EWM22895.1, cds7779 (CDS) Nannochloropsis gaditana

Overview
NameEWM22895.1
Unique Namecds7779
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:423453..423615 -
Alignment locationCM002473.1:422916..423097 -
Alignment locationCM002473.1:422654..422749 -
Alignment locationCM002473.1:422372..422428 -
Alignment locationCM002473.1:422015..422142 -
Alignment locationCM002473.1:421392..421719 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22895.1
ProductNUDIX hydrolase domain-like protein
Orig transcript idgnl|cribi|Naga_100320g2.4071.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:423453..423615 -
CM002473.1supercontigCM002473.1:422916..423097 -
CM002473.1supercontigCM002473.1:422654..422749 -
CM002473.1supercontigCM002473.1:422372..422428 -
CM002473.1supercontigCM002473.1:422015..422142 -
CM002473.1supercontigCM002473.1:421392..421719 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR020084NUDIX_hydrolase_CS
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase_dom-like
IPR003293Nudix_hydrolase6-like
Homology
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|585103554|gb|EWM22895.1| (NUDIX hydrolase domain-like protein [Nannochloropsis gaditana])

HSP 1 Score: 648.277 bits (1671), Expect = 0.000e+0
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0
Query:    1 MPASSSPSSPTSSSFPSPPPLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRDALPENEGKARPVTAIMGTQLELGFKPGAAWLYHTSEWHHEKHGGKGEGEDGLEEGKGAKKGAGNHERG 317
            MPASSSPSSPTSSSFPSPPPLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRDALPENEGKARPVTAIMGTQLELGFKPGAAWLYHTSEWHHEKHGGKGEGEDGLEEGKGAKKGAGNHERG
Sbjct:    1 MPASSSPSSPTSSSFPSPPPLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRDALPENEGKARPVTAIMGTQLELGFKPGAAWLYHTSEWHHEKHGGKGEGEDGLEEGKGAKKGAGNHERG 317          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|553178981|ref|XP_005852631.1| (hypothetical protein NGA_0727300, partial [Nannochloropsis gaditana CCMP526] >gi|422295902|gb|EKU23201.1| hypothetical protein NGA_0727300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0
Identity = 315/318 (99.06%), Postives = 315/318 (99.06%), Query Frame = 0
Query:    1 MPASSS-PSSPTSSSFPSPPPLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRDALPENEGKARPVTAIMGTQLELGFKPGAAWLYHTSEWHHEKHGGKGEGEDGLEEGKGAKKGAGNHERG 317
            MPASSS PS PTSSSFPSP PLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRDALPENEGKARPVTAIMGTQLELGFKPGAAWLYHTSEWHHEKHGGKGEGEDGLEEGKGAKKGAGNHERG
Sbjct:   33 MPASSSLPSPPTSSSFPSPSPLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRDALPENEGKARPVTAIMGTQLELGFKPGAAWLYHTSEWHHEKHGGKGEGEDGLEEGKGAKKGAGNHERG 350          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|1004142205|gb|KXZ50193.1| (hypothetical protein GPECTOR_17g830 [Gonium pectorale])

HSP 1 Score: 226.098 bits (575), Expect = 8.677e-70
Identity = 117/222 (52.70%), Postives = 141/222 (63.51%), Query Frame = 0
Query:   26 DPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPH--EIAACDWVPLSLFLSQPRFLASPLYACVYD 245
            D YDG I+    LP DP  FA  L  SLAAW     RG+WLKL L  +  +PVAA  GF FHHAE+DYVMMT WL    PCTLP   +HQVGVGA V++  G+ +L VQE+SG LRG GVWKMPTGL+  GED    AERE+ EETGV+AR + ++A R AH FAFGKSDLF +  +  E +   +P P   E+ A  W PLS +  Q  F   PLY  + D
Sbjct:   18 DNYDGKIVSSASLPADPASFAARLRRSLAAWGDAGARGVWLKLGLAQSGLIPVAAEQGFEFHHAERDYVMMTRWLPTSSPCTLPANASHQVGVGAFVVNAAGQ-VLLVQERSGVLRGRGVWKMPTGLVAAGEDFTQAAERELLEETGVTARVECVLAIRQAHGFAFGKSDLFIVVGMRPEPEGQ-EPVPQEAELVAARWAPLSEYTDQEFFRGMPLYEKMLD 237          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|168003972|ref|XP_001754686.1| (predicted protein [Physcomitrella patens] >gi|162694307|gb|EDQ80656.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 226.868 bits (577), Expect = 5.099e-69
Identity = 119/232 (51.29%), Postives = 151/232 (65.09%), Query Frame = 0
Query:   26 DPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRDALPENEGK 257
            D Y+G+IID + LP D  +F ++L  S+A W+ + + GIWLKLP+     V  A ++GF +HHAE  Y+M+T WL +G PCTLPP  +HQVGVGA VL+   + ILAVQEK+GPL+GTGVWKMPTGL + GEDI  GA REVKEETGV ARF  ++ FR  H   F KSDLFFL  L     + +     EIAA  W+PLS F +QP F   P    + ++C   L   EGK
Sbjct:   41 DSYEGVIIDHRSLPSDASVFKKYLIASIAQWKKERKHGIWLKLPIENVKLVEAAVAAGFGYHHAEPAYLMLTLWLPDG-PCTLPPNASHQVGVGAFVLNDKNE-ILAVQEKNGPLKGTGVWKMPTGLTNQGEDIFDGAIREVKEETGVDARFVEVVGFRQGHQCQFDKSDLFFLCILR-PTSTEIVAQESEIAAAKWMPLSEFKAQPIFDTRPTMKKMLEVC---LARVEGK 266          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|633912051|gb|KDD76093.1| (hypothetical protein H632_c359p1 [Helicosporidium sp. ATCC 50920])

HSP 1 Score: 221.476 bits (563), Expect = 2.323e-67
Identity = 119/250 (47.60%), Postives = 151/250 (60.40%), Query Frame = 0
Query:    1 MPASSSPSSPTSSSFPSPPPLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVE-DDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRD 249
            M ASSS  +P          L    D Y+G +ID + LP  P      L  S A WR +  RGIWL+LP  LA     A  +GF FHHAE++Y+M+T W+ EG+P  LPP  +HQVG+GA V+++ GK ILAV+E  GPLRGTGVWK+PTGL+ VGEDI   AEREV EETGV ARF  ++  R AH  AFGKSD+FFL  L  E   + L+P   E+    W+  +    QP F+  PL+  +   CRD
Sbjct:    1 MTASSSAQTPGKKD-----ALAGREDAYNGFLIDLEGLPSSPEALLASLRASEAVWRERAYRGIWLRLPKRLAGSTGAAVEAGFEFHHAEKEYLMLTRWMVEGQPDALPPNASHQVGIGACVVNEHGK-ILAVRELYGPLRGTGVWKLPTGLVHVGEDITETAEREVLEETGVRARFAGVLGVRQAHNVAFGKSDMFFLVALTPEPGQTELRPQLEELEGACWMDPAELTEQPHFVKRPLFQSMLRACRD 244          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|302791974|ref|XP_002977753.1| (hypothetical protein SELMODRAFT_176548 [Selaginella moellendorffii] >gi|300154456|gb|EFJ21091.1| hypothetical protein SELMODRAFT_176548 [Selaginella moellendorffii])

HSP 1 Score: 218.394 bits (555), Expect = 2.934e-65
Identity = 107/222 (48.20%), Postives = 145/222 (65.32%), Query Frame = 0
Query:   26 DPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLC 247
            D Y+G+I+DP  LP D   F   L  SLA+WR + +RG+WLKLP+  ++ VP A  +GF +HHAE  Y+M+THWL +  PCTLP   +HQVG+GA V++   + +LAVQEK+GPL+GTG+WKMPTGL++  EDI AGA REVKEETG+   F  ++ FR  H  AF KSDLFF+  L     S +     EI    W+PLS F +Q  F +  +   + ++C
Sbjct:  100 DRYNGVIVDPDSLPADVPTFVDRLERSLASWREKQKRGVWLKLPIEKSNLVPHAIEAGFRYHHAEPTYLMLTHWLADS-PCTLPANASHQVGIGAFVVNDRDE-VLAVQEKNGPLKGTGIWKMPTGLINQAEDIFAGAIREVKEETGIDTEFVEVVGFRQGHHVAFEKSDLFFVCVLR-PLSSQITKQDSEIEDAKWMPLSEFGAQDFFQSRSMLKKILEVC 318          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|302795524|ref|XP_002979525.1| (hypothetical protein SELMODRAFT_110954 [Selaginella moellendorffii] >gi|300152773|gb|EFJ19414.1| hypothetical protein SELMODRAFT_110954 [Selaginella moellendorffii])

HSP 1 Score: 214.157 bits (544), Expect = 2.194e-64
Identity = 106/222 (47.75%), Postives = 143/222 (64.41%), Query Frame = 0
Query:   26 DPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLC 247
            D Y+G+I+DP  LP D   F   L  SLA+WR + +RG+WLKLP+  +  VP A  +GF +HHAE  Y+M+THWL +  PCTLP   +HQVG+GA V++   + +LAVQEK+GPL+GTG+WKMPTGL++  EDI AGA REVKEETG+   F  ++ FR  H  AF KSDLFF+  L     S +     EI    W+ LS F +Q  F +  +   + ++C
Sbjct:   44 DRYNGVIVDPDSLPADVPTFVYRLERSLASWREKQKRGVWLKLPIEKSILVPHAIEAGFRYHHAEPTYLMLTHWLADS-PCTLPANASHQVGIGAFVVNDRDE-VLAVQEKNGPLKGTGIWKMPTGLINQAEDIFAGAIREVKEETGIDTEFVEVVGFRQGHHVAFEKSDLFFVCVLR-PLSSEITKQDSEIEDAKWMSLSEFGAQDFFQSRSMLKKILEVC 262          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|298711520|emb|CBJ26608.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 211.075 bits (536), Expect = 3.569e-63
Identity = 106/217 (48.85%), Postives = 136/217 (62.67%), Query Frame = 0
Query:   21 LHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCT---LPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVE---DDSSLQPCPHEIAACDWVPLSLFLSQ 231
            L HT D YDG+ +D   LP     F   L  SL AWR   ++G+WLK+P      VPV+   GF  HHAE+ Y+M+  WL    P T   LP   +HQVGVGALVL++ G ++L V+E++GPLRGTG+WK PTGL+D GED+   A REV+EETG+   F  ++AFRH H   FGKSDLFF+ R+ +    D S+LQP   EI  C W+P  LF  Q
Sbjct:    3 LEHTTDIYDGVTVDGASLPATTEEFKSVLEASLEAWRSTGKKGVWLKVPADRTELVPVSIDLGFELHHAEKAYIMLNMWL----PSTASQLPANASHQVGVGALVLNEDG-DVLVVRERNGPLRGTGIWKFPTGLIDAGEDLPDAAAREVREETGLDTEFDSVLAFRHGHRGLFGKSDLFFVVRMRLTPGADSSALQPQESEIEECQWMPRKLFAKQ 214          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|567168581|ref|XP_006398421.1| (hypothetical protein EUTSA_v10000934mg [Eutrema salsugineum] >gi|557099510|gb|ESQ39874.1| hypothetical protein EUTSA_v10000934mg [Eutrema salsugineum])

HSP 1 Score: 213.001 bits (541), Expect = 4.508e-63
Identity = 108/251 (43.03%), Postives = 149/251 (59.36%), Query Frame = 0
Query:    1 MPASSSPSSPTSSSFPSPPPLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLCRDAL 251
            M A +  +    SS      L    D Y G+++D ++LP +P  F   L  SL+ WR + ++GIWLKLP+  +  VPVA   GF +HHAE+ YVM+T+W+ E +PC LP   +HQVGVG  VL++  K +L VQEK       G+WK+PTG ++  E+I +GA REVKEETGV + F  +IAFRHAH  AF KSDLFF+  L+   D  +     EI A  W+PL  F+ QP      ++  V ++C   L
Sbjct:   70 MNAVNLKNRTLISSVKEKLLLDAYDDEYGGVVVDHEKLPSNPNAFTSMLRNSLSDWRRKGKKGIWLKLPVEQSELVPVAVKEGFEYHHAEKGYVMLTYWIPEEEPCMLPGNASHQVGVGGFVLNR-HKEVLVVQEKYCTSSNAGLWKLPTGFINESEEIFSGAVREVKEETGVDSEFLEVIAFRHAHNVAFEKSDLFFICMLKPLSDKIIID-NLEIKAAKWMPLVEFVEQPMIKGDKMFKRVIEICEARL 318          
BLAST of EWM22895.1 vs. NCBI_GenBank
Match: gi|971510217|dbj|GAQ87990.1| (nudix hydrolase homolog [Klebsormidium nitens])

HSP 1 Score: 210.305 bits (534), Expect = 5.675e-63
Identity = 115/247 (46.56%), Postives = 148/247 (59.92%), Query Frame = 0
Query:    1 MPASSSPSSPTSSSFPSPPPLHHTPDPYDGIIIDPQQLPKDPCIFAQHLTESLAAWRLQHRRGIWLKLPLTLASHVPVAASSGFVFHHAEQDYVMMTHWLEEGKPCTLPPGPTHQVGVGALVLDKGGKNILAVQEKSGPLRGTGVWKMPTGLLDVGEDIGAGAEREVKEETGVSARFKHLIAFRHAHAFAFGKSDLFFLARLEVEDDSSLQPCPHEIAACDWVPLSLFLSQPRFLASPLYACVYDLC 247
            M AS   S+  +  F     L    D YDG+I++   LP     F   L  S+  W+ Q ++GIWLKLPL+    VP A  +GF +HHA+  Y M+T WL E  P TLP   +HQVGVGA +L+  G+ +LAVQEK+GPLRGTG+WK+PTGL + GEDI A A REVKEETG+ A F+ ++ FR AH  A GKSDLFF+  L       + P   EIA   W+ L  F  QP F   PL+  + D+C
Sbjct:    1 MDASPVASTSETHGFQV---LGAIEDRYDGMIVEADLLPSTVEEFRSRLEASILHWKAQGKKGIWLKLPLSHVDLVPTAIKAGFGYHHADPGYCMLTLWLPE-VPSTLPANASHQVGVGAFLLNDAGE-VLAVQEKNGPLRGTGIWKLPTGLANHGEDICAAAVREVKEETGIDAEFQEVLCFRQAHGIAHGKSDLFFVCALRAL-SHDITPQESEIADAKWLSLKSFREQPFFADRPLFRTMMDIC 241          
The following BLAST results are available for this feature:
BLAST of EWM22895.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103554|gb|EWM22895.1|0.000e+0100.00NUDIX hydrolase domain-like protein [Nannochlorops... [more]
gi|553178981|ref|XP_005852631.1|0.000e+099.06hypothetical protein NGA_0727300, partial [Nannoch... [more]
gi|1004142205|gb|KXZ50193.1|8.677e-7052.70hypothetical protein GPECTOR_17g830 [Gonium pector... [more]
gi|168003972|ref|XP_001754686.1|5.099e-6951.29predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|633912051|gb|KDD76093.1|2.323e-6747.60hypothetical protein H632_c359p1 [Helicosporidium ... [more]
gi|302791974|ref|XP_002977753.1|2.934e-6548.20hypothetical protein SELMODRAFT_176548 [Selaginell... [more]
gi|302795524|ref|XP_002979525.1|2.194e-6447.75hypothetical protein SELMODRAFT_110954 [Selaginell... [more]
gi|298711520|emb|CBJ26608.1|3.569e-6348.85conserved unknown protein [Ectocarpus siliculosus][more]
gi|567168581|ref|XP_006398421.1|4.508e-6343.03hypothetical protein EUTSA_v10000934mg [Eutrema sa... [more]
gi|971510217|dbj|GAQ87990.1|5.675e-6346.56nudix hydrolase homolog [Klebsormidium nitens][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7800rna7800Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications