EWM22905.1, cds7767 (CDS) Nannochloropsis gaditana

Overview
NameEWM22905.1
Unique Namecds7767
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:387633..388516 -
Alignment locationCM002473.1:387128..387256 -
Alignment locationCM002473.1:386953..387021 -
Alignment locationCM002473.1:386277..386613 -
Alignment locationCM002473.1:386046..386153 -
Alignment locationCM002473.1:385895..385951 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22905.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100764g3.10536.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:387633..388516 -
CM002473.1supercontigCM002473.1:387128..387256 -
CM002473.1supercontigCM002473.1:386953..387021 -
CM002473.1supercontigCM002473.1:386277..386613 -
CM002473.1supercontigCM002473.1:386046..386153 -
CM002473.1supercontigCM002473.1:385895..385951 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR011044Quino_amine_DH_bsu
Homology
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|585103581|gb|EWM22905.1| (hypothetical protein Naga_100764g3 [Nannochloropsis gaditana])

HSP 1 Score: 1090.49 bits (2819), Expect = 0.000e+0
Identity = 527/527 (100.00%), Postives = 527/527 (100.00%), Query Frame = 0
Query:    1 MLCTKMRTKPLFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTGRLSALDLGGSACSASPQTTSSHVVGTNALPESHCLPNHESYRQPDSGTDIGSDSTSNNYTNPESDFPLTILPGVRFAKHCLQGYWSCAIQIPEPGSTTFPLLPPCDPRFKYKQAARKRVVIRARKPKTTLSTRIRVTTYNKRSLPNIFLDLPFGIEFVSAKGPSAKTADIQVDDFADEIFFLTSPLQKSKRVVSYKVKINVTEEFEDDTFNIDYGLFDGSIANATCRTEFPPLQVSVIRKGETTKMKKGKSM 527
            MLCTKMRTKPLFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTGRLSALDLGGSACSASPQTTSSHVVGTNALPESHCLPNHESYRQPDSGTDIGSDSTSNNYTNPESDFPLTILPGVRFAKHCLQGYWSCAIQIPEPGSTTFPLLPPCDPRFKYKQAARKRVVIRARKPKTTLSTRIRVTTYNKRSLPNIFLDLPFGIEFVSAKGPSAKTADIQVDDFADEIFFLTSPLQKSKRVVSYKVKINVTEEFEDDTFNIDYGLFDGSIANATCRTEFPPLQVSVIRKGETTKMKKGKSM
Sbjct:    1 MLCTKMRTKPLFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTGRLSALDLGGSACSASPQTTSSHVVGTNALPESHCLPNHESYRQPDSGTDIGSDSTSNNYTNPESDFPLTILPGVRFAKHCLQGYWSCAIQIPEPGSTTFPLLPPCDPRFKYKQAARKRVVIRARKPKTTLSTRIRVTTYNKRSLPNIFLDLPFGIEFVSAKGPSAKTADIQVDDFADEIFFLTSPLQKSKRVVSYKVKINVTEEFEDDTFNIDYGLFDGSIANATCRTEFPPLQVSVIRKGETTKMKKGKSM 527          
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|553177379|ref|XP_005852464.1| (hypothetical protein NGA_0695300 [Nannochloropsis gaditana CCMP526] >gi|422296069|gb|EKU23368.1| hypothetical protein NGA_0695300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 278/336 (82.74%), Postives = 293/336 (87.20%), Query Frame = 0
Query:   17 LLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTGRLSALDLGGSACSASPQ-----TTSSHVVGTNALPESHCLPNHESYRQPDSGTDIGSDSTSNNYTNPESDFPLTILP 347
            +LA+SITSAAPAFMYGID FNEI+EYDPVNKVTRVV+ETDLN+R GSNAF FDE RNQMFW Y+GDK+GGPNLAGLYYWDQVTGAIDRI+SQ QSW NQRFP NA FY DPSTGNSYFVWVT GGSTVNFLPITYD+S NPIGV + IQR ITGPDFSPD M FGDIAIKTSTD LYLAT   G FAKIDLDDAFEQPTLPYTEI  GN PLQ+AFDCEEEILYGQQL+R     SDNWYTIDLETGVATSIPDYSTTGRLSA DLGGSACSASPQ      +SSHVVGTNALPESHCLPNHESY QPDSGTD+ SDS SNNY +PES F LTILP
Sbjct:    1 MLAVSITSAAPAFMYGIDSFNEIIEYDPVNKVTRVVKETDLNKRSGSNAFGFDEARNQMFWFYKGDKTGGPNLAGLYYWDQVTGAIDRIASQEQSWTNQRFPLNADFYPDPSTGNSYFVWVTGGGSTVNFLPITYDVSDNPIGVGSRIQRTITGPDFSPDSMNFGDIAIKTSTDTLYLATALEGGFAKIDLDDAFEQPTLPYTEITRGNPPLQVAFDCEEEILYGQQLIRPNNNFSDNWYTIDLETGVATSIPDYSTTGRLSAFDLGGSACSASPQTTSHTHSSSHVVGTNALPESHCLPNHESYWQPDSGTDLDSDSISNNYAHPESHFSLTILP 336          
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|553193193|ref|XP_005855729.1| (hypothetical protein NGA_0661400 [Nannochloropsis gaditana CCMP526] >gi|422293331|gb|EKU20631.1| hypothetical protein NGA_0661400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 426.787 bits (1096), Expect = 1.027e-144
Identity = 212/295 (71.86%), Postives = 245/295 (83.05%), Query Frame = 0
Query:    1 MLCTKMRTKP-LFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTG-RLSALDLGGSACSASPQT 293
            MLC KMRT+P L FLVG+LALS  SAAPAFMYGID  NEI++YDPVNK+TR+V++T L + +GSNAFAFDE RNQMFWLY+GD +   N AGLYYWDQVTG IDRI+SQAQ+WDNQRFP NA +YRDPSTG SYFVW+T+GGSTVNFLPITYD SGNP GV  +IQR I+GP FSP FM FGDIA++TST  LYLAT + G+F+KIDL +AF Q  LPYTEIKTGN  LQ+AFDCEE ILYGQ+ V +T T SDNWYTI+L TGV T+IP+YST G RLSA DLGGS+C+ SP T
Sbjct:    1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDAT---NPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLAT-SNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYV-ATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLT 290          
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|585104943|gb|EWM23750.1| (hypothetical protein Naga_101493g1 [Nannochloropsis gaditana])

HSP 1 Score: 428.328 bits (1100), Expect = 5.011e-143
Identity = 213/297 (71.72%), Postives = 246/297 (82.83%), Query Frame = 0
Query:    1 MLCTKMRTKP-LFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTG-RLSALDLGGSACSASPQTTS 295
            MLC KMRT+P L FLVG+LALS  SAAPAFMYGID  NEI++YDPVNK+TR+V++T L + +GSNAFAFDE RNQMFWLY+GD +   N AGLYYWDQVTG IDRI+SQAQ+WDNQRFP NA +YRDPSTG SYFVW+T+GGSTVNFLPITYD SGNP GV  +IQR I+GP FSP FM FGDIA++TST  LYLAT + G+F+KIDL +AF Q  LPYTEIKTGN  LQ+AFDCEE ILYGQ+ V +T T SDNWYTI+L TGV T+IP+YST G RLSA DLGGS+C+ SP T S
Sbjct:    1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIIQYDPVNKMTRLVQDTGLTKFQGSNAFAFDEVRNQMFWLYQGDAT---NPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITEGGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAVQTSTKQLYLAT-SNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQRYV-ATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTAS 292          
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|585099547|gb|EWM20154.1| (hypothetical protein Naga_101486g1 [Nannochloropsis gaditana])

HSP 1 Score: 424.861 bits (1091), Expect = 1.734e-141
Identity = 214/299 (71.57%), Postives = 244/299 (81.61%), Query Frame = 0
Query:    1 MLCTKMRTKP-LFFLVGLLALSITSAAPAFMYGIDGFNEIVEYDPVNKVTRVVEETDLNRREGSNAFAFDETRNQMFWLYRGDKSGGPNLAGLYYWDQVTGAIDRISSQAQSWDNQRFPQNAAFYRDPSTGNSYFVWVTQGGSTVNFLPITYDISGNPIGVETNIQRIITGPDFSPDFMTFGDIAIKTSTDMLYLATG--TGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTIDLETGVATSIPDYSTTG-RLSALDLGGSACSASPQTTS 295
            MLC KMRT+P L FLVG+LALS  SAAPAFMYGID  NEIV+YDPVNKVTR++++T L + +GSNAFAFD  RNQMFWLY+GD +   N AGLYYWDQVTG IDRI+SQAQ+WDNQRFP NA +YRDPSTG SYFVW+T+ GSTVNFLPITYD SGNP GV  +IQR I+GP FSP FM FGDIAI+TST  LYLAT   + G+F+KIDL +AF Q  LPYTEIKTGN  LQ+AFDCEE ILYGQQ V +T T SDNWYTI+L TGV T+IP+YST G RLSA DLGGS+C+ SP T S
Sbjct:    1 MLCPKMRTRPFLLFLVGMLALSTASAAPAFMYGIDDNNEIVQYDPVNKVTRLIQDTGLTKFQGSNAFAFDGVRNQMFWLYQGDAT---NPAGLYYWDQVTGTIDRIASQAQTWDNQRFPANAVYYRDPSTGISYFVWITERGSTVNFLPITYDASGNPTGVGADIQRTISGPSFSPSFMRFGDIAIQTSTKQLYLATNEFSNGRFSKIDLTNAFGQALLPYTEIKTGNPSLQLAFDCEENILYGQQYV-ATDTGSDNWYTINLATGVTTTIPNYSTEGARLSARDLGGSSCTDSPLTAS 295          
BLAST of EWM22905.1 vs. NCBI_GenBank
Match: gi|553191383|ref|XP_005855371.1| (hypothetical protein NGA_0118200 [Nannochloropsis gaditana CCMP526] >gi|422293689|gb|EKU20989.1| hypothetical protein NGA_0118200 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 121.324 bits (303), Expect = 2.477e-29
Identity = 64/81 (79.01%), Postives = 67/81 (82.72%), Query Frame = 0
Query:  178 MTFGDIAIKTSTDMLYLATGTGGKFAKIDLDDAFEQPTLPYTEIKTGNLPLQIAFDCEEEILYGQQLVRSTTTVSDNWYTI 258
            M FGDIAIKTSTDMLYLAT   G+FAKIDLDDAFEQPTLPYTEIKTGN  LQ+AFDCEEEILYGQ    +  TV DNW TI
Sbjct:    1 MRFGDIAIKTSTDMLYLAT-VFGQFAKIDLDDAFEQPTLPYTEIKTGNPSLQLAFDCEEEILYGQAFDSADVTV-DNWPTI 79          
The following BLAST results are available for this feature:
BLAST of EWM22905.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 6
Match NameE-valueIdentityDescription
gi|585103581|gb|EWM22905.1|0.000e+0100.00hypothetical protein Naga_100764g3 [Nannochloropsi... [more]
gi|553177379|ref|XP_005852464.1|0.000e+082.74hypothetical protein NGA_0695300 [Nannochloropsis ... [more]
gi|553193193|ref|XP_005855729.1|1.027e-14471.86hypothetical protein NGA_0661400 [Nannochloropsis ... [more]
gi|585104943|gb|EWM23750.1|5.011e-14371.72hypothetical protein Naga_101493g1 [Nannochloropsi... [more]
gi|585099547|gb|EWM20154.1|1.734e-14171.57hypothetical protein Naga_101486g1 [Nannochloropsi... [more]
gi|553191383|ref|XP_005855371.1|2.477e-2979.01hypothetical protein NGA_0118200 [Nannochloropsis ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7788rna7788Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications