EWM22791.1, cds7881 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22791.1 vs. NCBI_GenBank
Match: gi|585103409|gb|EWM22791.1| (molybdopterin biosynthesis [Nannochloropsis gaditana]) HSP 1 Score: 390.193 bits (1001), Expect = 3.838e-137 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
Query: 1 MSAMTDESTMEDEAADVLGCETTGQPSSYETLVEENRRLKAQLHCQESQLRLHEQERLKQGRHIPPPSAHFPPCASTASPPVPSPPASSSSSSPSNPLPLPPVHSLSSSEISRYSRQLLVSRFGVTGQRNLLSSSVLVVGAGDPWGQPGGDEEGGLGLGSSPGFEWWPAGERAGGGRGLWERGVGDCRVGPGGGRER 197
MSAMTDESTMEDEAADVLGCETTGQPSSYETLVEENRRLKAQLHCQESQLRLHEQERLKQGRHIPPPSAHFPPCASTASPPVPSPPASSSSSSPSNPLPLPPVHSLSSSEISRYSRQLLVSRFGVTGQRNLLSSSVLVVGAGDPWGQPGGDEEGGLGLGSSPGFEWWPAGERAGGGRGLWERGVGDCRVGPGGGRER
Sbjct: 1 MSAMTDESTMEDEAADVLGCETTGQPSSYETLVEENRRLKAQLHCQESQLRLHEQERLKQGRHIPPPSAHFPPCASTASPPVPSPPASSSSSSPSNPLPLPPVHSLSSSEISRYSRQLLVSRFGVTGQRNLLSSSVLVVGAGDPWGQPGGDEEGGLGLGSSPGFEWWPAGERAGGGRGLWERGVGDCRVGPGGGRER 197
BLAST of EWM22791.1 vs. NCBI_GenBank
Match: gi|255577167|ref|XP_002529467.1| (PREDICTED: adenylyltransferase and sulfurtransferase MOCS3 [Ricinus communis] >gi|223531083|gb|EEF32933.1| ubiquitin-activating enzyme E1, putative [Ricinus communis]) HSP 1 Score: 59.6918 bits (143), Expect = 3.668e-7 Identity = 47/124 (37.90%), Postives = 59/124 (47.58%), Query Frame = 0
Query: 19 GCETTGQPSSYETLVEENRRLKAQLHCQESQLRLHEQERLKQGRHIPPPSAHFPPCASTASPPVPSPPASSSSSSPSNPLPLPPVHSLSSSEISRYSRQLLVSRFGVTGQRNLLSSSVLVVGAG 142
G E+TG ETL E + ++ E+QLR Q L+ TAS P S++ S S H+LSS I RYSR LL+ FG+ GQ NLL SS+LVVGAG
Sbjct: 5 GSESTGILREIETLKTEKSNIDNRIAALEAQLR---QINLQN---------------DTASSNGSCPLISTNDSGLS--------HALSSDMIYRYSRHLLLPSFGIQGQSNLLKSSILVVGAG 102
BLAST of EWM22791.1 vs. NCBI_GenBank
Match: gi|661889220|emb|CDP07189.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 59.3066 bits (142), Expect = 5.405e-7 Identity = 47/124 (37.90%), Postives = 59/124 (47.58%), Query Frame = 0
Query: 21 ETTGQPSSYETL--VEENRRLKAQLHCQESQLRLHEQERLKQGRHIPPPSAHFPPCASTASPPVPSPPASSSSSSPSNPLPLPPVHSLSSSEISRYSRQLLVSRFGVTGQRNLLSSSVLVVGAG 142
E+ G+P + E L +E R K ++ Q S L Q+ + C V S +SS PS P H L+S I RYSRQLL+ FGV GQ NLL SSVLV+GAG
Sbjct: 2 ESNGRPQASEILCQIESLRSSKDEIERQISDLEAQLQQL----------NCDENNCRKAEEDEVNSNGSSSCLILPSENGSFDPGHGLASDMIYRYSRQLLLPAFGVQGQANLLKSSVLVIGAG 115 The following BLAST results are available for this feature:
BLAST of EWM22791.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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