EWM22855.1, cds7821 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|585103499|gb|EWM22855.1| (Tetratricopeptide TPR-1 [Nannochloropsis gaditana]) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0 Query: 1 MLGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEEEGEEEAEENF 298 MLGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEEEGEEEAEENF Sbjct: 1 MLGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEEEGEEEAEENF 298
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|298711117|emb|CBJ32345.1| (Putative subunit of the Anaphase Promoting Complex [Ectocarpus siliculosus]) HSP 1 Score: 397.512 bits (1020), Expect = 4.394e-135 Identity = 185/287 (64.46%), Postives = 228/287 (79.44%), Query Frame = 0 Query: 2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEE 288 +G+A+FE ADY A+ ALE MQ+ P+R+ GLDLLST LWHLK +V+L +LAQKV E +RR+P+ WCVVGNC SLQKEHETAL+FFQRAI +D YAYTLCGHEYV N D DKAVAC+R A+R D RHYNAWYGLG+IY RQEKY++AEYHF RAL IN SSVL YLGMV HAN + L+AL+ML AS +P NPQA FQRANVLM ++RY EA ELE VRD+ P+E++V+FL+GK+CK+LG+ + A+RHF +ALD KD NL+KAA+D+L P+ EEE+ Sbjct: 123 VGRAYFERADYGNAKSALESMQRYDPHRMEGLDLLSTTLWHLKRDVELSYLAQKVSEFDRRSPQTWCVVGNCFSLQKEHETALRFFQRAIQLDADMTYAYTLCGHEYVANEDFDKAVACFRMAIRTDRRHYNAWYGLGSIYHRQEKYDMAEYHFRRALKINPQSSVLRVYLGMVLHANKRYLEALDMLELASKSEPRNPQASFQRANVLMSMERYAEALRELEVVRDNVPKESAVYFLMGKVCKKLGQTDAAMRHFTIALDLHNKDKNLIKAAVDRLNDPDMDEEEK 409
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|676392705|ref|XP_009039630.1| (hypothetical protein AURANDRAFT_30520, partial [Aureococcus anophagefferens] >gi|323449907|gb|EGB05792.1| hypothetical protein AURANDRAFT_30520, partial [Aureococcus anophagefferens]) HSP 1 Score: 384.8 bits (987), Expect = 8.150e-130 Identity = 177/280 (63.21%), Postives = 222/280 (79.29%), Query Frame = 0 Query: 2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELP 281 +GK FE ADY A ++L M++V+P+R+AGL+LLSTALWH K +V+LC+LA+ ++ + R+PEAWC GNC+SLQKEH+ A++ FQRAIAVDP F YAYTLCGHEYV N D +KA+ YR+A+R+D+RHYNAWYGLG IY+RQEKYELAEYHF RAL N SSVLH YLGM HAN K AL L RA+ ++P NPQARFQ ANVL+ LD+Y++A EL V DHAPREASVHFL+GK+CK+LG+ + A+ HF ALD +PKD NL+K+AID+LE P Sbjct: 129 VGKVHFEAADYEAAVRSLRTMRRVEPHRMAGLELLSTALWHFKDDVELCYLARHCVDFDARSPEAWCASGNCLSLQKEHDGAIRCFQRAIAVDPRFAYAYTLCGHEYVANEDFEKAIGMYRHAMRIDERHYNAWYGLGAIYYRQEKYELAEYHFDRALCHNPTSSVLHCYLGMTLHANQKCHDALRHLRRAALMEPKNPQARFQCANVLISLDKYEDALAELRAVSDHAPREASVHFLMGKVCKKLGRLDDAMMHFTFALDLEPKDNNLIKSAIDRLEEP 408
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|223995777|ref|XP_002287562.1| (hypothetical protein THAPSDRAFT_39726 [Thalassiosira pseudonana CCMP1335] >gi|220976678|gb|EED95005.1| hypothetical protein THAPSDRAFT_39726 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 378.252 bits (970), Expect = 2.976e-128 Identity = 176/285 (61.75%), Postives = 224/285 (78.60%), Query Frame = 0 Query: 2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEE 286 +GKA+FEM+DY A++AL MQ+ +P+R+ GLD+LSTALWHLK EV+L LAQK ++ +R +PEAW VVGNC S QKE ETA+ FF R+I +DP++ YA+T+CGHEY+ N D +KA++CYR A+R+D RHYNAWYGLG IYFRQEK++LAEYHF RAL IN SSVLH +LGM H NGK+ +AL+ LA A + P NPQA +QRA + M LDR EA ELE+VR APREASVH+ +GK+ KRLG+ EKA+R FL ALD DPKD NL+KAA+D+L+ P+ EE Sbjct: 69 IGKAYFEMSDYQNAERALGKMQRAEPHRMKGLDILSTALWHLKKEVELSDLAQKAVDFDRMSPEAWFVVGNCFSFQKEQETAITFFHRSIQLDPTYTYAHTMCGHEYMSNEDFEKAISCYRDAIRVDCRHYNAWYGLGAIYFRQEKFDLAEYHFQRALDINRQSSVLHCHLGMAQHHNGKTFEALDTLAGAFLLDPRNPQAHYQRATIFMSLDRPDEALAELEKVRSAAPREASVHYNMGKVLKRLGRPEKAMRCFLTALDLDPKDNNLIKAAMDRLDEPDVEEE 353
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|1072236427|gb|OEU21155.1| (TPR-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 372.474 bits (955), Expect = 3.172e-126 Identity = 177/286 (61.89%), Postives = 224/286 (78.32%), Query Frame = 0 Query: 3 GKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEEE 288 G+A+FEMA+Y AQ+ LE MQ V+P+R+ GLDLLST LW LK EV+L LAQ+ ++ +R APEAWCVVGNC SLQKEHETAL FF R++ +DPSF Y +TL G+EY+ N D DKA+AC+R +RLD+RHYNAWYG+G IY RQEKY+LAEYHF RA+ IN SSVL LGM ++NGK ++ALN LA A + P NPQARFQRA + + L+R +EA +ELE+VRD APREA+VHF +GK+ KRLG+ E+A+R FL ALD DPKD L+K+A+D+LE P+ EE E Sbjct: 55 GRAYFEMAEYQNAQRCLELMQGVEPHRMKGLDLLSTVLWQLKKEVELAHLAQRTVDFDRLAPEAWCVVGNCFSLQKEHETALVFFGRSLQLDPSFTYTHTLSGYEYMANEDFDKAMACFRNGIRLDERHYNAWYGMGAIYHRQEKYDLAEYHFQRAVQINPQSSVLRCNLGMSQYSNGKPVEALNTLAEAFRLDPHNPQARFQRATIYIALNRPEEALKELEKVRDAAPREATVHFAMGKVLKRLGRPEQAMRCFLTALDLDPKDNQLIKSAMDKLEEPDVLEEAE 340
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|567980812|gb|ETL31262.1| (hypothetical protein L916_15857 [Phytophthora parasitica]) HSP 1 Score: 370.548 bits (950), Expect = 1.017e-123 Identity = 171/286 (59.79%), Postives = 222/286 (77.62%), Query Frame = 0 Query: 2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287 +G+A FEMADY RAQ+ +++ +P+R+ GLDL ST LWHLK EV+L +LAQ+ + ++ + EAWC+ GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN SS+LH +LGMV HA + +AL L A+ +QP NPQARFQRANVL+ L RY+EA EEL V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++ P+ +++ Sbjct: 176 IGRAHFEMADYVRAQEVFCALRRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCIAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 461
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|567952148|gb|ETK77829.1| (hypothetical protein L915_15961 [Phytophthora parasitica]) HSP 1 Score: 370.548 bits (950), Expect = 1.050e-123 Identity = 171/286 (59.79%), Postives = 222/286 (77.62%), Query Frame = 0 Query: 2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287 +G+A FEMADY RAQ+ +++ +P+R+ GLDL ST LWHLK EV+L +LAQ+ + ++ + EAWC+ GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN SS+LH +LGMV HA + +AL L A+ +QP NPQARFQRANVL+ L RY+EA EEL V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++ P+ +++ Sbjct: 177 IGRAHFEMADYVRAQEVFCALRRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCIAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 462
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|970659515|gb|KUF97147.1| (Microsomal glutathione S-transferase 3 [Phytophthora nicotianae]) HSP 1 Score: 361.688 bits (927), Expect = 8.544e-123 Identity = 167/279 (59.86%), Postives = 216/279 (77.42%), Query Frame = 0 Query: 9 MADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287 MADY RAQ+ +++ +P+R+ GLDL ST LWHLK EV+L +LAQ+ + ++ + EAWC+ GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN SS+LH +LGMV HA + +AL L A+ +QP NPQARFQRANVL+ L RY+EA EEL V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++ P+ +++ Sbjct: 1 MADYVRAQEVFCALRRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCIAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 279
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|570972864|gb|ETP35642.1| (hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 371.703 bits (953), Expect = 6.206e-122 Identity = 172/286 (60.14%), Postives = 222/286 (77.62%), Query Frame = 0 Query: 2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287 +G+A+FEMADY RAQ+ + + +P+R+ GLDL ST LWHLK EV+L +LAQ+ + ++ + EAWCV GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN SS+LH +LGMV HA + +AL L A+ +QP NPQARFQRANVL+ L RY+EA EEL V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++ P+ +++ Sbjct: 349 IGRAYFEMADYVRAQEVFCALHRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCVAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 634
BLAST of EWM22855.1 vs. NCBI_GenBank
Match: gi|675205347|ref|XP_008911558.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568088152|gb|ETN03014.1| hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 370.163 bits (949), Expect = 1.884e-121 Identity = 171/286 (59.79%), Postives = 222/286 (77.62%), Query Frame = 0 Query: 2 LGKAFFEMADYPRAQKALEDMQQVQPYRLAGLDLLSTALWHLKAEVDLCFLAQKVLEQNRRAPEAWCVVGNCMSLQKEHETALKFFQRAIAVDPSFVYAYTLCGHEYVCNGDLDKAVACYRYALRLDDRHYNAWYGLGTIYFRQEKYELAEYHFSRALSINTASSVLHTYLGMVFHANGKSLQALNMLARASAIQPDNPQARFQRANVLMKLDRYQEAQEELERVRDHAPREASVHFLLGKICKRLGKREKALRHFLLALDFDPKDGNLVKAAIDQLELPEEAEEE 287 +G+A FEMADY RAQ+ +++ +P+R+ GLDL ST LWHLK EV+L +LAQ+ + ++ + EAWC+ GNC SLQKEH+TAL FFQRAI +DPSF YAYTL GHEYV N D +KAV CYR+A+R D RHYNAWYGLGTIY+RQEK+E AEYHF RAL IN SS+LH +LGMV HA + +AL L A+ +QP NPQARFQRANVL+ L RY+EA EEL V++ APRE+SVHF++GK+ K+LG+ E+A+++F LAL F PKD N +K AID++ P+ +++ Sbjct: 337 IGRAHFEMADYVRAQEVFCALRRAEPHRMEGLDLYSTTLWHLKKEVELSYLAQQATDFDKLSCEAWCIAGNCFSLQKEHDTALAFFQRAIQLDPSFTYAYTLSGHEYVANEDFEKAVNCYRHAIRTDSRHYNAWYGLGTIYYRQEKFEFAEYHFKRALEINPRSSLLHCFLGMVLHATHRYDEALATLVVAAELQPLNPQARFQRANVLITLQRYEEALEELHVVKNFAPRESSVHFMMGKVAKKLGRIEEAMKYFTLALHFHPKDNNQIKVAIDKINEPDHDDDD 622 The following BLAST results are available for this feature:
BLAST of EWM22855.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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