EWM22850.1, cds7822 (CDS) Nannochloropsis gaditana

Overview
NameEWM22850.1
Unique Namecds7822
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:108342..108475 -
Alignment locationCM002474.1:108136..108206 -
Alignment locationCM002474.1:107893..107989 -
Alignment locationCM002474.1:107478..107718 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22850.1
Productcell division cycle protein 27
Orig transcript idgnl|cribi|Naga_101043g1.5895.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:108342..108475 -
CM002474.1supercontigCM002474.1:108136..108206 -
CM002474.1supercontigCM002474.1:107893..107989 -
CM002474.1supercontigCM002474.1:107478..107718 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Homology
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|585103492|gb|EWM22850.1| (cell division cycle protein 27 [Nannochloropsis gaditana])

HSP 1 Score: 368.237 bits (944), Expect = 6.077e-129
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
Query:    1 MSPFGNQTHPSISDWGLPNASKGQWDGKEGLSLPPEAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGRREGGRAGGDKDGVICLLLRHSGDDRRSAQS 180
            MSPFGNQTHPSISDWGLPNASKGQWDGKEGLSLPPEAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGRREGGRAGGDKDGVICLLLRHSGDDRRSAQS
Sbjct:    1 MSPFGNQTHPSISDWGLPNASKGQWDGKEGLSLPPEAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGRREGGRAGGDKDGVICLLLRHSGDDRRSAQS 180          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|953488090|emb|CEG48107.1| (DNA-binding cell division cycle control protein [Plasmopara halstedii])

HSP 1 Score: 82.8037 bits (203), Expect = 3.268e-15
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 0
Query:   36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLG 123
            E  + + IQRYLD  ++  A FLAERL A  P E +  LLATC+ R+G       +L+G T A +RYL A  C +L+R  E E+ALLG
Sbjct:    6 EVALIKQIQRYLDTFVYDNARFLAERLVAHNPNEENLLLLATCYFRKGQAAQAAAVLNGATSADNRYLLASCCFQLNRLIETESALLG 93          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|301117346|ref|XP_002906401.1| (anaphase-promoting complex subunit, putative [Phytophthora infestans T30-4] >gi|262107750|gb|EEY65802.1| anaphase-promoting complex subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 78.1814 bits (191), Expect = 1.062e-13
Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 0
Query:   43 IQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLG 123
            +QRYLDL ++  A FLAERL A  P+E +  LLA+C+ R+G     V +L G T A++RYL A  C + ++  EAE ALLG
Sbjct:    9 VQRYLDLYVYDNARFLAERLVAHHPSEENALLLASCYYRKGQVDRAVEVLSGATRAENRYLLARCCFQQNKLVEAENALLG 89          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|570972863|gb|ETP35641.1| (hypothetical protein F442_16265 [Phytophthora parasitica P10297])

HSP 1 Score: 78.1814 bits (191), Expect = 1.455e-13
Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0
Query:   36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155
            EA +   +QRYL+L ++  A FLAERL A  P+E +  LLATC+ R+G       +L+G   A++RYL A  C + ++ AEAE ALLG +      P   +++     G +  GR  R G R
Sbjct:    6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNQMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|570318550|gb|ETO66498.1| (hypothetical protein F444_16390 [Phytophthora parasitica P1976])

HSP 1 Score: 77.7962 bits (190), Expect = 1.557e-13
Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0
Query:   36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155
            EA +   +QRYL+L ++  A FLAERL A  P+E +  LLATC+ R+G       +L+G   A++RYL A  C + ++ AEAE ALLG +      P   +++     G +  GR  R G R
Sbjct:    6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNQMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|568010434|gb|ETL84622.1| (hypothetical protein L917_15655 [Phytophthora parasitica])

HSP 1 Score: 77.7962 bits (190), Expect = 1.559e-13
Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0
Query:   36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155
            EA +   +QRYL+L ++  A FLAERL A  P+E +  LLATC+ R+G       +L+G   A++RYL A  C + ++ AEAE ALLG +      P   +++     G +  GR  R G R
Sbjct:    6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNQMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|675205345|ref|XP_008911557.1| (hypothetical protein PPTG_16038 [Phytophthora parasitica INRA-310] >gi|568088151|gb|ETN03013.1| hypothetical protein PPTG_16038 [Phytophthora parasitica INRA-310])

HSP 1 Score: 77.7962 bits (190), Expect = 1.945e-13
Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0
Query:   36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155
            EA +   +QRYL+L ++  A FLAERL A  P+E +  LLATC+ R+G       +L+G   A++RYL A  C + ++ AEAE ALLG +      P   +++     G +  GR  R G R
Sbjct:    6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGALRAENRYLLACCCFQQNQMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|566014793|gb|ETI37704.1| (hypothetical protein F443_16421 [Phytophthora parasitica P1569])

HSP 1 Score: 77.411 bits (189), Expect = 2.041e-13
Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155
            EA +   +QRYL+L ++  A FLAERL A  P+E +  LLATC+ R+G       +L+G   A++RYL A  C + +  AEAE ALLG +      P   +++     G +  GR  R G R
Sbjct:    6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNHMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|570942355|gb|ETP07612.1| (hypothetical protein F441_16250 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 77.411 bits (189), Expect = 2.042e-13
Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155
            EA +   +QRYL+L ++  A FLAERL A  P+E +  LLATC+ R+G       +L+G   A++RYL A  C + +  AEAE ALLG +      P   +++     G +  GR  R G R
Sbjct:    6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNHMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127          
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|970632820|gb|KUF78853.1| (Cell division cycle protein 27 B [Phytophthora nicotianae])

HSP 1 Score: 77.411 bits (189), Expect = 2.157e-13
Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155
            EA +   +QRYL+L ++  A FLAERL A  P+E +  LLATC+ R+G       +L+G   A++RYL A  C + +  AEAE ALLG +      P   +++     G +  GR  R G R
Sbjct:    6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNHMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127          
The following BLAST results are available for this feature:
BLAST of EWM22850.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103492|gb|EWM22850.1|6.077e-129100.00cell division cycle protein 27 [Nannochloropsis ga... [more]
gi|953488090|emb|CEG48107.1|3.268e-1546.59DNA-binding cell division cycle control protein [P... [more]
gi|301117346|ref|XP_002906401.1|1.062e-1348.15anaphase-promoting complex subunit, putative [Phyt... [more]
gi|570972863|gb|ETP35641.1|1.455e-1338.52hypothetical protein F442_16265 [Phytophthora para... [more]
gi|570318550|gb|ETO66498.1|1.557e-1338.52hypothetical protein F444_16390 [Phytophthora para... [more]
gi|568010434|gb|ETL84622.1|1.559e-1338.52hypothetical protein L917_15655 [Phytophthora para... [more]
gi|675205345|ref|XP_008911557.1|1.945e-1338.52hypothetical protein PPTG_16038 [Phytophthora para... [more]
gi|566014793|gb|ETI37704.1|2.041e-1338.52hypothetical protein F443_16421 [Phytophthora para... [more]
gi|570942355|gb|ETP07612.1|2.042e-1338.52hypothetical protein F441_16250 [Phytophthora para... [more]
gi|970632820|gb|KUF78853.1|2.157e-1338.52Cell division cycle protein 27 B [Phytophthora nic... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7843rna7843Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications