EWM29904.1, cds784 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|585112487|gb|EWM29904.1| (Methyltransferase FkbM [Nannochloropsis gaditana]) HSP 1 Score: 759.985 bits (1961), Expect = 0.000e+0 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0 Query: 1 MPAHAAYRKFALARAVQVARSPCMLFLGALSGAILGSIIGGHMAQETLHPYTLAATNTNSGGESEACPEWTISALTQKRMQRDYCIRRFTGEVPEQDLVKTKLLAPDQTHMDFIVYDGNDIVSGAIRSNGHWEHHLSTALVMVLSKVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIGRMPETRRQAVLQFFYGLGYQASTTGFFQGLGQPKDLPGTEDVYLVLLQA 365 MPAHAAYRKFALARAVQVARSPCMLFLGALSGAILGSIIGGHMAQETLHPYTLAATNTNSGGESEACPEWTISALTQKRMQRDYCIRRFTGEVPEQDLVKTKLLAPDQTHMDFIVYDGNDIVSGAIRSNGHWEHHLSTALVMVLSKVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIGRMPETRRQAVLQFFYGLGYQASTTGFFQGLGQPKDLPGTEDVYLVLLQA Sbjct: 1 MPAHAAYRKFALARAVQVARSPCMLFLGALSGAILGSIIGGHMAQETLHPYTLAATNTNSGGESEACPEWTISALTQKRMQRDYCIRRFTGEVPEQDLVKTKLLAPDQTHMDFIVYDGNDIVSGAIRSNGHWEHHLSTALVMVLSKVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIGRMPETRRQAVLQFFYGLGYQASTTGFFQGLGQPKDLPGTEDVYLVLLQA 365
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|1027023874|ref|XP_016604665.1| (FkbM family methyltransferase [Spizellomyces punctatus DAOM BR117] >gi|907090137|gb|KNC96625.1| FkbM family methyltransferase [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 139.043 bits (349), Expect = 4.571e-34 Identity = 115/354 (32.49%), Postives = 160/354 (45.20%), Query Frame = 0 Query: 20 RSPCMLF-LGALSGAILGSIIGGHMAQETLHPYTLAATNTNSGGESEACPEWTISALTQKRMQRD-YCIRRFTGEVPEQDLVKTKLLAPDQTHMDFIVYD-GNDIVSGAIRSNGHWEHHLSTALVMVLSKVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGET--FFTKALIPYIVFEI-----GRMPETRRQAVLQFFYGLGYQASTTGFFQGLGQPKDLPGTEDVYLVLL 363 RSP M F L A++ + S+ G + T S G ++ E I+ T+ ++++ +C R P D K + D +YD G D VS I G WEH + ++ L + RG ++ LDIGGNVG +TV A A G V FEP+PQNE +IR +LC N V + GLG++P C+ S N N GNGI+ C + Q R + + LD ++ + + FG MKMDVEGFE EVLKGGE F T P I+ E R+ +L G GY+ T+ +F + KD T VY L Sbjct: 9 RSPRMWFALAAVAFLLFVSVPWGRPTEIT----------RTSFGMPKSWYENKIAWRTRAAIEQNAFC--RTAAVTPLPDKTVEKTIDLDGVSYKLTLYDTGMDAVSAIIIRTGVWEHAATRQVLWALKLANDVRG--QDRATFLDIGGNVGWYTVTAAAHGHRVAVFEPMPQNEYLIRRSLCANRDLARHVDYYAMGLGAQPDECRIISH-NENHGNGILQCGEDSKKPVADQHGVRADVSIHTLDGIVQDDRRAGE------FGVMKMDVEGFESEVLKGGEKSLFATDNRPPMIMMEYIPSLQARLLGDDPTGILTLLDGYGYEIRTS-WFTHEAKAKDSTETGKVYNSFL 340
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|678318282|emb|CDW85353.1| (UNKNOWN [Stylonychia lemnae]) HSP 1 Score: 118.627 bits (296), Expect = 1.082e-26 Identity = 75/228 (32.89%), Postives = 106/228 (46.49%), Query Frame = 0 Query: 120 DIVSGAIRSNGHWEHHLSTALVMVLSKVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPD----GQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIG-RMPETRRQAVLQFFYGLGYQASTTGF 342 DI+S I WE H S +V L K++ P ++ LLDIG N+G T A + ++V+ FEPL QN I +C N + L LG++ C +S P N NGI+ C I H +I R ++ + LD + PDI G +K+DVE FE +V GG+ F + IPYIV E + ++ F LGY+A T F Sbjct: 103 DIISYVIFETNSWEDHNSIQIVNALKKIS--IQYPDYKIALLDIGANLGWFTFMAASLDYNVIAFEPLDQNYKAIEYAMCLNQNVSNLIQLEKFALGAKNETCNLYSQPQ-NTQNGIIRCGDDINDHSKVVDVSNVILRQEVPIRTLDSY------TKTISPDIKIGVLKIDVEEFEYDVFVGGKNFLKEHKIPYIVQEYSLKSYGAHQEDHFNLFKDLGYEARLTSF 321
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|678329198|emb|CDW79770.1| (UNKNOWN [Stylonychia lemnae]) HSP 1 Score: 118.627 bits (296), Expect = 3.660e-26 Identity = 75/228 (32.89%), Postives = 106/228 (46.49%), Query Frame = 0 Query: 120 DIVSGAIRSNGHWEHHLSTALVMVLSKVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPD----GQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIG-RMPETRRQAVLQFFYGLGYQASTTGF 342 DI+S I WE H S +V L K++ P ++ LLDIG N+G T A + ++V+ FEPL QN I +C N + L LG++ C +S P N NGI+ C I H +I R ++ + LD + PDI G +K+DVE FE +V GG+ F + IPYIV E + ++ F LGY+A T F Sbjct: 187 DIISYVIFETNSWEDHNSIQIVNALKKIS--IQYPDYKIALLDIGANLGWFTFMAASLDYNVIAFEPLDQNYKAIEYAMCLNQNVSNLIQLEKFALGAKNETCNLYSQPQ-NTQNGIIRCGDDINDHSKVVDVSNVILRQEVPIRTLDSYT------KTISPDIKIGVLKIDVEEFEYDVFVGGKNFLKEHKIPYIVQEYSLKSYGAHQEDHFNLFKDLGYEARLTSF 405
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|926796690|ref|XP_013906081.1| (hypothetical protein MNEG_0895 [Monoraphidium neglectum] >gi|761977316|gb|KIZ07062.1| hypothetical protein MNEG_0895 [Monoraphidium neglectum]) HSP 1 Score: 115.161 bits (287), Expect = 1.773e-25 Identity = 83/254 (32.68%), Postives = 120/254 (47.24%), Query Frame = 0 Query: 107 DQTHMDFIVYDGNDIVSGAIRSNGHWEHHLSTALVMVLSK---------VAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQ-------HPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGETFFTKALIPYIVFEI--GRMPETRRQAVLQFFYGLGYQASTTGF 342 D+T++ VY G+DIVSG + HWE +V + DR P + D+GGNVG + A A G V FEP+ N A++R +LC N +RV L+ GL ++ + CK +S + NRGNGI +C + Q + RG + +RLD ++ D MKMDVEG+E EVLKG TK + +I+ E+ G + + A L+ LGY S+ F Sbjct: 36 DKTNVTAYVYAGDDIVSGWLAGVHHWEAKDVEEMVYAMGAPVPQSPGDLAHPDRWKPPAAPFVADVGGNVGTFLLNAAARGAVVAAFEPMANNIALLRASLCANPWLMDRVALYGTGLSTKASKCKIYSDTS-NRGNGITDCEKTEEQVIAWFKSEFNITAAVRGSITTMRLDSII-----------DHDVQVMKMDVEGYESEVLKGAHGLLTKHNVWHIMTEVNYGLLKAEGQAAFLKLINDLGYYISSISF 277
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|552811978|ref|XP_005843604.1| (hypothetical protein CHLNCDRAFT_140178 [Chlorella variabilis] >gi|307103240|gb|EFN51502.1| hypothetical protein CHLNCDRAFT_140178 [Chlorella variabilis]) HSP 1 Score: 110.153 bits (274), Expect = 3.928e-24 Identity = 69/189 (36.51%), Postives = 94/189 (49.74%), Query Frame = 0 Query: 110 HMDFIVYDG----NDIVSGAIRSNGHWEHHLSTALVMVLSKVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPE 294 ++ VY G +DIVS +I G WE H + +V L + + RGL EQV+ +DIG NVG TV A A G+SV+ FE N IR LC N Q+RV L GL C +A + N G+G V CN L+ GQ +++ LD + +G G +K+DVEGFE + Sbjct: 103 NVSMWVYQGTSKHHDIVSSSIEQGGAWEPHETREVVTKLERFQQARGLSKEQVYFIDIGANVGYFTVNAAALGYSVIAFEATTPNAFAIRQTLCSNPQLQKRVALVNKGLSDAIERCAVVAASD-NVGDGHVECNKDAADLAASGLVVHGQFDLITLDSYV----EGHLEALRQKVGVVKIDVEGFEDK 286
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|585106497|gb|EWM24875.1| (Methyltransferase FkbM [Nannochloropsis gaditana]) HSP 1 Score: 108.612 bits (270), Expect = 1.919e-23 Identity = 71/228 (31.14%), Postives = 112/228 (49.12%), Query Frame = 0 Query: 122 VSGAIRSNGHWEHHLSTALVMVLSKVA-EDRGLPH----------EQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFG---AMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIGRMPETRRQAVLQFFYGLGY 335 VS I +G+WE + L+++L + + R H +++ +LD+GGN+GA+T+ AGF V+TFE + +N IR +C N +ERV L GL + C N G+GI C G + + ++V LD L + P G A+KMDVEGFE V++GG+ F + + ++ E G MP +R+ +L++F GY Sbjct: 15 VSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEETCT-LVVDKENIGDGITRCQGQ-GVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGY 240
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|678331459|emb|CDW78597.1| (UNKNOWN [Stylonychia lemnae]) HSP 1 Score: 103.219 bits (256), Expect = 5.657e-22 Identity = 61/196 (31.12%), Postives = 100/196 (51.02%), Query Frame = 0 Query: 126 IRSNGHWEHHLSTALVMVLS-------KVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGETFFTKALIPYIVFE 314 +++ +L A +M+L KV ED+ +V +D+GGN+G T+ A F V TFEP+ N ++ +LC +E+V +F GLG + LC +S + N NG+V C + +R +++ +LDD + +P D++ G MK+D+EG+E + KGG F + IPYI+ E Sbjct: 8 VKTGRQQTSNLVRASMMILKFLFGWHPKVNEDK-----RVAFIDVGGNIGWFTLVAARNEFLVYTFEPMKSNTDALKYSLCLQPSLKEKVQIFEYGLGDQNYLCGIYSL-DINIQNGLVKCESQFAAGAE----FREFIQLKKLDDFI------DNIPDDVLIGVMKIDIEGYEYFLFKGGSQFINRYKIPYIIIE 187
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|553182892|ref|XP_005853802.1| (methyltransferase family [Nannochloropsis gaditana CCMP526] >gi|422295258|gb|EKU22557.1| methyltransferase family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.145 bits (261), Expect = 1.191e-21 Identity = 78/272 (28.68%), Postives = 123/272 (45.22%), Query Frame = 0 Query: 101 TKLLAPDQTHMDFIVYDGNDIVSGAIRSNGHWEHHLSTALVMVLSKVA-EDRGLPH----------EQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSE---------------PTLCKQFSAP--------NYNRGNGIVNCNGSIPQHPDGQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFG---AMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIGRMPETRRQAVLQFFYGLGY 335 T+ +A ++ Y D VS I +G+WE + L+++L + + R H +++ +LD+GGN+GA+T+ AGF V+TFE + +N IR +C N +ERV L GL + P Q S P N G+GI C G + + ++V LD L + P G A+KMDVEGFE V++GG+ F + + ++ E G MP +R+ +L++F GY Sbjct: 56 TQWVAEKDRNVTLFGYAEKDKVSRDIAMHGYWEMENMSVLLLLLERARWQRREWRHPESPSRPPRRDELVMLDVGGNLGAYTLCLATAGFRVLTFEAMRRNIQAIREGICRNSGLKERVILLEKGLAEKEESRPSSLSRTFDFLPVPTAQSSQPQTCTLVVDKENIGDGITRCQGQ-GVSLGSEEVREDAIQVTTLDRALYCPQSSRDAVPSFYTGRPAALKMDVEGFEMLVVQGGQGFLNTSDLAVVLHENGHMPFEKRKYLLEYFVDRGY 326
BLAST of EWM29904.1 vs. NCBI_GenBank
Match: gi|678332191|emb|CDW78221.1| (UNKNOWN [Stylonychia lemnae]) HSP 1 Score: 102.064 bits (253), Expect = 2.966e-21 Identity = 70/220 (31.82%), Postives = 103/220 (46.82%), Query Frame = 0 Query: 140 LVMVLSKVAEDRGLPHEQVHLLDIGGNVGAHTVYAQAAGFSVVTFEPLPQNEAIIRTNLCFNDPKQERVTLFTNGLGSEPTLCKQFSAPNYNRGNGIVNCNGSIPQHPD----GQLIYRGQMEVLRLDDVLLPCKDGTQLPPDIVFGAMKMDVEGFEPEVLKGGETFFTKALIPYIVFEIGRMPE-TRRQAVLQFFYGLGYQASTTGF----FQGLGQPK 350 L+ L KV+ P +++ LLDIG N+G T A + ++V+ FEP N I +C N + L LG++ C +S +YN NGI+ C I H +++R ++ + LD + P+I G +K+DVE FE +VL GG+TF IPYIV E + ++ F LGY A TGF FQ + K Sbjct: 40 LINALKKVS--IQYPDQKIALLDIGANLGWFTFIAASLDYNVIAFEPYEPNYKAIEYAMCLNQNVSNLIQLEKFALGTKNESCNLYSH-DYNTQNGIIRCGDDINDHSKLLDVSIVLFRQEVPIRTLDSY------SKTISPNIKIGVLKIDVEEFEYDVLLGGKTFLKDHKIPYIVQEYSLISYGANQEDHFNIFKDLGYVARLTGFNGQEFQTFNELK 250 The following BLAST results are available for this feature:
BLAST of EWM29904.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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