EWM22863.1, cds7806 (CDS) Nannochloropsis gaditana

Overview
NameEWM22863.1
Unique Namecds7806
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:63366..63575 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22863.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100341g1.8449.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:63366..63575 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM22863.1 vs. NCBI_GenBank
Match: gi|585103510|gb|EWM22863.1| (hypothetical protein Naga_100341g1 [Nannochloropsis gaditana])

HSP 1 Score: 139.813 bits (351), Expect = 5.035e-42
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 
Query:    1 MPPTKLLQKSASSLRWVILLAASLLMLSNYFVYDIPASLKDLIRQNMGLDKSEFEVRRKKKGVGRNISP 69
            MPPTKLLQKSASSLRWVILLAASLLMLSNYFVYDIPASLKDLIRQNMGLDKSEFEVRRKKKGVGRNISP
Sbjct:    1 MPPTKLLQKSASSLRWVILLAASLLMLSNYFVYDIPASLKDLIRQNMGLDKSEFEVRRKKKGVGRNISP 69
The following BLAST results are available for this feature:
BLAST of EWM22863.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103510|gb|EWM22863.1|5.035e-42100.00hypothetical protein Naga_100341g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7827rna7827Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications