EWM22905.1, cds7767 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|585103581|gb|EWM22905.1| (hypothetical protein Naga_100764g3 [Nannochloropsis gaditana]) HSP 1 Score: 1090.49 bits (2819), Expect = 0.000e+0 Identity = 527/527 (100.00%), Postives = 527/527 (100.00%), Query Frame = 0
Query: 1 MLCTKMRTKPLFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTGRLSALDLGGSACSASPQTTSSHVVGTNALPESHCLPNHESYRQPDSGTDIGSDSTSNNYTNPESDFPLTILPGVRFAKHCLQGYWSCAIQIPEPGSTTFPLLPPCDPRFKYKQAARKRVVIRARKPKTTLSTRIRVTTYNKRSLPNIFLDLPFGIEFVSAKGPSAKTADIQVDDFADEIFFLTSPLQKSKRVVSYKVKINVTEEFEDDTFNIDYGLFDGSIANATCRTEFPPLQVSVIRKGETTKMKKGKSM 527
MLCTKMRTKPLFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTGRLSALDLGGSACSASPQTTSSHVVGTNALPESHCLPNHESYRQPDSGTDIGSDSTSNNYTNPESDFPLTILPGVRFAKHCLQGYWSCAIQIPEPGSTTFPLLPPCDPRFKYKQAARKRVVIRARKPKTTLSTRIRVTTYNKRSLPNIFLDLPFGIEFVSAKGPSAKTADIQVDDFADEIFFLTSPLQKSKRVVSYKVKINVTEEFEDDTFNIDYGLFDGSIANATCRTEFPPLQVSVIRKGETTKMKKGKSM
Sbjct: 1 MLCTKMRTKPLFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTGRLSALDLGGSACSASPQTTSSHVVGTNALPESHCLPNHESYRQPDSGTDIGSDSTSNNYTNPESDFPLTILPGVRFAKHCLQGYWSCAIQIPEPGSTTFPLLPPCDPRFKYKQAARKRVVIRARKPKTTLSTRIRVTTYNKRSLPNIFLDLPFGIEFVSAKGPSAKTADIQVDDFADEIFFLTSPLQKSKRVVSYKVKINVTEEFEDDTFNIDYGLFDGSIANATCRTEFPPLQVSVIRKGETTKMKKGKSM 527
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|553177379|ref|XP_005852464.1| (hypothetical protein NGA_0695300 [Nannochloropsis gaditana CCMP526] >gi|422296069|gb|EKU23368.1| hypothetical protein NGA_0695300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 278/336 (82.74%), Postives = 293/336 (87.20%), Query Frame = 0
Query: 17 LLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTGRLSALDLGGSACSASPQ-----TTSSHVVGTNALPESHCLPNHESYRQPDSGTDIGSDSTSNNYTNPESDFPLTILP 347
+LA+SITSAAPAFMYGID FNEI+EYDPVNKVTRVV+ETDLN+R GSNAF FDE RNQMFW Y+GDK+GGPNLAGLYYWDQVTGAIDRI+SQ QSW NQRFP NA FY DPSTGNSYFVWVT GGSTVNFLPITYD+S NPIGV + IQR ITGPDFSPD M FGDIAIKTSTD LYLAT G FAKIDLDDAFEQPTLPYTEI GN PLQ+AFDCEEEILYGQQL+R SDNWYTIDLETGVATSIPDYSTTGRLSA DLGGSACSASPQ +SSHVVGTNALPESHCLPNHESY QPDSGTD+ SDS SNNY +PES F LTILP
Sbjct: 1 MLAVSITSAAPAFMYGIDSFNEIIEYDPVNKVTRVVKETDLNKRSGSNAFGFDEARNQMFWFYKGDKTGGPNLAGLYYWDQVTGAIDRIASQEQSWTNQRFPLNADFYPDPSTGNSYFVWVTGGGSTVNFLPITYDVSDNPIGVGSRIQRTITGPDFSPDSMNFGDIAIKTSTDTLYLATALEGGFAKIDLDDAFEQPTLPYTEITRGNPPLQVAFDCEEEILYGQQLIRPNNNFSDNWYTIDLETGVATSIPDYSTTGRLSAFDLGGSACSASPQTTSHTHSSSHVVGTNALPESHCLPNHESYWQPDSGTDLDSDSISNNYAHPESHFSLTILP 336
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|553193193|ref|XP_005855729.1| (hypothetical protein NGA_0661400 [Nannochloropsis gaditana CCMP526] >gi|422293331|gb|EKU20631.1| hypothetical protein NGA_0661400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 426.787 bits (1096), Expect = 1.027e-144 Identity = 212/295 (71.86%), Postives = 245/295 (83.05%), Query Frame = 0
Query: 1 MLCTKMRTKP-LFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTG-RLSALDLGGSACSASPQT 293
MLC KMRT+P L FLVG+LALS SAAPAFMYGID NEI++YDPVNK+TR+V++T L + +GSNAFAFDE RNQMFWLY+GD + N AGLYYWDQVTG IDRI+SQAQ+WDNQRFP NA +YRDPSTG SYFVW+T+GGSTVNFLPITYD SGNP GV +IQR I+GP FSP FM FGDIA++TST LYLAT + G+F+KIDL +AF Q LPYTEIKTGN LQ+AFDCEE ILYGQ+ V +T T SDNWYTI+L TGV T+IP+YST G RLSA DLGGS+C+ SP T
Sbjct: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDAT---NPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLAT-SNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYV-ATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLT 290
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|585104943|gb|EWM23750.1| (hypothetical protein Naga_101493g1 [Nannochloropsis gaditana]) HSP 1 Score: 428.328 bits (1100), Expect = 5.011e-143 Identity = 213/297 (71.72%), Postives = 246/297 (82.83%), Query Frame = 0
Query: 1 MLCTKMRTKP-LFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTG-RLSALDLGGSACSASPQTTS 295
MLC KMRT+P L FLVG+LALS SAAPAFMYGID NEI++YDPVNK+TR+V++T L + +GSNAFAFDE RNQMFWLY+GD + N AGLYYWDQVTG IDRI+SQAQ+WDNQRFP NA +YRDPSTG SYFVW+T+GGSTVNFLPITYD SGNP GV +IQR I+GP FSP FM FGDIA++TST LYLAT + G+F+KIDL +AF Q LPYTEIKTGN LQ+AFDCEE ILYGQ+ V +T T SDNWYTI+L TGV T+IP+YST G RLSA DLGGS+C+ SP T S
Sbjct: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDAT---NPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLAT-SNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYV-ATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTAS 292
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|585099547|gb|EWM20154.1| (hypothetical protein Naga_101486g1 [Nannochloropsis gaditana]) HSP 1 Score: 424.861 bits (1091), Expect = 1.734e-141 Identity = 214/299 (71.57%), Postives = 244/299 (81.61%), Query Frame = 0
Query: 1 MLCTKMRTKP-LFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATG--TGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTG-RLSALDLGGSACSASPQTTS 295
MLC KMRT+P L FLVG+LALS SAAPAFMYGID NEIV+YDPVNKVTR++++T L + +GSNAFAFD RNQMFWLY+GD + N AGLYYWDQVTG IDRI+SQAQ+WDNQRFP NA +YRDPSTG SYFVW+T+ GSTVNFLPITYD SGNP GV +IQR I+GP FSP FM FGDIAI+TST LYLAT + G+F+KIDL +AF Q LPYTEIKTGN LQ+AFDCEE ILYGQQ V +T T SDNWYTI+L TGV T+IP+YST G RLSA DLGGS+C+ SP T S
Sbjct: 1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIVQYDPVNKVTRLIQDTGLTKFQGSNAFAFDGVRNQMFWLYQGDAT---NPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITERGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAIQTSTKQLYLATNEFSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQQYV-ATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTAS 295
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|553191383|ref|XP_005855371.1| (hypothetical protein NGA_0118200 [Nannochloropsis gaditana CCMP526] >gi|422293689|gb|EKU20989.1| hypothetical protein NGA_0118200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 121.324 bits (303), Expect = 2.477e-29 Identity = 64/81 (79.01%), Postives = 67/81 (82.72%), Query Frame = 0
Query: 178 MTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTI 258
M FGDIAIKTSTDMLYLAT G+FAKIDLDDAFEQPTLPYTEIKTGN LQ+AFDCEEEILYGQ + TV DNW TI
Sbjct: 1 MRFGDIAIKTSTDMLYLAT-VFGQFAKIDLDDAFEQPTLPYTEIKTGNPSLQLAFDCEEEILYGQAFDSADVTV-DNWPTI 79 The following BLAST results are available for this feature:
BLAST of EWM22905.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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