EWM22889.1, cds7789 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|585103547|gb|EWM22889.1| (dna repair helicase rad25, partial [Nannochloropsis gaditana]) HSP 1 Score: 1446.03 bits (3742), Expect = 0.000e+0 Identity = 699/699 (100.00%), Postives = 699/699 (100.00%), Query Frame = 0
Query: 1 MASLDGGWVVDLLPFSVPSPVPRELISTHTWNLGVKYWRGMFSSAGNGTAGVKRPRRTASSASLPSLGKNDGGSNHLPSAYGEEDENVQPFLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
MASLDGGWVVDLLPFSVPSPVPRELISTHTWNLGVKYWRGMFSSAGNGTAGVKRPRRTASSASLPSLGKNDGGSNHLPSAYGEEDENVQPFLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT
Sbjct: 1 MASLDGGWVVDLLPFSVPSPVPRELISTHTWNLGVKYWRGMFSSAGNGTAGVKRPRRTASSASLPSLGKNDGGSNHLPSAYGEEDENVQPFLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|1173944764|gb|OQR93463.1| (TFIIH basal transcription factor complex helicase XPB subunit [Thraustotheca clavata]) HSP 1 Score: 682.174 bits (1759), Expect = 0.000e+0 Identity = 340/615 (55.28%), Postives = 431/615 (70.08%), Query Frame = 0
Query: 91 FLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGD--GDGDFLEGEAAREMSENVEF--LLVGRDEEDGDDLGPEAIHGLAAS--KTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
+ DFS L ++K H S+P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V+I T+ I+ L R SKN+LP ++ F+R T +YGKAKL+L NE+++E+ EV RKLL NE I+ ARV ++ + +G+FL+ E + E N+++ LL+ ED D A AS +T F+I K V +VK A L MD YPLMEEYDFR D + + LK T++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I K + +FTS K + + V+ +TTY+M+A+ G R+ A + I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN +IGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL + + + R +LY+ NPNK EYL+RYHEERGDKII+FSD V+AL YA+ + I+GGT E++R RLL AFR S +VN + LS+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYT
Sbjct: 72 YFDFSSLNMKKDHASRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFIHEYKLTPYSLYAAVSVSIETDSIIKVLDRLSKNQLPECIIKFIRECTTSYGKAKLVLHHNEFYVESLFPEVLRKLLENEQIRLARVKEDTETSTSAAALNMTEFTSNGEFLQKEVSAEDQANLQYQKLLM----EDYDQTTDNAAKATTASTVQTVSFRIRKTHVEQVKRACLDMD--YPLMEEYDFRNDKTIPDIEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTNIPSKKIARFTSVSKDEIDKDSGVI-VTTYTMVAFGGARSSASAEAMKIIQGREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGPFYSEYL------KDNNTARQRALLYVANPNKFSAAEYLIRYHEERGDKIILFSDDVFALQLYAKKLQKGYIFGGTSENERMRLLQAFRSSPQVNVVCLSKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANASGGFNAFFYT 673
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|669158796|ref|XP_008614960.1| (DNA excision repair protein ERCC-3 [Saprolegnia diclina VS20] >gi|530733319|gb|EQC31561.1| DNA excision repair protein ERCC-3 [Saprolegnia diclina VS20]) HSP 1 Score: 680.248 bits (1754), Expect = 0.000e+0 Identity = 337/611 (55.16%), Postives = 427/611 (69.89%), Query Frame = 0
Query: 91 FLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGD--GDGDFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
+ DFS L L+K HES+P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP +VHEYKLT YSLYAAV+V+I T+ I+ L R SKN +P+ + +F+R T +YGKAKL+L NE+++E+ +V R LL NE I+ ARV + + +G+FL+ E E N+++ + ++ D G A +T F+I K V +VK A L MD YPLMEEYDFR D + + LK T++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS EK + PE V+ +TTY+M+A+ G R + A ++ I+ REWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN +IGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL E +K R +LY+ NPNK EYL++YHE+RGDKI++FSD V+AL YA G+ IYGGT E +R RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK + GFNAFFYT
Sbjct: 75 YFDFSALELKKDHESRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFVHEYKLTPYSLYAAVSVSIETDSIIKVLERLSKNVIPTGITTFIRDCTLSYGKAKLVLHHNEFYVESLYPQVLRTLLENEQIRLARVKEDPTDASTATAMTSNEFSSNGEFLQKEVTAEDQANMQYQKLLMEDYDQTAEGSAKSTSAATVQTVSFRIRKTHVEQVKRACLDMD--YPLMEEYDFRNDKTIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTTIPEKKIARFTSVEKDYIDPESGVI-VTTYTMVAFGGSRAAKSAAVMALIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEIWCPMTGPFYAEYLK-----ENVSARK-RALLYVANPNKFSAAEYLIQYHEKRGDKILLFSDDVFALRLYATKLGKGFIYGGTGERERMRLLQSFRTSPHVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANSTGGFNAFFYT 676
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|813178006|ref|XP_012205472.1| (hypothetical protein SPRG_11271 [Saprolegnia parasitica CBS 223.65] >gi|641529678|gb|KDO23839.1| hypothetical protein SPRG_11271 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0 Identity = 338/612 (55.23%), Postives = 428/612 (69.93%), Query Frame = 0
Query: 91 FLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV---PLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
+ DFS L L+K HES+P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP +VHEYKLT YSLYAAV+V+I T+ I+ L R SKN +P+ + +F+R T +YGKAKL+L NE+++E+ +V R LL NE I+ ARV P ++ +G+FL+ E E N+++ + ++ D G A +T F+I K V +VK A L MD YPLMEEYDFR D + + LK T++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + I EK + +FTS EK + PE V+ +TTY+M+A+ G R + A ++ I+ REWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN +IGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL E +K R +LY+ NPNK EYL++YHE+RGDKI++FSD V+AL YA G+ IYGGT E +R RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK + GFNAFFYT
Sbjct: 75 YFDFSALELKKDHESRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFVHEYKLTPYSLYAAVSVSIETDSIIKVLERLSKNVIPTGITTFIRDCTLSYGKAKLVLHHNEFYVESLYPQVLRTLLENEQIRLARVKEDPTDTSTATAMTSNEFS-SNGEFLQKEVTAEDQANMQYQKLLMEDYDQTAEGSAKSTSAATVQTVSFRIRKTHVEQVKRACLDMD--YPLMEEYDFRNDKTIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTTIPEKKIARFTSVEKDYIDPESGVI-VTTYTMVAFGGNRAAKSAAVMALIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEIWCPMTGPFYAEYLK-----ENVSARK-RALLYVANPNKFSAAEYLIQYHEKRGDKILLFSDDVFALRLYATKLGKGFIYGGTGERERMRLLQSFRTSPHVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANSTGGFNAFFYT 676
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|223999873|ref|XP_002289609.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220974817|gb|EED93146.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 346/618 (55.99%), Postives = 429/618 (69.42%), Query Frame = 0
Query: 93 DFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV-----PLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQ-TADEG-----FNAFFYT 699
DFS L L+ H S+P W CP+ IYLEAF LY AYDFL+AI EPVARP Y+HEYKLT YSLYAAVA NI TE I+ L RFSKN LP V +F+R T+ YGKAKL+L+ N++++E+E V R+LLR+++I ARV P ++ GGVGG G F+ A EM EN+ D+E+G + L A T FQI E V VK A+ +D YPLMEEYDFR D N +P+ LK T++R YQ++SL MFGNGRARSGIIVLPCGAGKTLTGVTAA TI+K V+ LC VS +QWK QF+ + I ++ + FTS +K + P VLITTY+M++Y G+R+++ A ++N I+ REWGL+++DEVHV PA F+RV+ V AH +LGLTATLVRED+LI LN +IGPKLYEANWMDLT GYLANVQCVE W PMT F EYL D +++++LY+MNP+K+R E+LMR+HEERGDKIIVFSD VY+L YA + R IYG T E +R+ +L FR S + TI +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK T +G FNAFFYT
Sbjct: 1 DFSDLTLKSDHISRPCWTCPDGTIYLEAFHDLYTKAYDFLVAISEPVARPEYLHEYKLTPYSLYAAVATNIETESIVKVLNRFSKNVLPDGVAAFIRECTKRYGKAKLVLKHNKFYVESEHPAVLRELLRDDLISQARVAEDVNPDDATGGVGGTSNADG-----FVVHTKAEEMEENLH------DDEEGGSKSSK----LQAKTTVSFQIKGESVEVVKRRAIDLD--YPLMEEYDFRNDKVNPDVPMDLKPHTRIRRYQERSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAAQTIKKSVVCLCTNAVSVLQWKYQFKLWTNIPDENICVFTSDKKEDINP-GGCVLITTYTMISYGGQRSDKSAEVMNIIRSREWGLLLMDEVHVVPAKMFRRVIGSVKAHCRLGLTATLVREDDLISDLNFLIGPKLYEANWMDLTTQGYLANVQCVEVWTPMTGPFMREYLMA-------DNARLKQLLYVMNPSKLRAAEFLMRFHEERGDKIIVFSDLVYSLKLYAAMLKRPMIYGETSERERQAILGTFRTSDALRTICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKSYTQTDGSNRSSFNAFFYT 593
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|325189336|emb|CCA23856.1| (DNA excision repair crosscomplementing protein similar to human Xeroderma pigmentosum group B DNA repair protein putative [Albugo laibachii Nc14]) HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0 Identity = 338/629 (53.74%), Postives = 433/629 (68.84%), Query Frame = 0
Query: 75 NHLPSAYGEE-DENVQPFLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASK---TAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
N LP + ++ D+ P+ DF++L ++ H S+P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V+I TE +L+ L R SKN LP + F++ T +YGKAKL+L NE+++E+ +V +KLL +E I+ AR+ G G D F+E E E N++F + ++ D +D G AA K T +I K V VK A L +D YPLMEEYDFR D + + LK T++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW +QF+ + I E + +FTS K + P V+ +TTY+M+A+ GKR ++ I+GREWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN +IGPKLYEANWMDLT+ G+LANV CVE WCPMT EF+ EYL E ++ +K R +LY+ NPNK E+L++YHE+RGDKI+VFSD V+AL YA + IYGGT E +R RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYT
Sbjct: 64 NQLPQSKNDQTDDATAPYFDFANLQMKPDHASRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFLHEYKLTPYSLYAAVSVSIETESVLNVLERLSKNNLPPVITQFIQDCTVSYGKAKLVLHHNEFYVESLYPQVLQKLLSHEPIRLARI--RETEGPAAGTKSTTMNDEGFIEKEVMAEDQANLQFQKLLNEDFDAEDEQRITTQGGAAPKTVRTVSVKIRKSMVENVKRACLDLD--YPLMEEYDFRNDKTIPDIEMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTSQFKMWTNIPESKIARFTSVAKDYIDPNSGVI-VTTYTMIAFGGKRARASEEVMQLIQGREWGSLLLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGEFYREYLK-----ENKNARK-RALLYVANPNKFTAAEFLIQYHEKRGDKILVFSDDVFALRLYATKLNKGYIYGGTGERERMRLLQSFRNSPLVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYT 681
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|1173953588|gb|OQS01120.1| (TFIIH basal transcription factor complex helicase XPB subunit [Achlya hypogyna]) HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0 Identity = 337/618 (54.53%), Postives = 426/618 (68.93%), Query Frame = 0
Query: 91 FLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARV---------PLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEFLLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
+ DFS L L+K HES+P+WVCPN RI+LEAFSP+YK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V+I T+ I+ L R SKN +P+ + +F+R T +YGKAKL+L NE+++E+ +V R LL NE I+ ARV P +G+FL+ E E N+++ + ++ D G A A +T F+I K V VK A L MD YPLMEEYDFR D + + LK T++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW QF+ + I EK + +FTS EK + PE V+ +TTY+M+A+ G R + A ++ I+ REWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN +IGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL E +K R +LY+ NPNK EYL++YHE+RGDKI++FSD V+AL YA G+ IYGGT E +R RLL +FR+S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK + GFNAFFYT
Sbjct: 74 YFDFSALELKKDHESRPVWVCPNGRIFLEAFSPIYKQAYDFLVAIAEPVSRPEFLHEYKLTPYSLYAAVSVSIETDSIIKVLERLSKNIIPTCITTFIRDCTLSYGKAKLVLHHNEFYVESLYPQVLRTLLENEQIRLARVKEEPTDTCTPTIFPATATAMTSNEFASNGEFLQKEVTAEDQANMQYQKLLMEDYDQTAEGT-ATKAAATVQTVSFRIRKTHVESVKRACLDMD--YPLMEEYDFRNDKTIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTQQFKMWTTIPEKKIARFTSVEKDYIDPESGVI-VTTYTMVAFGGNRAAKSAAVMALIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGPFYAEYLK-----ENVSARK-RALLYVANPNKFSAAEYLIQYHEKRGDKILLFSDDVFALRLYATKLGKGFIYGGTGERERMRLLQSFRMSPHVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANSTGGFNAFFYT 681
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|698790078|ref|XP_009828071.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574116919|gb|ETV82402.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 336/619 (54.28%), Postives = 429/619 (69.31%), Query Frame = 0
Query: 83 EEDENVQPFLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEF--LLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
E D + DFS L ++ H S+P+WVCPN RI+LEAFSPLYK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V+I TE I+ L R SKN LP +V F++ T +YGKAKL+L NEY++E+ +V ++LL E I+ ARV + +G G + G+FL+ E + E N ++ LL+ ++ D +A +T F+I K V +VK A L +D +PLMEEYDFR D + + LK T++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + +I EK + +FTS K + P V+ +TTY+M+A+ G R + A +++ I+ REWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN +IGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL E +K R +LY+ NPNK EYL++YHE+RGDKI++FSD V+AL YA + IYGGT E +R RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYT
Sbjct: 61 ESDSGNSQYQDFSSLKMKNDHASRPVWVCPNGRIFLEAFSPLYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVSIETESIVKVLERLSKNHLPLVIVQFIKECTASYGKAKLVLHHNEYYVESLYPKVLKRLLEEESIRLARVKEDV---LGAGAASTYNATGEFLQKEISAEDQANKQYEQLLMEDYDQTEDQQRAKAAAAATTVQTVSFRIRKTHVEQVKRACLDID--FPLMEEYDFRNDKSIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTSIPEKKIARFTSVAKDYIDPVSGVI-VTTYTMVAFGGNRAAQSAAVMDIIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGPFYAEYLK-----ENVSARK-RALLYVANPNKFSAAEYLIKYHEDRGDKILLFSDDVFALRLYATKLQKGFIYGGTGERERMRLLQSFRSSPHVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYT 667
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|698790076|ref|XP_009828070.1| (hypothetical protein H257_05051 [Aphanomyces astaci] >gi|574116918|gb|ETV82401.1| hypothetical protein H257_05051 [Aphanomyces astaci]) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 336/619 (54.28%), Postives = 429/619 (69.31%), Query Frame = 0
Query: 83 EEDENVQPFLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEF--LLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
E D + DFS L ++ H S+P+WVCPN RI+LEAFSPLYK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V+I TE I+ L R SKN LP +V F++ T +YGKAKL+L NEY++E+ +V ++LL E I+ ARV + +G G + G+FL+ E + E N ++ LL+ ++ D +A +T F+I K V +VK A L +D +PLMEEYDFR D + + LK T++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + +I EK + +FTS K + P V+ +TTY+M+A+ G R + A +++ I+ REWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN +IGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL E +K R +LY+ NPNK EYL++YHE+RGDKI++FSD V+AL YA + IYGGT E +R RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYT
Sbjct: 61 ESDSGNSQYQDFSSLKMKNDHASRPVWVCPNGRIFLEAFSPLYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVSIETESIVKVLERLSKNHLPLVIVQFIKECTASYGKAKLVLHHNEYYVESLYPKVLKRLLEEESIRLARVKEDV---LGAGAASTYNATGEFLQKEISAEDQANKQYEQLLMEDYDQTEDQQRAKAAAAATTVQTVSFRIRKTHVEQVKRACLDID--FPLMEEYDFRNDKSIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTSIPEKKIARFTSVAKDYIDPVSGVI-VTTYTMVAFGGNRAAQSAAVMDIIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGPFYAEYLK-----ENVSARK-RALLYVANPNKFSAAEYLIKYHEDRGDKILLFSDDVFALRLYATKLQKGFIYGGTGERERMRLLQSFRSSPHVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYT 667
BLAST of EWM22889.1 vs. NCBI_GenBank
Match: gi|673026466|ref|XP_008867194.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574477241|gb|ETW04238.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0 Identity = 335/620 (54.03%), Postives = 429/620 (69.19%), Query Frame = 0
Query: 83 EEDENVQPFLDFSHLVLRKHHESKPLWVCPNLRIYLEAFSPLYKHAYDFLIAICEPVARPTYVHEYKLTSYSLYAAVAVNIHTEHILSTLARFSKNELPSEVVSFVRRSTETYGKAKLLLRDNEYFIEAESKEVARKLLRNEVIKSARVPLNSGGGVGGGGGGGGDGDGDFLEGEAAREMSENVEF---LLVGRDEEDGDDLGPEAIHGLAASKTAIFQIAKEKVRRVKEAALTMDPPYPLMEEYDFRKDAENKALPIMLKSATKVRTYQQKSLRMMFGNGRARSGIIVLPCGAGKTLTGVTAASTIQKGVIILCNTNVSAVQWKAQFRQFAAIEEKYLVKFTSREKTLLPPEEAVVLITTYSMLAYAGKRNEEVAMILNQIKGREWGLMILDEVHVAPASSFQRVLDVVSAHAKLGLTATLVREDNLIDSLNSMIGPKLYEANWMDLTEDGYLANVQCVEAWCPMTREFFEEYLSVPDKYEGRDQKKVREVLYLMNPNKIRVCEYLMRYHEERGDKIIVFSDSVYALSKYAQLFGRDAIYGGTKESDRERLLAAFRISSRVNTIFLSRVGDTSIDLPEANVIIQISSQFGSRRQEAQRLGRILRPKQTADEGFNAFFYT 699
E D + + DFS L ++ H S+P+WVCPN RI+LEAFSPLYK AYDFL+AI EPV+RP ++HEYKLT YSLYAAV+V+I TE I+ L R SKN +P ++ F++ T +YGKAKL+L NEY++E+ V ++LL E I+ ARV + +G G + G+FL+ E + E N ++ L+ D+ + A A +T F+I K +V +VK A L +D +PLMEEYDFR D + + LK T++R YQ+KSL MFGNGRARSGIIVLPCGAGKTLTGVTAASTI+K + LC + VS QW AQF+ + +I EK + +FTS K + P V+ +TTY+M+A+ G R + A +++ I+ REWG ++LDEVHV PA F++V+ ++ H KLGLTATLVRED+LI LN +IGPKLYEANWMDLT+ G+LANV CVE WCPMT F+ EYL E +K R +LY+ NPNK EYL++YHEERGDKI++FSD V+AL YA + IYGGT E +R RLL +FR S VN I +S+VGDTSIDLPEANVIIQ+SS FGSRRQEAQRLGRILRPK A GFNAFFYT
Sbjct: 60 ESDSSNSEYHDFSSLKMKPDHPSRPVWVCPNGRIFLEAFSPLYKQAYDFLVAISEPVSRPEFLHEYKLTPYSLYAAVSVSIETESIVKVLERLSKNHVPQVIIQFIKECTASYGKAKLVLHHNEYYVESLYPNVLKRLLEEESIRRARVKDDL---LGAGASTTYNATGEFLQKEISAEDQANKQYEQLLMEDYDQTEDQQRAKAAATSAATVQTVSFRIRKTQVEQVKRACLDID--FPLMEEYDFRNDKSIPDIDMDLKPTTRIREYQEKSLSKMFGNGRARSGIIVLPCGAGKTLTGVTAASTIKKSCLCLCTSAVSVEQWTAQFKMWTSIPEKKIARFTSVAKDYIDPVSGVI-VTTYTMVAFGGNRAAQSAAVMDIIQSREWGCILLDEVHVVPAKMFRKVIGSIACHCKLGLTATLVREDDLIGDLNFLIGPKLYEANWMDLTQSGFLANVSCVEVWCPMTGPFYAEYLK-----ENVSARK-RALLYVANPNKFSAAEYLIKYHEERGDKILLFSDDVFALRLYATKLQKGFIYGGTGERERMRLLQSFRSSPHVNVICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKANATGGFNAFFYT 667 The following BLAST results are available for this feature:
BLAST of EWM22889.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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