EWM22886.1, cds7788 (CDS) Nannochloropsis gaditana

Overview
NameEWM22886.1
Unique Namecds7788
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:23885..27598 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22886.1
Productuncharacterized protein
Orig transcript idgnl|cribi|Naga_100160g7.4646.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:23885..27598 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005509calcium ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
Homology
BLAST of EWM22886.1 vs. NCBI_GenBank
Match: gi|585103544|gb|EWM22886.1| (uncharacterized protein Naga_100160g7 [Nannochloropsis gaditana])

HSP 1 Score: 2508.41 bits (6500), Expect = 0.000e+0
Identity = 1237/1237 (100.00%), Postives = 1237/1237 (100.00%), Query Frame = 0
Query:    1 MEAIEESLGGELTVERVRREMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQEKRLHSHLRPWREVAAAAIAQQQERQQQPGAFPLTREDVVYMLHAPTRLWEAMDAGRYLAAASTWTTAKDIADKIAEQAASAASTNTSNPALSSGDDSIRDDEEGRMRKWTATQRQVQLVIGNQWACLKDLKSSIISGAHALLADQNVLDVRQHGLALVSLARLDDAIASGARETGLVTLFLERRGQWLEALSGEGGGVHGEDKETLSGHVLSKLTRAVQALKRTVLDAHTLFIVGEESGASEEDQALRDLRRAGRIVAEATTAWLGGWLVKVHSQAHRSLKTLKSSSDLARVRKALWQETHASLVGPGLGEDGQREQSGRSPKGVRLWREACRAVIHPESLRQALSKANLPCCWVSTPSLDGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVSSSPSSSSSLGQDRRFTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPASLPSSSSLTPPSCPSDMDAVLILARFAWRLLTTAPRTLLSPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLDTLGLSQASSSPPSSYPPSSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQDGIKGKSGEGELGGREEDNSEACRLEGQAQHGQGDGASGHSLSSSSFNPFLVTLLESFRRALVQEARRKLEIMYTIAGNAGGKGGLEMKNMVEDDVLQAVFDVNFLRYWFEHECGEISAVSSPSSPTFLNVGAEGTNWLGRTLRTLNDAMDPVNFEAFDPLVKEGVLSYSQGCALIMSHLCSRPGAHARRAMDIGSDIGRTTSLSMSRRSSIEEMLKNDKNVAGYSAQVLPLVPAVPRFTLLPVMVEASTPTAALLSPARVNGKVEPGKENRRSSFTFSDIMDVGGVGVGPNGIGRGKVGAGASAAASVVGSAASNVLSSLFGGGRRGQGIS 1237
            MEAIEESLGGELTVERVRREMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQEKRLHSHLRPWREVAAAAIAQQQERQQQPGAFPLTREDVVYMLHAPTRLWEAMDAGRYLAAASTWTTAKDIADKIAEQAASAASTNTSNPALSSGDDSIRDDEEGRMRKWTATQRQVQLVIGNQWACLKDLKSSIISGAHALLADQNVLDVRQHGLALVSLARLDDAIASGARETGLVTLFLERRGQWLEALSGEGGGVHGEDKETLSGHVLSKLTRAVQALKRTVLDAHTLFIVGEESGASEEDQALRDLRRAGRIVAEATTAWLGGWLVKVHSQAHRSLKTLKSSSDLARVRKALWQETHASLVGPGLGEDGQREQSGRSPKGVRLWREACRAVIHPESLRQALSKANLPCCWVSTPSLDGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVSSSPSSSSSLGQDRRFTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPASLPSSSSLTPPSCPSDMDAVLILARFAWRLLTTAPRTLLSPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLDTLGLSQASSSPPSSYPPSSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQDGIKGKSGEGELGGREEDNSEACRLEGQAQHGQGDGASGHSLSSSSFNPFLVTLLESFRRALVQEARRKLEIMYTIAGNAGGKGGLEMKNMVEDDVLQAVFDVNFLRYWFEHECGEISAVSSPSSPTFLNVGAEGTNWLGRTLRTLNDAMDPVNFEAFDPLVKEGVLSYSQGCALIMSHLCSRPGAHARRAMDIGSDIGRTTSLSMSRRSSIEEMLKNDKNVAGYSAQVLPLVPAVPRFTLLPVMVEASTPTAALLSPARVNGKVEPGKENRRSSFTFSDIMDVGGVGVGPNGIGRGKVGAGASAAASVVGSAASNVLSSLFGGGRRGQGIS
Sbjct:    1 MEAIEESLGGELTVERVRREMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQEKRLHSHLRPWREVAAAAIAQQQERQQQPGAFPLTREDVVYMLHAPTRLWEAMDAGRYLAAASTWTTAKDIADKIAEQAASAASTNTSNPALSSGDDSIRDDEEGRMRKWTATQRQVQLVIGNQWACLKDLKSSIISGAHALLADQNVLDVRQHGLALVSLARLDDAIASGARETGLVTLFLERRGQWLEALSGEGGGVHGEDKETLSGHVLSKLTRAVQALKRTVLDAHTLFIVGEESGASEEDQALRDLRRAGRIVAEATTAWLGGWLVKVHSQAHRSLKTLKSSSDLARVRKALWQETHASLVGPGLGEDGQREQSGRSPKGVRLWREACRAVIHPESLRQALSKANLPCCWVSTPSLDGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVSSSPSSSSSLGQDRRFTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPASLPSSSSLTPPSCPSDMDAVLILARFAWRLLTTAPRTLLSPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLDTLGLSQASSSPPSSYPPSSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQDGIKGKSGEGELGGREEDNSEACRLEGQAQHGQGDGASGHSLSSSSFNPFLVTLLESFRRALVQEARRKLEIMYTIAGNAGGKGGLEMKNMVEDDVLQAVFDVNFLRYWFEHECGEISAVSSPSSPTFLNVGAEGTNWLGRTLRTLNDAMDPVNFEAFDPLVKEGVLSYSQGCALIMSHLCSRPGAHARRAMDIGSDIGRTTSLSMSRRSSIEEMLKNDKNVAGYSAQVLPLVPAVPRFTLLPVMVEASTPTAALLSPARVNGKVEPGKENRRSSFTFSDIMDVGGVGVGPNGIGRGKVGAGASAAASVVGSAASNVLSSLFGGGRRGQGIS 1237          
BLAST of EWM22886.1 vs. NCBI_GenBank
Match: gi|298710517|emb|CBJ25581.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 98.5969 bits (244), Expect = 5.081e-17
Identity = 160/670 (23.88%), Postives = 253/670 (37.76%), Query Frame = 0
Query:  284 KETLSGHVLSKLTRAVQALKRTVLDAHTLFIVGEESGASEEDQA------LRDLRRAGRIVAEATTAWLGGWLVKVHSQAHRSLKTLKSSSDLARVRKALWQETHA--SLVGPGLGEDGQREQSGRSPKGVR--LWREACRAVIHPESLRQALSKANLPCCWVSTPSLDGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVSS-----------SPSSSSSLGQDRRFTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPA-----SLPSSSSL--TPPSCPSDMDAVLILARFAWRLLTTAPRTLLSPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLD--TLGLSQASSSPPSSYPPSSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQDGIKGKSGEGELGGREED 923
            KE  S  +   L  AV  ++RT++D H +F  G       ED A         LR +     +  T WL     K+     R L+    ++ LAR+R +LW+ TH   +   P  G      ++G S + V+  +W EA                       V   + DG T    R+  G+  SS                        LD+W+ LFS  FA + E L + S+ S+ +    + + IL  ++            S S S    Q     A ++  AAD +   L   +R +   A  L + GD+ AA AL +S +  ++ + + L++  R  LQE                 IH    S A      +P    +     +  S  DA L++ R AW L   +   L    +P                C +         RRRG         I+  QLE+AF IAD+ G+G +   E  E L   + G S A +  PS Y  +S T  E  L     L+E +P    T+ L      +    L  W+   +      +L EG   + +  A   N GM +   D  R     WE++ +  + ++G  +++ +  P   SP +  +   +AAEL R+    D  +    E   G + +D
Sbjct:  235 KEENSSDIEQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSCRSQASLRLSAHDAKDMCTTWLSVLTPKIRVFGERLLRATGDTNSLARIRGSLWKVTHGDGAWATPAAGT-----RAGGSIRAVQGLMWMEATSFA-------------------VDVSAWDGGTNGSTRAW-GQDVSSPQ----------------------LDLWSLLFSQIFADLAEALLKDSLASIRRDVECRLDSILLAITRNETGQGVQEARSFSGSHRQEQPHALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQE-----------------IHACIKSAAEQERRCVPYGGRIGDLENAVSSFADAGLLIGRVAWMLNGRSGGPLQYALTP--------------PACFA--------QRRRGR--------IEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAALAVDPSRY--ASFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSES----LAVWSEWALEK-SAALLTEGCNAMVILCA---NPGMTN---DLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGWKTQD 797          

HSP 2 Score: 71.633 bits (174), Expect = 8.785e-9
Identity = 49/142 (34.51%), Postives = 79/142 (55.63%), Query Frame = 0
Query:   12 LTVERVRREMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQEKRLHSHLRPWREVAAAAIAQQQERQQQPGAFPLTREDVVYMLHAPTRLWEAMDAGRYLAAA-------STWT 146
            ++VE+    + TLS  +  KQTE+QL+VGSRYHELIESAD+++ M ++   +  +L  + P   +++LQ+  + S L P      + ++    R+       +  E V  MLHAP  +W A+D+ + L AA       S+WT
Sbjct:   11 MSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGAEVLGLLR-KFPQACSNVLQQ--VPSSLSP----GTSDLSGTDVREDAAARHVM--EVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWT 143          
BLAST of EWM22886.1 vs. NCBI_GenBank
Match: gi|1005423862|ref|XP_015773605.1| (PREDICTED: conserved oligomeric Golgi complex subunit 1-like isoform X1 [Acropora digitifera])

HSP 1 Score: 67.0106 bits (162), Expect = 2.387e-7
Identity = 77/314 (24.52%), Postives = 140/314 (44.59%), Query Frame = 0
Query:    2 EAIEESLGGELTVERVRR-EMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQE-KRLHSHLRPWREVAAAAIAQQQERQQQPGAFPLTREDVVYMLHAPTRLWEAMDAGRYLAAASTWTTAKDIADKIAEQAASAASTNTSNPALSSGDDSIRDDEEGRMRKWTATQRQVQLVIGNQWACLKDLKSSIISGAHALLADQNVLDVRQHGLALVSLARLDDAIASGARETGLVTLFLERRGQWLEALSGEGGGVHGEDKETLSGHVLSKLTRAVQALKRTVLDAHTLF 313
            E   ++L    TV  +R  E KT S+ I+ K+ +++L+VG RY +LI++AD V +M K+C+        +V   V D+ ++ K LHS  R      + ++A  +   Q    F      +  +++ P ++W A++  +YL AA  +  ++ I   +        + ++S P L S                         ++  QWA +   K SI+ G+ ALL+D +  +      +L S+  L++   S  R+  + T FL  R   L+ +       H     T    + S++   VQ ++R++   H LF
Sbjct:   35 EMDSDALFSNHTVVEIRAVENKTRSD-IERKKEDLRLMVGERYRDLIDAADTVTEM-KTCSK-------QVMSFVQDIQKQCKELHSSHRCHGFGGSQSVANTESTSQTKAGFYTIASQMKLLVNTPEKVWSALERKQYLKAAQLYLFSRHIVSIL-----HIDTGDSSAPKLLSSFP----------------------ILPKQWAAISHFKDSILQGSRALLSDASQTE-EMLAESLCSILLLEE---SSPRQ--VFTEFLLARKAALQEV------FHPCQHAT---SIKSQVCEVVQIIRRSLYQIHALF 297          
The following BLAST results are available for this feature:
BLAST of EWM22886.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585103544|gb|EWM22886.1|0.000e+0100.00uncharacterized protein Naga_100160g7 [Nannochloro... [more]
gi|298710517|emb|CBJ25581.1|5.081e-1723.88conserved unknown protein [Ectocarpus siliculosus][more]
gi|1005423862|ref|XP_015773605.1|2.387e-724.52PREDICTED: conserved oligomeric Golgi complex subu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7809rna7809Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications