EWM22806.1, cds7870 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|585103429|gb|EWM22806.1| (intraflagellar transport protein 52 [Nannochloropsis gaditana]) HSP 1 Score: 1182.55 bits (3058), Expect = 0.000e+0 Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0
Query: 1 MHSEQSGHSSQSNASSGNYSSNRKLDGCNVARLTYQPHPGQAPLEERHNHVVFNAVKGENYQNMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLSSLPETEDDQAGKDERQEEEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRGGDKERNWRKS 586
MHSEQSGHSSQSNASSGNYSSNRKLDGCNVARLTYQPHPGQAPLEERHNHVVFNAVKGENYQNMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLSSLPETEDDQAGKDERQEEEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRGGDKERNWRKS
Sbjct: 1 MHSEQSGHSSQSNASSGNYSSNRKLDGCNVARLTYQPHPGQAPLEERHNHVVFNAVKGENYQNMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLSSLPETEDDQAGKDERQEEEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRGGDKERNWRKS 586
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|553183511|ref|XP_005853911.1| (intraflagellar transport protein 52, partial [Nannochloropsis gaditana CCMP526] >gi|422295147|gb|EKU22446.1| intraflagellar transport protein 52, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 625.935 bits (1613), Expect = 0.000e+0 Identity = 399/485 (82.27%), Postives = 401/485 (82.68%), Query Frame = 0
Query: 130 EQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLSSLPETEDDQAGKDERQEEEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLN-GGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFR---------------------------------WLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPP----SLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRG 576
EQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLSSLPETEDDQAGKDERQEEE DPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRR EAGKEEE+ LN G GGG GGGGRRGGRLVVLGA DMWTDAWLDQEDNGWLADVIFR WLLHREPDAESSAPPSNLGQASFSHDRSPSRL QLLFCGDARPEQERAHDPALPP SLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFV FASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAE+ G
Sbjct: 1 EQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLSSLPETEDDQAGKDERQEEEKDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRREEAGKEEEKRLNEGERGKGRGGGGAGGGGGRRGGRLVVLGAVDMWTDAWLDQEDNGWLADVIFRVGARKAPEGEGEGKERGGEGWHHSRPLVLPRSQWLLHREPDAESSAPPSNLGQASFSHDRSPSRLAQLLFCGDARPEQERAHDPALPPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFV-------------------------------FASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEIVG 454
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|953494892|emb|CEG43533.1| (intraflagellar transport protein 52 homolog [Plasmopara halstedii]) HSP 1 Score: 176.407 bits (446), Expect = 5.508e-45 Identity = 161/551 (29.22%), Postives = 239/551 (43.38%), Query Frame = 0
Query: 47 RHNHVVFNAVKGENY---QNMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLS-----------LSSLPETEDD-QAGKDERQE------EEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRG 576
+ + V+F+A K E + +K+L RRL+ +V +NK D+ +++ ++ VFA + F++ E L FL G S+LL+L EG G Q + LN WL+ +G+ + DAV+R H ++ HPKEV +S + L +D +G+D + E+ G SFVYPYG +L+V PA LLSSG SYP +RPV AAW+ R G + GRL+V G+ + D W+D+E+N L ++IFRWLL + NL H A P L + P + L+ +LR C+Q + + D L + L+ +L+PE + +H LG++ E PL + P+F CP PPL+ AVFPP+ PPPP L+QFDLD+ FAS +LA+L +KC S EDL Y+VRE+A++ G
Sbjct: 12 KSSTVLFDASKKEQFYPASGLKKLARRLKPL-CRVDVNK-DDLSRDRIKDA-------------------NVLVFAGVRERFSSTEFATLKDFL-SSGGSILLMLGEG-GEQQFDTN------LNGWLKDFGIFVNPDAVIRTVYH-KYHHPKEVLVSRGVVNRELTRMANELFSRKDVLMSGRDLKVTGSDGAPEKDQKGLSFVYPYGATLNVKKPAATLLSSGSVSYPVNRPVAAAWQER--------------------------------------GVAAPASKSGRLIVFGSTQCFVDEWIDKEENAKLQEIIFRWLLKDKT--------INLN-----------------------------HQDAEDPDLNEYVRLPDTQALSDRLRSCMQ----ESEELPKDFTRLF-----------------------DDSLFKF-DTSLIPEAVNLYHDLGVKHE-PLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASETLRLAQLTNKC-----------SDEDLEYYVRESADILG 417
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|646717406|gb|KDR20281.1| (Intraflagellar transport protein 52-like protein [Zootermopsis nevadensis]) HSP 1 Score: 171.785 bits (434), Expect = 1.030e-43 Identity = 145/540 (26.85%), Postives = 224/540 (41.48%), Query Frame = 0
Query: 44 LEERHNHVVFNAVKGENY---QNMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLSSLPETEDDQAGK---DERQEEEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSRE-DLSYFVREAAEVRG 576
++E+ N ++FN+ K E + +N K L R+L+ KV NK I D G +P P+ FT E +L ++L G ++L+L+ EG E+ + +N L+ +G+ + D V+R + F HPKE ++ L +GK + + FVYPYG +L+VA PA +LS+G ++P +RPV A + G GG+L VLG+ +++D ++D+EDN + DV+FR+L D + Q A DP + + P LA++ R CLQ + P + L N L+++ + P + +H L ++ E PLR + P+F P PPL+ AVFPPSF PPP LE FDLD+ F+S ++ LA+L +KC L G G+ E DL YF+RE +V G
Sbjct: 11 VKEKGNTILFNSSKNELFKISENYKTLHRKLK-GSWKVLTNKDD--------------ISSDVLSGVTLFVIPG------PREKFTESEFNSLKKYL-DSGGNILILVGEG-------GEKNFQTNVNFLLEEYGIMINTDCVVRTHYYKYF-HPKECLVANGILNRAIAVVSGKFSGSDHYDHNISQTLKFVYPYGATLNVARPAVAVLSTGSVAFPLNRPVCAFYTHTNTT---------------------------------------SGSPGGKLAVLGSVHIFSDKYIDKEDNDIVRDVLFRFLT----------------------------------SSDIKLNQIDADDP----EITDYIMVPDTARLAEKPRVCLQESVDEIPTDYTKLFN--------------------------QRLFSINTGCV-PAAIQAYHELNVKHE-PLRLITPQFETPLPPLQAAVFPPSFRELPPPNLELFDLDEAFSSEKSHLAQLANKC----LSGGDIGNDEADLEYFIRECGQVLG 411
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|1197305583|ref|XP_021122604.1| (intraflagellar transport protein 52 homolog [Anas platyrhynchos]) HSP 1 Score: 172.17 bits (435), Expect = 1.044e-43 Identity = 134/476 (28.15%), Postives = 216/476 (45.38%), Query Frame = 0
Query: 115 LAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLSSLPETEDDQAGKD--ERQEEEGD----PGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAW--------EGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRG 576
L + A P+ F+ E L +FL +G ++L++L EG G ++ G+ +N L+ +G+ ++DAV+R + ++ HPKE +S L + AGK E +E+G G +FVYP+G +L+V PA +LS+G +P +RP+LA + + + E E G +GR + + + + L +R +GGR+ LG+ M++D +LD+E+NG + DV+F+WL D Q D P + P L++QLR CLQ DE R+ + K+ LY L T LP V+ + L ++ E PL+ + P F P P L+ AVFPP+F PPP LE FDLD+ F+S +T+LA + +KC +DL +++R+ ++ G
Sbjct: 32 LWITAGPREKFSAAEFLVLKKFL-EDGGAILVMLREG-GESRSGTN------INFLLEEYGIVFNNDAVVRNVYY-KYHHPKEALISDGVLNRGISEAAGKTALETTDEDGSIRNLQGLTFVYPFGATLNVMKPAVAILSTGSVCFPLNRPILAFYQHEFAEVVDKKVEDEARDRGSLSGRAEKLVRRKTKSLGAKKRYSKEQQQKVKEWKSKGGRMAALGSCHMFSDQYLDKEENGKIMDVLFQWLT----------------------------------TSDVHLNQMDMED----PEISDYTMLPDAAALSEQLRVCLQ------------------EGDENPRDFTKLFDKS---------LYQL-DTTALPAVIKAYEQLNVKHE-PLQLIQPLFETPLPALQPAVFPPAFRELPPPPLELFDLDETFSSEKTRLAEITNKCTD-----------DDLEFYIRKCGDILG 420
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|301090731|ref|XP_002895569.1| (Intraflagellar Transport Protein 52 [Phytophthora infestans T30-4] >gi|262097808|gb|EEY55860.1| Intraflagellar Transport Protein 52 [Phytophthora infestans T30-4]) HSP 1 Score: 172.555 bits (436), Expect = 1.469e-43 Identity = 161/547 (29.43%), Postives = 242/547 (44.24%), Query Frame = 0
Query: 51 VVFNAVKGENY---QNMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLS-----------LSSLPETEDD-QAGKDER------QEEEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRG 576
V+F+A K E + +K+L R+L+ +V +NK D+ +++ S+ VFA + F++ E L FL G S+LL+L EG E+ + LN WL+ +G+ + DAV+R H ++ HPKEV +S ++ L +D AG++ + E+ G +FVYPYG +L+V PA LLSSG SYP +RPV+AAW+ GG G + GRL+V G+A + D W+D+E+N L ++IFRWLL D+S S H A P L + P + L+ +LR C+Q + P+ D L + L+ +L+PE + + LG++ E PL + P+F CP PPL+ AVFPP+ PPPP L+QFDLD+ FAS +LA+L +KC S +DL Y+VRE+A++ G
Sbjct: 18 VLFDASKKEQFYPTSGLKKLARKLKPL-CRVDVNK-DDLSRDRIKDA-------------------SVLVFAGVRERFSSTEFATLKDFL-NSGGSILLMLGEG-------GEQTFDTNLNGWLKDFGIFVNPDAVIRTVYH-KYHHPKEVLISSGVVNRELARMVNVLYGRKDLLVAGRESKPLGPGGALEKDQKGLTFVYPYGATLTVKKPAAPLLSSGFISYPVNRPVVAAWQE--------------------------------------GGVAGPASKSGRLIVFGSAQCFVDEWIDKEENAKLQEIIFRWLLK---------------------DKSISL----------------NHQDAEDPDLNEYVRLPDTQALSDRLRSCMQ-ESEDLPK---DFTRLF-----------------------DDSLFKF-DTSLIPEAVNLYRELGVKHE-PLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKC-----------SDDDLEYYVRESADILG 419
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|676386317|ref|XP_009036437.1| (hypothetical protein AURANDRAFT_2280, partial [Aureococcus anophagefferens] >gi|323452649|gb|EGB08522.1| hypothetical protein AURANDRAFT_2280, partial [Aureococcus anophagefferens]) HSP 1 Score: 171.785 bits (434), Expect = 1.527e-43 Identity = 168/554 (30.32%), Postives = 234/554 (42.24%), Query Frame = 0
Query: 51 VVFNAVKGENYQ---NMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLS-------LSSLPETEDDQAGKDER------QEEEGDP------GFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNT-LLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCA---SSRLEG-AKEGSREDLSYFVREAAEVRGG 577
+ +A K E + K+LFRRLR + K NK P +L + V P+ FT E + + F+ G S+L+L SEG G + G +N L+ +GM A D+VLR + ++ HPKEVF+S L++ A K R +E EG G SFVYP G +LSV PA+ +LSSG SYP HR V AAWEG GER + R R+V GA +M++D WLD+E+NG L D++FRWL DAE+ + + G + ++ R P + LA +LR CLQ DE R R A R +T ++PEV+A + L ++ E L + P F P PPL+ A FPP+ PP P L+QFDLD+ FAS R +LA+L +KC ++ +G A +DL Y+VREA E+ G
Sbjct: 4 ICIDASKRETHHAGNGFKKLFRRLRSSNYKPISNKEDLTPQLL--------------------GTVDVLVVGAPRERFTADELRDVKEFV-ANGGSLLVLSSEG-GEPKLGCN------VNELLEGYGMSAQPDSVLRTVYY-KYLHPKEVFVSHGVLQPELATHKHLSHGNARKHRRGGVAAAKEPEGGHDAAQGGGLSFVYPRGATLSVQRPARAVLSSGAISYPIHRTVCAAWEGSHP-------------------------NGERNRPR------------PRVVAAGAVEMFSDEWLDKEENGTLCDLLFRWLAR---DAEAPSLHHHAGDDAAAYAR-----------------------------------VPDIEALASRLRACLQEN------------------DELPRNFTRLFNDA-----------LFRFDTDVIPEVVALYEQLHVKHE-ALSLIPPSFEYPLPPLQPATFPPALREPPSPPLDQFDLDEHFASKRERLAQLTNKCIPGGMTKKDGDAALAEPDDLEYYVREAGEIVGA 423
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|960964088|ref|XP_014796793.1| (PREDICTED: intraflagellar transport protein 52 homolog isoform X1 [Calidris pugnax]) HSP 1 Score: 170.244 bits (430), Expect = 6.389e-43 Identity = 150/551 (27.22%), Postives = 239/551 (43.38%), Query Frame = 0
Query: 49 NHVVFNAVKGENYQ---NMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLS-------------LSSLPETEDDQAGKDERQEEEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAW------EGR-AEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRG 576
N +VFNA KGE + N K L +RLR K+ K + + G++ L + A P+ F+ E L +FL +G ++L++L EG G + G+ +N L+ +G+ ++DAV+R + ++ HPKE +S + L T++D +G+D + +FVYP+G +L+V PA +LS+G +P +RP+LA + EGR E E G + R + G+ + L ER +GG++ LG++ M++D +LD+E+NG + DV+F+WL D Q D P + P L++QLR CLQ DE R+ + A LY L T LP V+ + L ++ E PL+ + P+F P P + AVFPP+F PPP LE FDLD+ F+S + +LA + +KC +DL ++VR+ ++ G
Sbjct: 7 NAIVFNASKGEAFTLASNYKALRKRLR-GNWKIQSLKDE------ITSEKLFGVK--------------LWITAGPREKFSAAEFSVLKKFL-EDGGAILVMLREG-GETRYGTN------INFLLEEYGIVFNNDAVVRNVYY-KYHHPKEALISDGVLNRGISEAARKTLLETTDEDGSGRDAQ-------ALTFVYPFGATLNVMKPAVAVLSTGSVCFPLNRPILAFYQHELKEEGRRVEDEARDRGCLSSRAEKLGRRKTRALGEEERYGKEEQQKVKEQKSQGGKMAALGSSHMFSDQYLDKEENGKIMDVLFQWLT----------------------------------TSDIHLNQMDMED----PEISDYTMLPDTAALSEQLRVCLQ------------------EGDENPRDFTKLFDTA---------LYQL-DTTALPSVIKAYEQLNVKHE-PLQLIQPQFETPLPAFQPAVFPPAFRELPPPPLELFDLDETFSSEKARLAEITNKCTD-----------DDLEFYVRKCGDILG 442
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|566019594|gb|ETI42505.1| (hypothetical protein F443_12383 [Phytophthora parasitica P1569] >gi|567985572|gb|ETL35911.1| hypothetical protein L916_12030 [Phytophthora parasitica] >gi|568014968|gb|ETL89145.1| hypothetical protein L917_11871 [Phytophthora parasitica] >gi|570323171|gb|ETO71119.1| hypothetical protein F444_12483 [Phytophthora parasitica P1976]) HSP 1 Score: 170.629 bits (431), Expect = 7.594e-43 Identity = 158/547 (28.88%), Postives = 238/547 (43.51%), Query Frame = 0
Query: 51 VVFNAVKGENY---QNMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLS----SLPETEDDQAGKDE-----RQE---------EEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRG 576
V+F+A K E + +K+L R+L+ +V +NK D+ +++ S+ VFA + F++ E L FL G S+LL+L EG E+ + LN WL+ +G+ + DAV+R H ++ HPKEV +S L ++ G+ + R+ E+ G +FVYPYG +L+V PA LLSSG SYP +RPV+AAW+ GG + GRL+V G+A + D W+D+E+N L ++IFRWLL D+S S H A P L + P + L+ +LR C+Q + + D L + L+ +L+PE + + LG++ E PL + P+F CP PPL+ AVFPP+ PPPP L+QFDLD+ FAS +LA+L +KC S +DL Y+VRE+A++ G
Sbjct: 18 VLFDASKKEQFYPNSGLKKLARKLKPL-CRVDVNK-DDLSRDRIKDA-------------------SVLVFAGIRERFSSTEFATLKEFL-NGGGSILLMLGEG-------GEQTFDTNLNGWLKDFGIFVNPDAVIRTVYH-KYHHPKEVLISSGVVNRELARMVNELYGRKDLLISGREAKPTGPGGALEKDQKGLTFVYPYGATLTVKKPAASLLSSGFISYPVNRPVVAAWQE--------------------------------------GGVAAPASKSGRLIVFGSAQCFVDEWIDKEENAKLQEIIFRWLLK---------------------DKSISL----------------NHQDAEDPDLNEYVRLPDTQALSDRLRSCMQ----ESEELPKDFTRLF-----------------------DDSLFKF-DTSLIPEAVNLYRELGVKHE-PLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKC-----------SDDDLEYYVRESADILG 419
BLAST of EWM22806.1 vs. NCBI_GenBank
Match: gi|675199657|ref|XP_008908713.1| (hypothetical protein PPTG_13977 [Phytophthora parasitica INRA-310] >gi|568045247|gb|ETM42403.1| hypothetical protein L914_11941 [Phytophthora parasitica] >gi|568091387|gb|ETN06211.1| hypothetical protein PPTG_13977 [Phytophthora parasitica INRA-310] >gi|570979407|gb|ETP40350.1| hypothetical protein F442_12304 [Phytophthora parasitica P10297] >gi|970641135|gb|KUF83398.1| Intraflagellar Transport Protein 52 [Phytophthora nicotianae] >gi|970660798|gb|KUF98319.1| hypothetical protein AM588_10008957 [Phytophthora nicotianae]) HSP 1 Score: 170.244 bits (430), Expect = 8.393e-43 Identity = 158/547 (28.88%), Postives = 238/547 (43.51%), Query Frame = 0
Query: 51 VVFNAVKGENY---QNMKRLFRRLRRAGLKVTINKHSDVPSILVREGQHVGIRPDASHGAPALSLPSLAVFACPQSAFTTHEEQALSRFLLVEGQSVLLLLSEGVGNNQCGSEEGPSSLLNRWLQPWGMHAHHDAVLRRRRHPRFPHPKEVFLSLS----SLPETEDDQAGKDE-----RQE---------EEGDPGFSFVYPYGCSLSVAPPAKVLLSSGPYSYPAHRPVLAAWEGRAEGEDGGEGKGAGRRGEAGKEEEEWLNGGERGKGRGGGGAGGGGRRGGRLVVLGAADMWTDAWLDQEDNGWLADVIFRWLLHREPDAESSAPPSNLGQASFSHDRSPSRLVQLLFCGDARPEQERAHDPALPPSLQPRLCTPRVRDLAQQLRPCLQGKMYSTPQSHVDLNNLLNPPDEGGREGGRGRGKAGVPPGEEPPLYALRPNTLLPEVLATHHALGLEPEHPLRPVAPEFVCPQPPLRLAVFPPSFAPPPPPTLEQFDLDQVFASPRTQLARLFHKCASSRLEGAKEGSREDLSYFVREAAEVRG 576
V+F+A K E + +K+L R+L+ +V +NK D+ +++ S+ VFA + F++ E L FL G S+LL+L EG E+ + LN WL+ +G+ + DAV+R H ++ HPKEV +S L ++ G+ + R+ E+ G +FVYPYG +L+V PA LLSSG SYP +RPV+AAW+ GG + GRL+V G+A + D W+D+E+N L ++IFRWLL D+S S H A P L + P + L+ +LR C+Q + + D L + L+ +L+PE + + LG++ E PL + P+F CP PPL+ AVFPP+ PPPP L+QFDLD+ FAS +LA+L +KC S +DL Y+VRE+A++ G
Sbjct: 18 VLFDASKKEQFYPTSGLKKLARKLKPL-CRVDVNK-DDLSRDRIKDA-------------------SVLVFAGIRERFSSTEFATLKEFL-NGGGSILLMLGEG-------GEQTFDTNLNGWLKDFGIFVNPDAVIRTVYH-KYHHPKEVLISSGVVNRELARMVNELYGRKDLLISGREAKPTGPGGALEKDQKGLTFVYPYGATLTVKKPAASLLSSGFISYPVNRPVVAAWQE--------------------------------------GGVAAPASKSGRLIVFGSAQCFVDEWIDKEENAKLQEIIFRWLLK---------------------DKSISL----------------NHQDAEDPDLNEYVRLPDTQALSDRLRSCMQ----ESEELPKDFTRLF-----------------------DDSLFKF-DTSLIPEAVNLYRELGVKHE-PLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKC-----------SDDDLEYYVRESADILG 419 The following BLAST results are available for this feature:
BLAST of EWM22806.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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