EWM22855.1, cds7821 (CDS) Nannochloropsis gaditana

Overview
NameEWM22855.1
Unique Namecds7821
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:105545..105616 -
Alignment locationCM002474.1:105048..105140 -
Alignment locationCM002474.1:104870..104959 -
Alignment locationCM002474.1:104597..104745 -
Alignment locationCM002474.1:104247..104394 -
Alignment locationCM002474.1:104015..104106 -
Alignment locationCM002474.1:103739..103820 -
Alignment locationCM002474.1:103399..103569 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22855.1
ProductTetratricopeptide TPR-1
Orig transcript idgnl|cribi|Naga_100243g6.9378.mrna
GeneAPC3-cdc27
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:105545..105616 -
CM002474.1supercontigCM002474.1:105048..105140 -
CM002474.1supercontigCM002474.1:104870..104959 -
CM002474.1supercontigCM002474.1:104597..104745 -
CM002474.1supercontigCM002474.1:104247..104394 -
CM002474.1supercontigCM002474.1:104015..104106 -
CM002474.1supercontigCM002474.1:103739..103820 -
CM002474.1supercontigCM002474.1:103399..103569 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0016043cellular component organization
GO:0006464cellular protein modification process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR001440TPR_1
IPR019734TPR_repeat
Homology
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|585103499|gb|EWM22855.1| (Tetratricopeptide TPR-1 [Nannochloropsis gaditana])

HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0
Query:    1 MLGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEEEGEEEAEENF 298
            MLGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEEEGEEEAEENF
Sbjct:    1 MLGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEEEGEEEAEENF 298          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|298711117|emb|CBJ32345.1| (Putative subunit of the Anaphase Promoting Complex [Ectocarpus siliculosus])

HSP 1 Score: 397.512 bits (1020), Expect = 4.394e-135
Identity = 185/287 (64.46%), Postives = 228/287 (79.44%), Query Frame = 0
Query:    2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEE 288
            +G+A+FE ADY  A+ ALE MQ+  P+R+ GLDLLST LWHLK +V+L +LAQKV E +RR+P+ WCVVGNC SLQKEHETAL+FFQRAI +D    YAYTLCGHEYV N D DKAVAC+R A+R D RHYNAWYGLG+IY RQEKY++AEYHF RAL IN  SSVL  YLGMV HAN + L+AL+ML  AS  +P NPQA FQRANVLM ++RY EA  ELE VRD+ P+E++V+FL+GK+CK+LG+ + A+RHF +ALD   KD NL+KAA+D+L  P+  EEE+
Sbjct:  123 VGRAYFERADYGNAKSALESMQRYDPHRMEGLDLLSTTLWHLKRDVELSYLAQKVSEFDRRSPQTWCVVGNCFSLQKEHETALRFFQRAIQLDADMTYAYTLCGHEYVANEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALKINPQSSVLRVYLGMVLHANKRYLEALDMLELASKSEPRNPQASFQRANVLMSMERYAEALRELEVVRDNVPKESAVYFLMGKVCKKLGQTDAAMRHFTIALDLHNKDKNLIKAAVDRLNDPDMDEEEK 409          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|676392705|ref|XP_009039630.1| (hypothetical protein AURANDRAFT_30520, partial [Aureococcus anophagefferens] >gi|323449907|gb|EGB05792.1| hypothetical protein AURANDRAFT_30520, partial [Aureococcus anophagefferens])

HSP 1 Score: 384.8 bits (987), Expect = 8.150e-130
Identity = 177/280 (63.21%), Postives = 222/280 (79.29%), Query Frame = 0
Query:    2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELP 281
            +GK  FE ADY  A ++L  M++V+P+R+AGL+LLSTALWH K +V+LC+LA+  ++ + R+PEAWC  GNC+SLQKEH+ A++ FQRAIAVDP F YAYTLCGHEYV N D +KA+  YR+A+R+D+RHYNAWYGLG IY+RQEKYELAEYHF RAL  N  SSVLH YLGM  HAN K   AL  L RA+ ++P NPQARFQ ANVL+ LD+Y++A  EL  V DHAPREASVHFL+GK+CK+LG+ + A+ HF  ALD +PKD NL+K+AID+LE P
Sbjct:  129 VGKVHFEAADYEAAVRSLRTMRRVEPHRMAGLELLSTALWHFKDDVELCYLARHCVDFDARSPEAWCASGNCLSLQKEHDGAIRCFQRAIAVDPRFAYAYTLCGHEYVANEDFEKAIGMYRHAMRIDERHYNAWYGLGAIYYRQEKYELAEYHFDRALCHNPTSSVLHCYLGMTLHANQKCHDALRHLRRAALMEPKNPQARFQCANVLISLDKYEDALAELRAVSDHAPREASVHFLMGKVCKKLGRLDDAMMHFTFALDLEPKDNNLIKSAIDRLEEP 408          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|223995777|ref|XP_002287562.1| (hypothetical protein THAPSDRAFT_39726 [Thalassiosira pseudonana CCMP1335] >gi|220976678|gb|EED95005.1| hypothetical protein THAPSDRAFT_39726 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 378.252 bits (970), Expect = 2.976e-128
Identity = 176/285 (61.75%), Postives = 224/285 (78.60%), Query Frame = 0
Query:    2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEE 286
            +GKA+FEM+DY  A++AL  MQ+ +P+R+ GLD+LSTALWHLK EV+L  LAQK ++ +R +PEAW VVGNC S QKE ETA+ FF R+I +DP++ YA+T+CGHEY+ N D +KA++CYR A+R+D RHYNAWYGLG IYFRQEK++LAEYHF RAL IN  SSVLH +LGM  H NGK+ +AL+ LA A  + P NPQA +QRA + M LDR  EA  ELE+VR  APREASVH+ +GK+ KRLG+ EKA+R FL ALD DPKD NL+KAA+D+L+ P+  EE
Sbjct:   69 IGKAYFEMSDYQNAERALGKMQRAEPHRMKGLDILSTALWHLKKEVELSDLAQKAVDFDRMSPEAWFVVGNCFSFQKEQETAITFFHRSIQLDPTYTYAHTMCGHEYMSNEDFEKAISCYRDAIRVDCRHYNAWYGLGAIYFRQEKFDLAEYHFQRALDINRQSSVLHCHLGMAQHHNGKTFEALDTLAGAFLLDPRNPQAHYQRATIFMSLDRPDEALAELEKVRSAAPREASVHYNMGKVLKRLGRPEKAMRCFLTALDLDPKDNNLIKAAMDRLDEPDVEEE 353          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|1072236427|gb|OEU21155.1| (TPR-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 372.474 bits (955), Expect = 3.172e-126
Identity = 177/286 (61.89%), Postives = 224/286 (78.32%), Query Frame = 0
Query:    3 GKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEE 288
            G+A+FEMA+Y  AQ+ LE MQ V+P+R+ GLDLLST LW LK EV+L  LAQ+ ++ +R APEAWCVVGNC SLQKEHETAL FF R++ +DPSF Y +TL G+EY+ N D DKA+AC+R  +RLD+RHYNAWYG+G IY RQEKY+LAEYHF RA+ IN  SSVL   LGM  ++NGK ++ALN LA A  + P NPQARFQRA + + L+R +EA +ELE+VRD APREA+VHF +GK+ KRLG+ E+A+R FL ALD DPKD  L+K+A+D+LE P+  EE E
Sbjct:   55 GRAYFEMAEYQNAQRCLELMQGVEPHRMKGLDLLSTVLWQLKKEVELAHLAQRTVDFDRLAPEAWCVVGNCFSLQKEHETALVFFGRSLQLDPSFTYTHTLSGYEYMANEDFDKAMACFRNGIRLDERHYNAWYGMGAIYHRQEKYDLAEYHFQRAVQINPQSSVLRCNLGMSQYSNGKPVEALNTLAEAFRLDPHNPQARFQRATIYIALNRPEEALKELEKVRDAAPREATVHFAMGKVLKRLGRPEQAMRCFLTALDLDPKDNQLIKSAMDKLEEPDVLEEAE 340          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|567980812|gb|ETL31262.1| (hypothetical protein L916_15857 [Phytophthora parasitica])

HSP 1 Score: 370.548 bits (950), Expect = 1.017e-123
Identity = 171/286 (59.79%), Postives = 222/286 (77.62%), Query Frame = 0
Query:    2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287
            +G+A FEMADY RAQ+    +++ +P+R+ GLDL ST LWHLK EV+L +LAQ+  + ++ + EAWC+ GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN  SS+LH +LGMV HA  +  +AL  L  A+ +QP NPQARFQRANVL+ L RY+EA EEL  V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++  P+  +++
Sbjct:  176 IGRAHFEMADYVRAQEVFCALRRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCIAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 461          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|567952148|gb|ETK77829.1| (hypothetical protein L915_15961 [Phytophthora parasitica])

HSP 1 Score: 370.548 bits (950), Expect = 1.050e-123
Identity = 171/286 (59.79%), Postives = 222/286 (77.62%), Query Frame = 0
Query:    2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287
            +G+A FEMADY RAQ+    +++ +P+R+ GLDL ST LWHLK EV+L +LAQ+  + ++ + EAWC+ GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN  SS+LH +LGMV HA  +  +AL  L  A+ +QP NPQARFQRANVL+ L RY+EA EEL  V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++  P+  +++
Sbjct:  177 IGRAHFEMADYVRAQEVFCALRRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCIAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 462          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|970659515|gb|KUF97147.1| (Microsomal glutathione S-transferase 3 [Phytophthora nicotianae])

HSP 1 Score: 361.688 bits (927), Expect = 8.544e-123
Identity = 167/279 (59.86%), Postives = 216/279 (77.42%), Query Frame = 0
Query:    9 MADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287
            MADY RAQ+    +++ +P+R+ GLDL ST LWHLK EV+L +LAQ+  + ++ + EAWC+ GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN  SS+LH +LGMV HA  +  +AL  L  A+ +QP NPQARFQRANVL+ L RY+EA EEL  V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++  P+  +++
Sbjct:    1 MADYVRAQEVFCALRRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCIAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 279          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|570972864|gb|ETP35642.1| (hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 371.703 bits (953), Expect = 6.206e-122
Identity = 172/286 (60.14%), Postives = 222/286 (77.62%), Query Frame = 0
Query:    2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287
            +G+A+FEMADY RAQ+    + + +P+R+ GLDL ST LWHLK EV+L +LAQ+  + ++ + EAWCV GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN  SS+LH +LGMV HA  +  +AL  L  A+ +QP NPQARFQRANVL+ L RY+EA EEL  V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++  P+  +++
Sbjct:  349 IGRAYFEMADYVRAQEVFCALHRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCVAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 634          
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|675205347|ref|XP_008911558.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568088152|gb|ETN03014.1| hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 370.163 bits (949), Expect = 1.884e-121
Identity = 171/286 (59.79%), Postives = 222/286 (77.62%), Query Frame = 0
Query:    2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287
            +G+A FEMADY RAQ+    +++ +P+R+ GLDL ST LWHLK EV+L +LAQ+  + ++ + EAWC+ GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN  SS+LH +LGMV HA  +  +AL  L  A+ +QP NPQARFQRANVL+ L RY+EA EEL  V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++  P+  +++
Sbjct:  337 IGRAHFEMADYVRAQEVFCALRRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCIAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 622          
The following BLAST results are available for this feature:
BLAST of EWM22855.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103499|gb|EWM22855.1|0.000e+0100.00Tetratricopeptide TPR-1 [Nannochloropsis gaditana][more]
gi|298711117|emb|CBJ32345.1|4.394e-13564.46Putative subunit of the Anaphase Promoting Complex... [more]
gi|676392705|ref|XP_009039630.1|8.150e-13063.21hypothetical protein AURANDRAFT_30520, partial [Au... [more]
gi|223995777|ref|XP_002287562.1|2.976e-12861.75hypothetical protein THAPSDRAFT_39726 [Thalassiosi... [more]
gi|1072236427|gb|OEU21155.1|3.172e-12661.89TPR-like protein [Fragilariopsis cylindrus CCMP110... [more]
gi|567980812|gb|ETL31262.1|1.017e-12359.79hypothetical protein L916_15857 [Phytophthora para... [more]
gi|567952148|gb|ETK77829.1|1.050e-12359.79hypothetical protein L915_15961 [Phytophthora para... [more]
gi|970659515|gb|KUF97147.1|8.544e-12359.86Microsomal glutathione S-transferase 3 [Phytophtho... [more]
gi|570972864|gb|ETP35642.1|6.206e-12260.14hypothetical protein, variant [Phytophthora parasi... [more]
gi|675205347|ref|XP_008911558.1|1.884e-12159.79hypothetical protein, variant [Phytophthora parasi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7842rna7842Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications