLAPSKTMVAPKVIAPASRAPVQKAVDLLPEEKQLQAFQEKEKTLAASLKTLKAEVANTEKELKKATAAETVGKGRGRERGREGGRAGGRSPLPSLHLP
Sbjct:    1 MALCIHFMGDSSLLLRDSYSHFALLSSRTEAAFVAPCLPSSPPSSLLPSTLSRPPRTMLTMTKADGEQGKKRAKNVGGTWIGRVAQGVSTAAMLAFPSNLMIAPVVDGPQSLSFTLAPSRANAAEAVAEKSDLKSLLSDYSTTVSKKEEEAKAAEAAAAQKAATPPPAPTKKPAPAPARTPSPSPKPKATPKPAPAPPAAAPPAVAPPAASPPAVPPPSPSPPSPPPAPKSAPKPAVKKAAAPSAAATAEAKRAKELAKQKAEAAAKAAADKVAAEEKAKEDARAAFVKQLNEKREKFGLAPSKTMVAPKVIAPASRAPVQKAVDLLPEEKQLQAFQEKEKTLAASLKTLKAEVANTEKELKKATAAETVGKGRGRERGREGGRAGGRSPLPSLHLP 397
The following BLAST results are available for this feature:
BLAST of EWM22784.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103398|gb|EWM22784.1|0.000e+0100.00hypothetical protein Naga_100958g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7911rna7911Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications