EWM22813.1, cds7862 (CDS) Nannochloropsis gaditana

Overview
NameEWM22813.1
Unique Namecds7862
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037247.1:17822..17848 +
Alignment locationKK037247.1:18033..18433 +
Alignment locationKK037247.1:18862..19086 +
Alignment locationKK037247.1:19352..19439 +
Alignment locationKK037247.1:19672..19839 +
Alignment locationKK037247.1:19987..20463 +

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Properties
Property NameValue
Protein idEWM22813.1
ProductCeramidase
Orig transcript idgnl|cribi|Naga_100250g3.10532.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037247.1supercontigKK037247.1:17822..17848 +
KK037247.1supercontigKK037247.1:18033..18433 +
KK037247.1supercontigKK037247.1:18862..19086 +
KK037247.1supercontigKK037247.1:19352..19439 +
KK037247.1supercontigKK037247.1:19672..19839 +
KK037247.1supercontigKK037247.1:19987..20463 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016811hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006629lipid metabolic process
GO:0006672ceramide metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR008901Ceramidase
Homology
[Close]
BLAST of EWM22813.1 vs. NCBI_GenBank
Match: gi|585103439|gb|EWM22813.1| (Ceramidase [Nannochloropsis gaditana])

HSP 1 Score: 932.554 bits (2409), Expect = 0.000e+0
Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 0 
Query:    1 MLDTKEAWQTPVRHFCESAHDHAGPEMWSAFSSLGITFFACLCLFTGQHSNVLVKMCAAVLAWCGIGSFGFHWTLSEAWSFLDTFPMTIAAVLGMYLCWAVLIDEIFFFLYRPLSLVPRDGEPAPMTQGWGWKPPPPPLLFKRKSQCMSVLALLASGLLIWSLVLNAVYGNVFYDTLFTVLGLFLLASALTPACLPPEATEAGKSGEPEGGSIHGGGIPRPPPMHGWLLALRVKERHYMPVLGGETQALSVILLGLLLVLFAAIIWETSEQLCPLPHWGWLRYLRLHALWHLSIGYGVYLLLQASALLSAPSLFGKRAMFDNRHSRRIWINTFFPRVVYLNCTCQSGRESGGREGKGDREWWVICVECGREERRRAEVESGGWDVRQRESEREGNGGLIGGSEGGRLRSRSACSTVGSEGSASTYRSSSASSSPLHPSSTSFPCSFAVSSSSSLDRNEEGR 461
            MLDTKEAWQTPVRHFCESAHDHAGPEMWSAFSSLGITFFACLCLFTGQHSNVLVKMCAAVLAWCGIGSFGFHWTLSEAWSFLDTFPMTIAAVLGMYLCWAVLIDEIFFFLYRPLSLVPRDGEPAPMTQGWGWKPPPPPLLFKRKSQCMSVLALLASGLLIWSLVLNAVYGNVFYDTLFTVLGLFLLASALTPACLPPEATEAGKSGEPEGGSIHGGGIPRPPPMHGWLLALRVKERHYMPVLGGETQALSVILLGLLLVLFAAIIWETSEQLCPLPHWGWLRYLRLHALWHLSIGYGVYLLLQASALLSAPSLFGKRAMFDNRHSRRIWINTFFPRVVYLNCTCQSGRESGGREGKGDREWWVICVECGREERRRAEVESGGWDVRQRESEREGNGGLIGGSEGGRLRSRSACSTVGSEGSASTYRSSSASSSPLHPSSTSFPCSFAVSSSSSLDRNEEGR
Sbjct:    1 MLDTKEAWQTPVRHFCESAHDHAGPEMWSAFSSLGITFFACLCLFTGQHSNVLVKMCAAVLAWCGIGSFGFHWTLSEAWSFLDTFPMTIAAVLGMYLCWAVLIDEIFFFLYRPLSLVPRDGEPAPMTQGWGWKPPPPPLLFKRKSQCMSVLALLASGLLIWSLVLNAVYGNVFYDTLFTVLGLFLLASALTPACLPPEATEAGKSGEPEGGSIHGGGIPRPPPMHGWLLALRVKERHYMPVLGGETQALSVILLGLLLVLFAAIIWETSEQLCPLPHWGWLRYLRLHALWHLSIGYGVYLLLQASALLSAPSLFGKRAMFDNRHSRRIWINTFFPRVVYLNCTCQSGRESGGREGKGDREWWVICVECGREERRRAEVESGGWDVRQRESEREGNGGLIGGSEGGRLRSRSACSTVGSEGSASTYRSSSASSSPLHPSSTSFPCSFAVSSSSSLDRNEEGR 461
[Close]
BLAST of EWM22813.1 vs. NCBI_GenBank
Match: gi|553186700|ref|XP_005854473.1| (hypothetical protein NGA_0239300 [Nannochloropsis gaditana CCMP526] >gi|422294590|gb|EKU21890.1| hypothetical protein NGA_0239300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 395.971 bits (1016), Expect = 1.449e-132
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 
Query:    1 MLDTKEAWQTPVRHFCESAHDHAGPEMWSAFSSLGITFFACLCLFTGQHSNVLVKMCAAVLAWCGIGSFGFHWTLSEAWSFLDTFPMTIAAVLGMYLCWAVLIDEIFFFLYRPLSLVPRDGEPAPMTQGWGWKPPPPPLLFKRKSQCMSVLALLASGLLIWSLVLNAVYGNVFYDTLFTVLGLFLLASALT 191
            MLDTKEAWQTPVRHFCESAHDHAGPEMWSAFSSLGITFFACLCLFTGQHSNVLVKMCAAVLAWCGIGSFGFHWTLSEAWSFLDTFPMTIAAVLGMYLCWAVLIDEIFFFLYRPLSLVPRDGEPAPMTQGWGWKPPPPPLLFKRKSQCMSVLALLASGLLIWSLVLNAVYGNVFYDTLFTVLGLFLLASALT
Sbjct:    1 MLDTKEAWQTPVRHFCESAHDHAGPEMWSAFSSLGITFFACLCLFTGQHSNVLVKMCAAVLAWCGIGSFGFHWTLSEAWSFLDTFPMTIAAVLGMYLCWAVLIDEIFFFLYRPLSLVPRDGEPAPMTQGWGWKPPPPPLLFKRKSQCMSVLALLASGLLIWSLVLNAVYGNVFYDTLFTVLGLFLLASALT 191
The following BLAST results are available for this feature:
BLAST of EWM22813.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103439|gb|EWM22813.1|0.000e+0100.00Ceramidase [Nannochloropsis gaditana][more]
gi|553186700|ref|XP_005854473.1|1.449e-132100.00hypothetical protein NGA_0239300 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7884rna7884Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications