EWM22881.1, cds7791 (CDS) Nannochloropsis gaditana

Overview
NameEWM22881.1
Unique Namecds7791
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:38002..38364 -
Alignment locationCM002474.1:35414..37801 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22881.1
Productatp-dependent rna helicase
Orig transcript idgnl|cribi|Naga_100788g2.10000.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:38002..38364 -
CM002474.1supercontigCM002474.1:35414..37801 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR000629RNA-helicase_DEAD-box_CS
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
Homology
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|585103538|gb|EWM22881.1| (atp-dependent rna helicase [Nannochloropsis gaditana])

HSP 1 Score: 1824.29 bits (4724), Expect = 0.000e+0
Identity = 916/916 (100.00%), Postives = 916/916 (100.00%), Query Frame = 0
Query:    1 MLLILFWFMSTGFWTSDVGTNLLLKGVQLVRNSSLDMFAIERYEATEALENRQDGQAEKNDKLAQYLARVRSRHGLKKEKKSQKRPRVAEEGVGQPTDVRAPSMESSGLERKKKKEDRGTERCERTTQGTQAKARHPADPPPLPSASPAFLPFPTSGTPSSLPASSPPSLDPPSRATPGLDSVRRLLSGHMHKATRSRPLPFPPVASGGTEIGRSEGAKMEEQSILASHTAPGKASLPPSKTSAQDIDGSAHRPQARGPQGPTTQPATFPTSLRPSLPSSLPMADAWKRWGLDTRLLPILASRGMSTLLPVQAQVLPHLLPPLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRGVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMNEGLVRQMLRMDAGLGGNAAGQGKEGEEAGEEEEEEEGEENEEGEEEEEEEEEGEGAT 916
            MLLILFWFMSTGFWTSDVGTNLLLKGVQLVRNSSLDMFAIERYEATEALENRQDGQAEKNDKLAQYLARVRSRHGLKKEKKSQKRPRVAEEGVGQPTDVRAPSMESSGLERKKKKEDRGTERCERTTQGTQAKARHPADPPPLPSASPAFLPFPTSGTPSSLPASSPPSLDPPSRATPGLDSVRRLLSGHMHKATRSRPLPFPPVASGGTEIGRSEGAKMEEQSILASHTAPGKASLPPSKTSAQDIDGSAHRPQARGPQGPTTQPATFPTSLRPSLPSSLPMADAWKRWGLDTRLLPILASRGMSTLLPVQAQVLPHLLPPLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRGVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMNEGLVRQMLRMDAGLGGNAAGQGKEGEEAGEEEEEEEGEENEEGEEEEEEEEEGEGAT
Sbjct:    1 MLLILFWFMSTGFWTSDVGTNLLLKGVQLVRNSSLDMFAIERYEATEALENRQDGQAEKNDKLAQYLARVRSRHGLKKEKKSQKRPRVAEEGVGQPTDVRAPSMESSGLERKKKKEDRGTERCERTTQGTQAKARHPADPPPLPSASPAFLPFPTSGTPSSLPASSPPSLDPPSRATPGLDSVRRLLSGHMHKATRSRPLPFPPVASGGTEIGRSEGAKMEEQSILASHTAPGKASLPPSKTSAQDIDGSAHRPQARGPQGPTTQPATFPTSLRPSLPSSLPMADAWKRWGLDTRLLPILASRGMSTLLPVQAQVLPHLLPPLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRGVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMNEGLVRQMLRMDAGLGGNAAGQGKEGEEAGEEEEEEEGEENEEGEEEEEEEEEGEGAT 916          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|1072236349|gb|OEU21077.1| (DEAD-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 305.064 bits (780), Expect = 2.444e-89
Identity = 226/599 (37.73%), Postives = 322/599 (53.76%), Query Frame = 0
Query:  281 LPMADAWKRWGLDTRLLPILASRGMSTLLPVQAQVLPHLLPPLLPPARL--LPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTL--APTVGVKVGLAVGQSDFQAEQQR-VMGWEG-GGKEGGR--------GVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGH-------ILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPP--ASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLK-RGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTT 855
            LP+A+A +RWG+   L+  L S G     P+QA  +P     ++    +  L  RD    APTGSGKTL +VL +L+ LA+RRV RLR LV++PSRDLA QV+  F          +++GLA+GQ++F+AEQ++ ++G +   G +  R         VDVLV TPGRL+DHL+ TPGFTL HLR LV+DEADRLL+QSY GW  R+   +++P       P  +  S   S+          D + S  T            SS   S +   + L KLL+SAT+T +PQKL+ L L  P+YF+ H         + D      + G+  E  +   +P  L+E  V CT++ KP++LLALLL  L+ +  S    P       +++VFTSSL++THRL+RLLQL  A       ++  PP                   EFSS+L+Q QR+ L++RC                  +  V VL+ SDGM+RG+DL +V AVI+YD P    TY+HR GRTARAG++G +   LK +GQ  +F +LRR +       E    T+ K   +   +P Y++ +  LKEV+  E    LK+T
Sbjct:    4 LPIAEAARRWGMAEFLVRNLQSNGHEHFFPIQALTIP---DAIIAERHMTSLRIRDVCCAAPTGSGKTLAFVLPVLNALASRRVRRLRALVILPSRDLAQQVYGVFDAYRKGSRNDLRIGLAIGQTEFRAEQKKLILGDDADSGADNKRKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDCVHAP-------PTQSMDSKDNST----------DKIYSDGT------------SSESPSDICQRVQLRKLLYSATLTKDPQKLSSLRLINPKYFNAHDLKRRSSTGVNDSRDIGNMNGNNLENSLYR-MPEQLKECTVECTAEQKPIVLLALLLERLKEYEESSISSPNRKKKKNIIVVFTSSLEATHRLTRLLQLLFAA-----GNYGTPPV------------------EFSSNLNQNQRSMLMKRC--------------NDENDRSVSVLICSDGMSRGMDLASVVAVIHYDVPGMAKTYVHRCGRTARAGQDGTAIAILKGKGQAGQFAKLRRLIA----LPERVTKTSVKTSLVRCVIPLYRQCVSCLKEVLAAEDRNELKST 528          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|1173943608|gb|OQR92439.1| (DEAD/DEAH box RNA helicase [Achlya hypogyna])

HSP 1 Score: 298.13 bits (762), Expect = 2.719e-87
Identity = 203/587 (34.58%), Postives = 293/587 (49.91%), Query Frame = 0
Query:  284 ADAWKR--WGLDT--RLLPILASRGMSTLLPVQAQVLPHLLPPLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRGVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKL-------GPLEPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMN 859
            A+ W +  +GLD    L   L + G+ +  P+Q   +P +L            +D  + APTGSGKT++Y L ++ +L NR   RLR +++VPSRDL  QV +    L     + VG A+GQ +F +EQ+ +   +G        VD+LVATPGRL+DHLE+TPGFTL H++ +V+DEADRLLNQSYQ W ++++++IY                           ++LE++ G +  L P T R      +   +  R  +PL ++L SAT+T NP+KLA + +      +V         +  L    D        P+ L E +V C +  KPL+LL LL               A G  L +VF SS+++THRL RLLQL  A    PE+                       V E+SS+L+Q QR+ L+Q C                   G ++V+V SD MARG+D+ +V  V+NYD P  + TYIHRVGRTARAGR GR+ T +K+GQ K            G  R +G+     L         ++  +P Y +AL  LKE +  EK G L  T G++
Sbjct:    7 AEHWSKTEYGLDLDPTLCANLEATGIHSFFPIQHITIPKILATGYT-------KDLCINAPTGSGKTMVYCLPIVQRLVNRVFRRLRAVIIVPSRDLVVQVKKVLDGLVRNTPLTVGAAMGQVNFTSEQRLLTDAKGNSL-----VDILVATPGRLVDHLEQTPGFTLQHVQFVVVDEADRLLNQSYQDWITKLYNSIYVTE------------------------SSLENLHGGA--LHPATIR-----RADGKNPHRIRIPLIRILLSATLTRNPRKLAAIGMPHAELVTV---------NEELNVASDAKLNLFSTPANLEEGMVECEAAEKPLVLLELL--------------HAWGDQLTIVFASSINATHRLCRLLQLYAAN---PES-----------------------VREYSSTLNQKQRSQLVQAC-----------------HRGTIKVVVCSDAMARGMDIAHVENVVNYDVPPYIKTYIHRVGRTARAGRAGRAVTLVKKGQTK------------GLARMLGKANKAALPEYPVDSAHMQTLVPRYTEALASLKETLAKEKAGHLGLTTGVS 472          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|669149648|ref|XP_008610386.1| (hypothetical protein SDRG_06385 [Saprolegnia diclina VS20] >gi|530738038|gb|EQC36280.1| hypothetical protein SDRG_06385 [Saprolegnia diclina VS20])

HSP 1 Score: 293.123 bits (749), Expect = 3.380e-85
Identity = 199/577 (34.49%), Postives = 289/577 (50.09%), Query Frame = 0
Query:  287 WKR--WGLDT--RLLPILASRGMSTLLPVQAQVLPHLLPPLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRGVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMN 859
            W +  +GLD    L   L + G+ +  P+Q   +P +L            +D  + APTGSGKT++Y L ++ +L NR   RLR +V+VPSRDL  QV +    L     + VG+A+GQS+F AEQ+ +   +G        VD+LVATPGRL+DHLE+TPGFTL H++ +V+DEADRLLNQSYQ W ++++++IY                           ++LE++      L P T R P   +  P    R  +PL ++L SAT+T NP+KLA + +      +V         +  L    D        P+ L E +V C +  KPL+LL LL     +F          G  L ++FTSS+++THRL RLLQL       PE+                       V E+SS+L+Q QR+ L+Q C                   G ++++V SD MARG+D+ +V  V+NYD P  + TYIHRVGRTARAGR GR+ T +K+GQ K   R+          +    +    +  ++  +P Y   L  LKE +  EK G L  T  ++
Sbjct:   14 WSKTEYGLDLDPTLCKNLEATGIHSFFPIQHITIPKILATGYT-------KDLCINAPTGSGKTMVYCLPIVQRLVNRVFRRLRAVVIVPSRDLVVQVKKVLDGLVLGTPLTVGVAMGQSNFTAEQRTLTDAKGNSL-----VDILVATPGRLVDHLEQTPGFTLQHVQFVVVDEADRLLNQSYQDWITKLYNSIYVTE------------------------SSLENL-NRGTALHPATIRRPDGKN--PH---RIRIPLIRILLSATLTRNPRKLAAIGMPHAELVTV---------NEELNVASDSKVNLFATPANLEEGMVECEAAEKPLVLLELL----HSF----------GDQLTIIFTSSINATHRLCRLLQLYATN---PES-----------------------VREYSSTLNQKQRSQLVQAC-----------------HRGTIKIVVCSDAMARGMDIAHVENVVNYDVPPYIKTYIHRVGRTARAGRAGRAVTLVKKGQTKGLARML-----AKAEKAPLPVYPVDMEHMQTLVPRYTDCLASLKETLAKEKAGHLGLTTSVS 477          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|1183489387|gb|ORZ13085.1| (P-loop containing nucleoside triphosphate hydrolase protein [Absidia repens])

HSP 1 Score: 291.582 bits (745), Expect = 1.579e-84
Identity = 208/579 (35.92%), Postives = 287/579 (49.57%), Query Frame = 0
Query:  270 PTSLRPSLPSSLPMADAWKRWGLDTRLLPILASRGMSTLLPVQAQVLPHLLP-PLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRG-VDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASS---LPSSSLRPPLP--LSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSI-VGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGL 840
            PT++ P    SL         GL + L+     +G+S+   VQ QV+P  L    L   R  P  D  + APTGSGKTL YVL ++  L+ R V RLR LV++P+RDL  QV   F        +KVG+A+GQ  F  EQ  ++G       GG   VD+L+ATPGRL+DHL+ TP FTL HLR LV+DEAD+LLNQSYQ W + I HA             S PP+    S+         D     Y++  +    P   SS   LP+S +  P    + KLLFSAT+T NP K+A LHL+ P Y SV             G D ++P   +  P+ L+E ++ C S  KPL ++ LL            +   SG    L FT S++ST +L  LL           N +                TG  + V E+SS L   QR ALLQ+                  KEG + +++ SD + RGID+  V  VI+YD P  +  YIHRVGRTARAGREG++FT +++ + + F  + R+    G +++V      K   ++ +  GY+ AL  L
Sbjct:   65 PTTVEPDQSCSL------NDVGLSSSLIQRCQDQGLSSFFAVQMQVIPAFLRRKALYDTRRAP-GDLCISAPTGSGKTLAYVLPIVDILSKRIVTRLRALVILPTRDLVIQVKETFDAFVKGTDLKVGIALGQHSFIQEQISLVGKSNEKYNGGHSKVDILIATPGRLMDHLKDTPNFTLQHLRFLVIDEADKLLNQSYQDWLNHILHA-------------SQPPTSKNKSTL--------DFKTDKYSVVESDGVAPSFMSSCFDLPTSDIDLPKAPSVQKLLFSATLTKNPGKIAGLHLTDPEYISVQRQ----------GDDTNQPQYTT--PAGLKEFMMVCASDKKPLTVIYLL----------KQLNIKSG----LCFTKSVESTRQLKMLL-----------NGYG-------------KQTGMKLNVVEYSSDLKSSQRKALLQQF-----------------KEGEIDLMICSDLIGRGIDMDCVEVVISYDVPLFMDKYIHRVGRTARAGREGKAFTLVEKQEARHFNGMLRS---AGHYQQVKTFAVDK-EQMKSYEEGYQAALAEL 544          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|813164314|ref|XP_012203217.1| (hypothetical protein SPRG_20609 [Saprolegnia parasitica CBS 223.65] >gi|641532084|gb|KDO26127.1| hypothetical protein SPRG_20609 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 291.582 bits (745), Expect = 2.703e-84
Identity = 202/588 (34.35%), Postives = 291/588 (49.49%), Query Frame = 0
Query:  287 WKR--WGLDT--RLLPILASRGMSTLLPVQAQVLPHLLPPLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRGVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVG-SGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPL----------EPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMN 859
            W +  +GLD    L   L + G+ +  P+Q   +P +L            +D  + APTGSGKT++Y L ++ +L NR   RLR +V+VPSRDL  QV +    L     + VG+A+GQS+F AEQ+ +   +G        VD+LVATPGRL+DHLE+TPGFTL H++ +V+DEADRLLNQSYQ W ++++++IY                           ++LE++      L P T R P   +  P    R  +PL ++L SAT+T NP+KLA + +      +V+  +              E  V     P+ L E +V C +  KPL+LL LL     +F          G  L ++FTSS+++THRL RLLQL       PE+                       V E+SS+L+Q QR+ L+Q C                   G ++++V SD MARG+D+ +V  V+NYD P  + TYIHRVGRTARAGR GR+ T +K+GQ K   R+               +   +  PL          +  +P Y   L  LKE +  EK G L  T G++
Sbjct:    9 WSKTEYGLDLDPTLCKNLEASGIHSFFPIQHITIPKILATGYT-------KDLCINAPTGSGKTMVYCLPIVQRLVNRVFRRLRAVVIVPSRDLVVQVKKVLDGLVLGTPLTVGVAMGQSNFTAEQRTLTDAKGNSL-----VDILVATPGRLVDHLEQTPGFTLQHVQFVVVDEADRLLNQSYQDWITKLYNSIYVTE------------------------SSLENL-NRGTALHPATIRRPDGKN--PH---RIRIPLIRILLSATLTRNPRKLAAIGMPHAELVTVNEEL----------NVASESKVNLFATPANLEEGMVECEAAEKPLVLLELL----HSF----------GDQLTIIFTSSINATHRLCRLLQLYATN---PES-----------------------VREYSSTLNQKQRSQLVQAC-----------------HRGTIKIVVCSDAMARGMDIAHVENVVNYDVPPYIKTYIHRVGRTARAGRAGRAVTLVKKGQTKGLSRM---------------LAKAEKAPLPVYPVDAEHMQTLVPRYTVCLASLKETLAKEKAGHLGLTTGIS 472          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|673031452|ref|XP_008869687.1| (hypothetical protein H310_06410 [Aphanomyces invadans] >gi|574474838|gb|ETW01839.1| hypothetical protein H310_06410 [Aphanomyces invadans])

HSP 1 Score: 289.271 bits (739), Expect = 4.233e-84
Identity = 202/556 (36.33%), Postives = 283/556 (50.90%), Query Frame = 0
Query:  300 LASRGMSTLLPVQAQVLPHLLPPLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRGVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTT 855
            LA+ G+ +  P+Q   +P +L            +D  + APTGSGKT++YVL ++ +L +R V RLR +V+VPSRDL  QV + F  L     +  G+A+GQS+F  EQQ ++G      +G   VD+LVATPGRL+DH+E+TP FTL H++ +V+DEADRLLNQSYQ W ++++H+IY       +L   A   P                     T+R    + P           R  +PL ++L SAT+T NP+KLA + +      +V+  + D                    P+ L E ++ C S  KPL+LL L    L  F S           L +VFTSS+++THRL RLLQL +                      S P +    V E+SS L+Q QR+ L+Q+C                 K G ++V+V SD MARG+D+ +VS VINYD P  + TYIHRVGRTARAGR GR+ T +KRGQ K   R+        K  E+    A  +  ++  +P Y   L  LKE +  EK G L  T
Sbjct:   38 LATCGIHSFFPIQHVTIPKILATGYT-------KDLCINAPTGSGKTMVYVLPIVQRLVSRVVRRLRAVVVVPSRDLVVQVKKVFDALIAGTPLTCGVAMGQSNFSTEQQHLIG-----PDGLSLVDILVATPGRLVDHIEQTPHFTLQHVQFVVVDEADRLLNQSYQDWITKLYHSIYVTETSVENLVAGASLHPS--------------------TIRRADGKNPH----------RIRIPLIRILLSATLTRNPRKLAAIGMPHAELITVNDALDDNL---------------FATPANLDESMIECDSTEKPLVLLEL----LHTFESQ----------LTIVFTSSINATHRLCRLLQLFS----------------------SEPQS----VREYSSGLTQKQRSQLVQQC-----------------KNGAIKVVVCSDAMARGMDIAHVSNVINYDVPPYLKTYIHRVGRTARAGRAGRAITLVKRGQTKGLSRMLA----KAKKSELQSY-AYDINHMKTLVPRYTACLASLKETLAKEKAGHLAIT 474          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|827762520|gb|KLO17125.1| (DEAD-domain-containing protein [Schizopora paradoxa])

HSP 1 Score: 286.96 bits (733), Expect = 2.079e-82
Identity = 230/674 (34.12%), Postives = 318/674 (47.18%), Query Frame = 0
Query:  216 EGAKMEEQSILASHTAP---GKASLPPSKTSAQDIDGSAHRPQARGPQGPTTQPATFPTSLRPSLPSSLPMADAWKRWGLDTRLL-----------------------PILASR--------GMSTLLPVQAQVLPHLLPP------LLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRG-VDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSG--LPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGE-FSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMG 845
            E    EEQ ++ +        K  L    TS++D    + +  +R P  P T P +FP  + P  PS   +A      GLD  LL                       PIL+ +        G+S L  VQ  +LP LLPP      L  P    P RD    APTGSGKTL YV+ ++  L+ R   RLR L+++P+RDL  QV   F+ ++   G+K+G+A GQ  F  EQ +++  +     GG   VD+L+ TPGRLIDHL  TP F+L HLR LV+DEADRLL QS+Q W S++  AI          PP+  P P   SS     A   D +  S+     T    F     PS          KLLFSAT+T +P K+A L L  P+YF V             GGD D   V     +P TL+E +  C++  KP++L  LL               A      LVFT S +ST RL RL +   A+    + +                + G S+  + +SS LS  +R A+L                 E  K   + +LV SD ++RGID+ +VS V++YD P  +  Y+HRVGRTARAGREG ++T ++  + + F+ + R      K  ++ +IT   L PL   LP Y+ ALR LKE+ G
Sbjct:    4 EDVDEEEQPVVETEKEARPKKKRKLDEDSTSSEDEREESPKLPSRSPPPPATLP-SFPLPVAPKAPSKATLA----LQGLDKALLSAELIDPSLTLSLDALERPPNEVPILSEKMKKRLTELGISELFAVQTALLPFLLPPQKRHRALYMPYD--PPRDVCASAPTGSGKTLAYVVPIVEILSARIATRLRALIVLPTRDLVMQVQETFEAVSKGRGLKIGVATGQHSFAHEQGQLVADQVTKLHGGSSKVDILICTPGRLIDHLNGTPNFSLQHLRFLVVDEADRLLAQSFQDWLSQVLTAIR---------PPTTKPIPDSLSSL--TLAPYHDALAPSWIASIPTD---FDDKQEPSC--------QKLLFSATLTRDPSKIAALGLRDPKYFVVQ------------GGDSDGVHVTEKFTMPPTLKEHMAVCSTVQKPVILFQLL--------------QAHNVRNALVFTKSAESTTRLVRLFEFFKASFCAADGN----------------AGGMSVTMQAYSSDLSASERRAIL-----------------EKFKTKEIDILVCSDLISRGIDITHVSHVVSYDAPIDMRKYVHRVGRTARAGREGDAWTLIEDQEARHFKMMMREADHLNKLAKL-KITEADLQPL---LPHYENALRKLKELYG 585          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|698812886|ref|XP_009839472.1| (hypothetical protein H257_13600 [Aphanomyces astaci] >gi|574105703|gb|ETV71226.1| hypothetical protein H257_13600 [Aphanomyces astaci])

HSP 1 Score: 281.182 bits (718), Expect = 7.329e-81
Identity = 205/573 (35.78%), Postives = 291/573 (50.79%), Query Frame = 0
Query:  287 WKRWGLDTRLLP----ILASRGMSTLLPVQAQVLPHLLPPLLPPARLLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRGVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTT 855
            W +   D  L P     L   G+ +  P+Q   +P +L            +D  + APTGSGKT++YVL ++ +L +R V RLR +V+VPSRDL  QV + F TL     +  G+A+GQS+F  EQQ ++       +G   VD+LVATPGRL+DHLE+TP FTL H++ +V+DEADRLLNQSYQ W ++++ +IY       +L  +                      G S +L P+T R      +   +  R  +PL ++L SAT+T NP+KLA + +      +V+  + D                    P+ L E ++ C S +KPL+LL LL     AF S           L +VFTSS+++THRL RLLQL + T                  P S        V E+SS L+Q QR+ L+Q+C                 K+G ++V+V SD MARG+D+ +V  VINYD P  + TYIHRVGRTARAGR GR+ T +KRGQ K   R+   +    K      +   +   ++  +P Y   L  LK+ +  EK G L TT
Sbjct:   26 WSKAEYDIDLHPQVRRNLELCGIHSFFPIQHVTIPKILSTGYT-------KDLCINAPTGSGKTMVYVLPIVQRLVSRVVRRLRAVVVVPSRDLVVQVKKVFDTLIAGTPLTCGVAMGQSNFTTEQQHLVS----SVDGLSLVDILVATPGRLVDHLEQTPHFTLQHVQFVVVDEADRLLNQSYQDWITKLYQSIYVTETSVENLTAA----------------------GGSASLHPSTIR-----RADGKNPHRIRIPLIRILLSATLTRNPRKLAAIGMPHAELVTVNDALDDNL---------------FATPANLDESMIECDSMDKPLVLLELL----HAFESQ----------LTIVFTSSINATHRLCRLLQLFSPT------------------PQS--------VREYSSGLTQKQRSQLVQQC-----------------KKGAIKVVVCSDAMARGMDIAHVGNVINYDVPPYLKTYIHRVGRTARAGRAGRAVTLVKRGQVKGLTRM---LSKAKKAELPTYVYDAE--HMKSLVPRYTACLASLKDTLAKEKAGHLATT 483          
BLAST of EWM22881.1 vs. NCBI_GenBank
Match: gi|1139908721|dbj|GAW07789.1| (DEAD-domain-containing protein [Lentinula edodes])

HSP 1 Score: 279.641 bits (714), Expect = 3.559e-79
Identity = 199/574 (34.67%), Postives = 284/574 (49.48%), Query Frame = 0
Query:  291 GLDTRLLPILASRGMSTLLPVQAQVLPHLLPPLLPPARLL-----PCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGRG-VDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTFSLPPSAPPSPPPSSSAWGAAAALEDVVGSSYTLRPTTQRLPFPASSLPSSSLRPPLP-------------LSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPPVGSGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMG 845
            GL  ++   L   G++ L  VQ  +LP LLP   P  R L     P RD  V APTGSGKTL YV+ ++  L++R V RLR LV++P+RDL  QV   F+T++   G+K+G A GQ  F  EQ +++        GG   VD+L+ TPGRLIDHL+ TP F+L HLR LV+DEADRLL QS+Q W  ++             L  + PP  P   +       L+D+  ++ T R  T   P P +  P+     P P               KLLFSAT+T +P K+A L L  P+YF V G      P        D       +P TL+E ++ C++  KPL+   L+               A      LVFT S +ST+RL RLL       +  E S                +  + +V  +SS L   +R A+L +                  K   +++LV SD ++RGID+ +VS VI+YD+P  +  Y+HRVGRTARAGREG ++T ++  + + F+ + +   D     EV R+  G+   L P +P Y+ AL  LK++  
Sbjct:  147 GLSEKMRKRLVDLGITELFAVQTSLLPFLLPSD-PMHRALYQPYNPPRDVCVSAPTGSGKTLAYVVPIVEILSSRIVTRLRALVVLPTRDLVMQVRETFETISKGRGLKIGTATGQHSFPHEQVQLVADHSTSLRGGSSKVDILICTPGRLIDHLKETPNFSLQHLRFLVVDEADRLLAQSFQDWLIQV-------------LAATRPPKNPLKHT-------LKDLADTTLTPRSDTTPNPTPDALAPAFLHLLPYPDVPSFITERKAASCQKLLFSATLTRDPGKIAALELRIPKYFIVQG----SSPDEQEDAILDVVTEKFTMPDTLKEHMIICSAYEKPLVFFHLV--------------HAHDITNALVFTKSAESTNRLVRLLNFFQNA-RTSETS----------------NYKNIVVQAYSSDLPTAERKAVLDKF-----------------KSQEIQILVCSDLISRGIDISHVSHVISYDSPVDMRKYVHRVGRTARAGREGDAWTLVEEQEARHFKLMMK---DAHHLSEVKRLRIGE-KQLAPLIPHYETALSHLKDLYS 643          
The following BLAST results are available for this feature:
BLAST of EWM22881.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103538|gb|EWM22881.1|0.000e+0100.00atp-dependent rna helicase [Nannochloropsis gadita... [more]
gi|1072236349|gb|OEU21077.1|2.444e-8937.73DEAD-domain-containing protein [Fragilariopsis cyl... [more]
gi|1173943608|gb|OQR92439.1|2.719e-8734.58DEAD/DEAH box RNA helicase [Achlya hypogyna][more]
gi|669149648|ref|XP_008610386.1|3.380e-8534.49hypothetical protein SDRG_06385 [Saprolegnia dicli... [more]
gi|1183489387|gb|ORZ13085.1|1.579e-8435.92P-loop containing nucleoside triphosphate hydrolas... [more]
gi|813164314|ref|XP_012203217.1|2.703e-8434.35hypothetical protein SPRG_20609 [Saprolegnia paras... [more]
gi|673031452|ref|XP_008869687.1|4.233e-8436.33hypothetical protein H310_06410 [Aphanomyces invad... [more]
gi|827762520|gb|KLO17125.1|2.079e-8234.12DEAD-domain-containing protein [Schizopora paradox... [more]
gi|698812886|ref|XP_009839472.1|7.329e-8135.78hypothetical protein H257_13600 [Aphanomyces astac... [more]
gi|1139908721|dbj|GAW07789.1|3.559e-7934.67DEAD-domain-containing protein [Lentinula edodes][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7812rna7812Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications