EWM22891.1, cds7786 (CDS) Nannochloropsis gaditana

Overview
NameEWM22891.1
Unique Namecds7786
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:14068..15519 -
Alignment locationCM002474.1:12455..13927 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22891.1
Productcdk5 regulatory subunit-associated protein 1
Orig transcript idgnl|cribi|Naga_100160g5.4651.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:14068..15519 -
CM002474.1supercontigCM002474.1:12455..13927 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0043412macromolecule modification
GO:0009451RNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
GO:00515394 iron, 4 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR020612Methylthiotransferase_CS
IPR023970MeThioTfrase/rSAM
IPR005839Methylthiotransferase
IPR023404rSAM_horseshoe
IPR013848Methylthiotransferase_N
IPR006466MiaB-like_B
IPR007197rSAM
IPR006638Elp3/MiaB/NifB
Homology
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|585103549|gb|EWM22891.1| (cdk5 regulatory subunit-associated protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 1988 bits (5149), Expect = 0.000e+0
Identity = 974/974 (100.00%), Postives = 974/974 (100.00%), Query Frame = 0
Query:    1 MPSGGDTSQCSISPTPDPQKSDSNGKHRHHRSKRRSAKAPVPPPPVDDIEELVTPDDWAQDSFRQPNPSASGLVILPRKILTKKSNIGTKASTSSKASEPTEEAPTTDGTSTGHKASQEADTMMTAGDGQASVPLPHSSSTSPELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKKIREPRRREGEKKSGEVVVRERKGGYPTRGRKERRERRGEGAGVSVAGKTRPATRVEGAKAGTTAWWWRWFPRLYPGVGSGNQTYGTEGSYTHRDSQQRNAVVEGNRGSEGEIVVKRESAERRKYSGGINNQIDQAAAILPASVPSSSTEKATVTTATSSEPPLGHEGEQGGEAMTAVRLSVASSRLPDKDRPEGDPSFSASASSSSSSTSSSIVAAATSSSLPSLFPHASHPTDGACLPSSLPVPHRRSGDISPAAVSTAQGGSEGGVRRREQAGHSSAVPRPHPHARQPSQASGKRSNVPEESGKAEVSGESLSANTSSTLSGGSTSFFSHFFLGGSSARLAPVSSMLWLTAKTEVTSVSFWALLALLCLISSWLAQLNGVLD 974
            MPSGGDTSQCSISPTPDPQKSDSNGKHRHHRSKRRSAKAPVPPPPVDDIEELVTPDDWAQDSFRQPNPSASGLVILPRKILTKKSNIGTKASTSSKASEPTEEAPTTDGTSTGHKASQEADTMMTAGDGQASVPLPHSSSTSPELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKKIREPRRREGEKKSGEVVVRERKGGYPTRGRKERRERRGEGAGVSVAGKTRPATRVEGAKAGTTAWWWRWFPRLYPGVGSGNQTYGTEGSYTHRDSQQRNAVVEGNRGSEGEIVVKRESAERRKYSGGINNQIDQAAAILPASVPSSSTEKATVTTATSSEPPLGHEGEQGGEAMTAVRLSVASSRLPDKDRPEGDPSFSASASSSSSSTSSSIVAAATSSSLPSLFPHASHPTDGACLPSSLPVPHRRSGDISPAAVSTAQGGSEGGVRRREQAGHSSAVPRPHPHARQPSQASGKRSNVPEESGKAEVSGESLSANTSSTLSGGSTSFFSHFFLGGSSARLAPVSSMLWLTAKTEVTSVSFWALLALLCLISSWLAQLNGVLD
Sbjct:    1 MPSGGDTSQCSISPTPDPQKSDSNGKHRHHRSKRRSAKAPVPPPPVDDIEELVTPDDWAQDSFRQPNPSASGLVILPRKILTKKSNIGTKASTSSKASEPTEEAPTTDGTSTGHKASQEADTMMTAGDGQASVPLPHSSSTSPELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKKIREPRRREGEKKSGEVVVRERKGGYPTRGRKERRERRGEGAGVSVAGKTRPATRVEGAKAGTTAWWWRWFPRLYPGVGSGNQTYGTEGSYTHRDSQQRNAVVEGNRGSEGEIVVKRESAERRKYSGGINNQIDQAAAILPASVPSSSTEKATVTTATSSEPPLGHEGEQGGEAMTAVRLSVASSRLPDKDRPEGDPSFSASASSSSSSTSSSIVAAATSSSLPSLFPHASHPTDGACLPSSLPVPHRRSGDISPAAVSTAQGGSEGGVRRREQAGHSSAVPRPHPHARQPSQASGKRSNVPEESGKAEVSGESLSANTSSTLSGGSTSFFSHFFLGGSSARLAPVSSMLWLTAKTEVTSVSFWALLALLCLISSWLAQLNGVLD 974          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|953496206|emb|CEG41806.1| (-like trna modifying archaeal-type [Plasmopara halstedii])

HSP 1 Score: 565.074 bits (1455), Expect = 0.000e+0
Identity = 281/456 (61.62%), Postives = 336/456 (73.68%), Query Frame = 0
Query:  132 SVPLPHSSSTSPELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLS 587
            S+      S S +L VPGTQ +W+ T+GCSHNVSDSEYM+G+L+SYGY     P  D A LWLLNSCTVK+PSQ    +L+ K + Q KAVVVAGCVPQ DR+L  LEG S+VGI Q++RVVEVVE++L GHVVRLLSK  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  E I  RA  V+   EGVTEIWLSSEDTGAYG D++       T LP LL  L  +LP  VMLRVGMTNPP+IL+ L++IA  L H  V+ FLHVPVQSGS+ VL AMNREYTV EFC V D L   VP +T+ATDIICGFP E E+ F ET+ LV+KY+F I NISQFYPRPGTPAAKM ++P+Q VK RSR+LT+LFE F+PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +V ++  AR+HV G+++S
Sbjct:   46 SINTADGDSESMKLHVPGTQLIWMKTYGCSHNVSDSEYMQGVLASYGYRFTESP--DIAQLWLLNSCTVKDPSQAAFMHLVIKGRKQNKAVVVAGCVPQADRHLKGLEGVSIVGIQQVDRVVEVVEETLKGHVVRLLSKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEVIVSRAQSVI--NEGVTEIWLSSEDTGAYGIDID-------TDLPALLHKLLQVLPDGVMLRVGMTNPPYILNHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLQAMNREYTVAEFCRVADELLAKVPDLTLATDIICGFPTELEKHFDETMKLVEKYRFHIMNISQFYPRPGTPAAKMKRIPTQVVKTRSRKLTKLFEGFDPYHHLVGTNDK--VWINTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCTAEVHVITAARFHVVGKVIS 488          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|695395033|ref|XP_009521061.1| (hypothetical protein PHYSODRAFT_555473 [Phytophthora sojae] >gi|348685958|gb|EGZ25773.1| hypothetical protein PHYSODRAFT_555473 [Phytophthora sojae])

HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0
Identity = 284/470 (60.43%), Postives = 343/470 (72.98%), Query Frame = 0
Query:  144 ELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKK--------IREPRRREGEKKSGE 605
            E  VPG+Q +W+ T+GCSHNVSDSEYM+G+L+SYGY    +P  D A LWLLNSCTVK+PSQ    +L+ K + Q KAVVVAGCVPQ DR+L  LE  S+VGI Q++RVVEVVE++L GH VRLLSK  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  EAI  RA  V+   EGVTEIWLSSEDTGAYG D+        T LP LL  L +++P  VMLRVGMTNPP+ILD L++IA  L+H  V+ FLHVPVQSGS+ VL AMNREYT  EF  V D L   VP +T+ATDIICGFP ETEE F ET+ LV+KY+F I NISQFYPRPGTPAAKM +VP+Q VK+RSR+LT+LFE+F PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +VR++  AR+H+ GE++S  +        IRE  R EG+  + +
Sbjct:   55 EPSVPGSQLIWMKTYGCSHNVSDSEYMQGVLASYGYRFTQDP--DAAQLWLLNSCTVKDPSQAAFMHLVVKGRKQSKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGHTVRLLSKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVI--SEGVTEIWLSSEDTGAYGIDI-------GTDLPTLLRKLLEVVPDGVMLRVGMTNPPYILDHLDAIAEVLKHERVYSFLHVPVQSGSDDVLLAMNREYTAAEFRRVADELLAKVPDLTLATDIICGFPSETEEHFDETMDLVEKYRFHIMNISQFYPRPGTPAAKMKRVPTQVVKNRSRKLTKLFETFEPYTHLVGTTQ--KVWVNTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCSAEVRVLTAARFHITGEVISRSQPATVAAAAIREQIRTEGDLSAAD 511          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|970655423|gb|KUF93588.1| (hypothetical protein AM588_10005028 [Phytophthora nicotianae])

HSP 1 Score: 561.222 bits (1445), Expect = 0.000e+0
Identity = 285/470 (60.64%), Postives = 340/470 (72.34%), Query Frame = 0
Query:  144 ELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKK--------IREPRRREGEKKSGE 605
            E  VPGTQ +W+ T+GCSHNVSDSEYM+G+L+SYGY    +P  D A LWLLNSCTVK+PSQ    +L  K + Q KAVVVAGCVPQ DR+L  LE  S+VGI Q++RVVEVVE++L GH VRLL+K  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  EAI  RA  V+   EGVTEIWLSSEDTGAYG D+        T LP L+  L  ++P  VMLRVGMTNPP+ILD L++IA  L H  V+ FLHVPVQSGS+ VL AMNREYT  EF  V D L   VP +T+ATDIICGFP ETEE F ET+ LV+KY+F I NISQFYPRPGTPAAKM +VP+Q VK+RSR+LT+LFE+F PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +VR++  AR+HV GE++S  +        IRE  R EGE  + +
Sbjct:   55 EPSVPGTQLIWIKTYGCSHNVSDSEYMQGVLASYGYRFTQDP--DAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGHTVRLLAKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVI--NEGVTEIWLSSEDTGAYGIDI-------GTDLPTLMRKLLVVVPDGVMLRVGMTNPPYILDHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLLAMNREYTAAEFRRVADELLAKVPNLTLATDIICGFPTETEEHFDETMELVEKYRFHIMNISQFYPRPGTPAAKMKRVPTQVVKNRSRKLTKLFETFEPYTHLVGTTQK--VWVNTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCTAEVRVLTAARFHVTGEVISRSQPCTVAAAAIREQIRTEGELSAAD 511          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|675206795|ref|XP_008912282.1| (MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica INRA-310] >gi|568087374|gb|ETN02245.1| MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica INRA-310])

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 285/470 (60.64%), Postives = 339/470 (72.13%), Query Frame = 0
Query:  144 ELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKK--------IREPRRREGEKKSGE 605
            E  VPGTQ +W+ T+GCSHNVSDSEYM+G L+SYGY    +P  D A LWLLNSCTVK+PSQ    +L  K + Q KAVVVAGCVPQ DR+L  LE  S+VGI Q++RVVEVVE++L GH VRLL+K  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  EAI  RA  V+   EGVTEIWLSSEDTGAYG D+        T LP L+  L  ++P  VMLRVGMTNPP+ILD L++IA  L H  V+ FLHVPVQSGS+ VL AMNREYT  EF  V D L   VP +T+ATDIICGFP ETEE F ET+ LV+KY+F I NISQFYPRPGTPAAKM +VP+Q VK+RSR+LT+LFE+F PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +VR++  AR+HV GE++S  +        IRE  R EGE  + +
Sbjct:   55 EPSVPGTQLIWIKTYGCSHNVSDSEYMQGALASYGYRFTQDP--DAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGHTVRLLAKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVI--NEGVTEIWLSSEDTGAYGIDI-------GTDLPTLMRKLLVVVPDGVMLRVGMTNPPYILDHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLLAMNREYTAAEFRRVADELLAKVPNLTLATDIICGFPTETEEHFDETMELVEKYRFHIMNISQFYPRPGTPAAKMKRVPTQVVKNRSRKLTKLFETFEPYTHLVGTTQK--VWVNTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCTAEVRVLTAARFHVTGEVISRSQPCTVAAAAIREQIRTEGELSAAD 511          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|566014064|gb|ETI36975.1| (MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica P1569] >gi|567951495|gb|ETK77195.1| MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica] >gi|567980161|gb|ETL30630.1| MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica] >gi|568009657|gb|ETL83857.1| MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica] >gi|570941543|gb|ETP06800.1| MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica CJ01A1])

HSP 1 Score: 560.836 bits (1444), Expect = 0.000e+0
Identity = 285/470 (60.64%), Postives = 340/470 (72.34%), Query Frame = 0
Query:  144 ELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKK--------IREPRRREGEKKSGE 605
            E  VPGTQ +W+ T+GCSHNVSDSEYM+G+L+SYGY    +P  D A LWLLNSCTVK+PSQ    +L  K + Q KAVVVAGCVPQ DR+L  LE  S+VGI Q++RVVEVVE++L GH VRLL+K  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  EAI  RA  V+   EGVTEIWLSSEDTGAYG D+        T LP L+  L  ++P  VMLRVGMTNPP+ILD L++IA  L H  V+ FLHVPVQSGS+ VL AMNREYT  EF  V D L   VP +T+ATDIICGFP ETEE F ET+ LV+KY+F I NISQFYPRPGTPAAKM +VP+Q VK+RSR+LT+LFE+F PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +VR++  AR+HV GE++S  +        IRE  R EGE  + +
Sbjct:   55 EPSVPGTQLIWIKTYGCSHNVSDSEYMQGVLASYGYRFTQDP--DAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGHTVRLLAKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVI--NEGVTEIWLSSEDTGAYGIDI-------GTDLPTLMRKLLVVVPDGVMLRVGMTNPPYILDHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLLAMNREYTAAEFRRVADELLAKVPNLTLATDIICGFPTETEEHFDETMELVEKYRFHIMNISQFYPRPGTPAAKMKRVPTQVVKNRSRKLTKLFETFEPYTHLVGTTQK--VWVNTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCTAEVRVLTAARFHVTGEVISRSQPCTVAAAAIREQIRTEGELSAAD 511          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|970643748|gb|KUF84878.1| (Threonylcarbamoyladenosine tRNA methylthiotransferase [Phytophthora nicotianae])

HSP 1 Score: 560.451 bits (1443), Expect = 0.000e+0
Identity = 285/470 (60.64%), Postives = 339/470 (72.13%), Query Frame = 0
Query:  144 ELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKK--------IREPRRREGEKKSGE 605
            E  VPGTQ +W+ T+GCSHNVSDSEYM+G L+SYGY    +P  D A LWLLNSCTVK+PSQ    +L  K + Q KAVVVAGCVPQ DR+L  LE  S+VGI Q++RVVEVVE++L GH VRLL+K  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  EAI  RA  V+   EGVTEIWLSSEDTGAYG D+        T LP L+  L  ++P  VMLRVGMTNPP+ILD L++IA  L H  V+ FLHVPVQSGS+ VL AMNREYT  EF  V D L   VP +T+ATDIICGFP ETEE F ET+ LV+KY+F I NISQFYPRPGTPAAKM +VP+Q VK+RSR+LT+LFE+F PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +VR++  AR+HV GE++S  +        IRE  R EGE  + +
Sbjct:   55 EPSVPGTQLIWIKTYGCSHNVSDSEYMQGXLASYGYRFTQDP--DAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGHTVRLLAKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVI--NEGVTEIWLSSEDTGAYGIDI-------GTDLPTLMRKLLVVVPDGVMLRVGMTNPPYILDHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLLAMNREYTAAEFRRVADELLAKVPNLTLATDIICGFPTETEEHFDETMELVEKYRFHIMNISQFYPRPGTPAAKMKRVPTQVVKNRSRKLTKLFETFEPYTHLVGTTQK--VWVNTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCTAEVRVLTAARFHVTGEVISRSQPCTVAAAAIREQIRTEGELSAAD 511          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|570971798|gb|ETP34905.1| (MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica P10297])

HSP 1 Score: 558.91 bits (1439), Expect = 0.000e+0
Identity = 284/470 (60.43%), Postives = 339/470 (72.13%), Query Frame = 0
Query:  144 ELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKK--------IREPRRREGEKKSGE 605
            E  VPGTQ +W+ T+GCSHNVSDSEYM+G+L+SYGY    +P  D A LWLLNSCTVK+PSQ    +L  K + Q KAVVVAGCVPQ DR+L  LE  S+VGI Q++RVVEVVE++L GH VRLL+K  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  EAI  RA  V+   EGVTEIWLSSEDTGAYG D+        T LP L+  L  ++P  VMLRVGMTNPP+ILD L++IA  L H  V+ FLHVPVQSGS+ VL AMNREYT  EF  V D L   VP +T+ATDIICGFP ETEE F ET+ LV+KY+F I NISQFYPRPGTPAAKM +VP+Q VK+RSR+LT+LF +F PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +VR++  AR+HV GE++S  +        IRE  R EGE  + +
Sbjct:   55 EPSVPGTQLIWIKTYGCSHNVSDSEYMQGVLASYGYRFTQDP--DAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGHTVRLLAKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVI--NEGVTEIWLSSEDTGAYGIDI-------GTDLPTLMRKLLVVVPDGVMLRVGMTNPPYILDHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLLAMNREYTAAEFRRVADELLAKVPNLTLATDIICGFPTETEEHFDETMDLVEKYRFHIMNISQFYPRPGTPAAKMKRVPTQVVKNRSRKLTKLFATFEPYTHLVGTTQK--VWVNTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCTAEVRVLTAARFHVTGEVISRSQPCTVAAAAIREQIRTEGELSAAD 511          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|570317751|gb|ETO65699.1| (MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica P1976])

HSP 1 Score: 558.91 bits (1439), Expect = 0.000e+0
Identity = 284/470 (60.43%), Postives = 339/470 (72.13%), Query Frame = 0
Query:  144 ELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKK--------IREPRRREGEKKSGE 605
            E  VPGTQ +W+ T+GCSHNVSDSEYM+G+L+SYGY    +P  D A LWLLNSCTVK+PSQ    +L  K + Q KAVVVAGCVPQ DR+L  LE  S+VGI Q++RVVEVVE++L GH VRLL+K  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  EAI  RA  V+   EGVTEIWLSSEDTGAYG D+        T LP L+  L  ++P  VMLRVGMTNPP+ILD L++IA  L H  V+ FLHVPVQSGS+ VL AMNREYT  EF  V D L   VP +T+ATDIICGFP ETEE F ET+ LV+KY+F I NISQFYPRPGTPAAKM +VP+Q VK+RSR+LT+LF +F PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +VR++  AR+HV GE++S  +        IRE  R EGE  + +
Sbjct:   55 EPSVPGTQLIWIKTYGCSHNVSDSEYMQGVLASYGYRFTQDP--DAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGHTVRLLAKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVI--NEGVTEIWLSSEDTGAYGIDI-------GTDLPTLMRKLLVVVPDGVMLRVGMTNPPYILDHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLLAMNREYTAAEFRRVADELLAKVPNLTLATDIICGFPTETEEHFDETMELVEKYRFHIMNISQFYPRPGTPAAKMKRVPTQVVKNRSRKLTKLFATFEPYTHLVGTTQK--VWVNTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCTAEVRVLTAARFHVTGEVISRSQPCTVAAAAIREQIRTEGELSAAD 511          
BLAST of EWM22891.1 vs. NCBI_GenBank
Match: gi|568039566|gb|ETM37054.1| (MiaB-like tRNA modifying enzyme, archaeal-type [Phytophthora parasitica])

HSP 1 Score: 558.91 bits (1439), Expect = 0.000e+0
Identity = 284/470 (60.43%), Postives = 339/470 (72.13%), Query Frame = 0
Query:  144 ELGVPGTQRLWVATFGCSHNVSDSEYMEGMLSSYGYTLVPEPERDTAALWLLNSCTVKNPSQQGVTNLIAKAQAQGKAVVVAGCVPQGDRNLAALEGCSLVGIAQIERVVEVVEQSLAGHVVRLLSKATLPRLDLPKVRKNPSVEIIPLSTGCLGACTYCKTRHARGKLGSYALEAIWERANQVLEEGEGVTEIWLSSEDTGAYGRDLEGAGGKESTMLPRLLTGLTDMLPPDVMLRVGMTNPPFILDQLESIATCLRHPNVFEFLHVPVQSGSNRVLTAMNREYTVEEFCLVVDTLRRLVPGMTVATDIICGFPGETEEDFQETLALVDKYKFAICNISQFYPRPGTPAAKMPKVPSQQVKDRSRRLTRLFESFNPYAGMEDTSGPVTVWFNRERSADGQHAVGHTKAYVKVLVPWEEGREGVVGQVRIVGVARWHVWGEMLSWKK--------IREPRRREGEKKSGE 605
            E  VPGTQ +W+ T+GCSHNVSDSEYM+G+L+SYGY    +P  D A LWLLNSCTVK+PSQ    +L  K + Q KAVVVAGCVPQ DR+L  LE  S+VGI Q++RVVEVVE++L GH VRLL+K  LP LDLPK+RKNP VEIIPLSTGCLGACTYCKTRHARGKLGSY  EAI  RA  V+   EGVTEIWLSSEDTGAYG D+        T LP L+  L  ++P  VMLRVGMTNPP+ILD L++IA  L H  V+ FLHVPVQSGS+ VL AMNREYT  EF  V D L   VP +T+ATDIICGFP ETEE F ET+ LV+KY+F I NISQFYPRPGTPAAKM +VP+Q VK+RSR+LT+LF +F PY  +  T+    VW N E S D ++ V HTK Y KVL+P ++   G   +VR++  AR+HV GE++S  +        IRE  R EGE  + +
Sbjct:   59 EPSVPGTQLIWIKTYGCSHNVSDSEYMQGVLASYGYRFTQDP--DAAQLWLLNSCTVKDPSQAAFMHLAVKGRKQNKAVVVAGCVPQADRHLKGLEEVSIVGIQQVDRVVEVVEETLKGHTVRLLAKNRLPELDLPKIRKNPMVEIIPLSTGCLGACTYCKTRHARGKLGSYTPEAIVSRAQTVI--NEGVTEIWLSSEDTGAYGIDI-------GTDLPTLMRKLLVVVPDGVMLRVGMTNPPYILDHLDAIAEVLNHDRVYSFLHVPVQSGSDDVLLAMNREYTAAEFRRVADELLAKVPNLTLATDIICGFPTETEEHFDETMELVEKYRFHIMNISQFYPRPGTPAAKMKRVPTQVVKNRSRKLTKLFATFEPYTHLVGTTQK--VWVNTEVSDDKKYTVAHTKNYTKVLLPRDDSLIGCTAEVRVLTAARFHVTGEVISRSQPCTVAAAAIREQIRTEGELSAAD 515          
The following BLAST results are available for this feature:
BLAST of EWM22891.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103549|gb|EWM22891.1|0.000e+0100.00cdk5 regulatory subunit-associated protein 1 [Nann... [more]
gi|953496206|emb|CEG41806.1|0.000e+061.62-like trna modifying archaeal-type [Plasmopara hal... [more]
gi|695395033|ref|XP_009521061.1|0.000e+060.43hypothetical protein PHYSODRAFT_555473 [Phytophtho... [more]
gi|970655423|gb|KUF93588.1|0.000e+060.64hypothetical protein AM588_10005028 [Phytophthora ... [more]
gi|675206795|ref|XP_008912282.1|0.000e+060.64MiaB-like tRNA modifying enzyme, archaeal-type [Ph... [more]
gi|566014064|gb|ETI36975.1|0.000e+060.64MiaB-like tRNA modifying enzyme, archaeal-type [Ph... [more]
gi|970643748|gb|KUF84878.1|0.000e+060.64Threonylcarbamoyladenosine tRNA methylthiotransfer... [more]
gi|570971798|gb|ETP34905.1|0.000e+060.43MiaB-like tRNA modifying enzyme, archaeal-type [Ph... [more]
gi|570317751|gb|ETO65699.1|0.000e+060.43MiaB-like tRNA modifying enzyme, archaeal-type [Ph... [more]
gi|568039566|gb|ETM37054.1|0.000e+060.43MiaB-like tRNA modifying enzyme, archaeal-type [Ph... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7807rna7807Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications