EWM22930.1, cds7743 (CDS) Nannochloropsis gaditana

Overview
NameEWM22930.1
Unique Namecds7743
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:304581..305561 +

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Properties
Property NameValue
Protein idEWM22930.1
Productputative domain XH
Orig transcript idgnl|cribi|Naga_101151g1.1522.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:304581..305561 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR005379Uncharacterised_XH
Homology
[Close]
BLAST of EWM22930.1 vs. NCBI_GenBank
Match: gi|585103647|gb|EWM22930.1| (putative domain XH [Nannochloropsis gaditana])

HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0 
Query:    1 MAAAPNPEPIFHGDEAQAQGGREGGREVTSVVEARAEIARLEGLVRRLRREAEENDHGELINRLVSVEADRTRELNAVKAVLLQTGQNYPDVVRTKWMCEATETEVAAALRANGSSRNGSSSNSGLSNGSGRRGLRSREEGGAREGREGLDEEGGSSLPPSLPSSTSLTADACDRVSDVFQSHQSSPRDPYQPGHARAASSHSNSNSNSNSNISAHLTDEGFRRVMTRIDATIRDASFDPLMRQEGRIVGVDWDHMVLRNLQEEYGRAMAELVVAKKKEVERYCPSGSYPVLVLWAGEEGRGGGREGRARGGSCGCWRWWCASCLP 326
            MAAAPNPEPIFHGDEAQAQGGREGGREVTSVVEARAEIARLEGLVRRLRREAEENDHGELINRLVSVEADRTRELNAVKAVLLQTGQNYPDVVRTKWMCEATETEVAAALRANGSSRNGSSSNSGLSNGSGRRGLRSREEGGAREGREGLDEEGGSSLPPSLPSSTSLTADACDRVSDVFQSHQSSPRDPYQPGHARAASSHSNSNSNSNSNISAHLTDEGFRRVMTRIDATIRDASFDPLMRQEGRIVGVDWDHMVLRNLQEEYGRAMAELVVAKKKEVERYCPSGSYPVLVLWAGEEGRGGGREGRARGGSCGCWRWWCASCLP
Sbjct:    1 MAAAPNPEPIFHGDEAQAQGGREGGREVTSVVEARAEIARLEGLVRRLRREAEENDHGELINRLVSVEADRTRELNAVKAVLLQTGQNYPDVVRTKWMCEATETEVAAALRANGSSRNGSSSNSGLSNGSGRRGLRSREEGGAREGREGLDEEGGSSLPPSLPSSTSLTADACDRVSDVFQSHQSSPRDPYQPGHARAASSHSNSNSNSNSNISAHLTDEGFRRVMTRIDATIRDASFDPLMRQEGRIVGVDWDHMVLRNLQEEYGRAMAELVVAKKKEVERYCPSGSYPVLVLWAGEEGRGGGREGRARGGSCGCWRWWCASCLP 326
[Close]
BLAST of EWM22930.1 vs. NCBI_GenBank
Match: gi|585105761|gb|EWM24364.1| (putative domain XH [Nannochloropsis gaditana])

HSP 1 Score: 92.8189 bits (229), Expect = 1.872e-18
Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = 0 
Query:  224 RVMTRIDATIRDASFDPLMRQEGRIVGVDWDHMVLRNLQEEYGRAMAELVVAKKKEVERYCPSGSYPVLVLWAGEEGR 301
            R +  +D+ +RDA+FDP  RQ GRI+G +  H +L +L EE+G AMA+LVV KK+E+E++CPSG YP  VLW  +EG+
Sbjct:  134 RALDAVDSLVRDATFDPFHRQHGRIIGTNHSHKLLLSLCEEWGPAMADLVVLKKEEIEKFCPSGHYPTPVLW--KEGK 209
The following BLAST results are available for this feature:
BLAST of EWM22930.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585103647|gb|EWM22930.1|0.000e+0100.00putative domain XH [Nannochloropsis gaditana][more]
gi|585105761|gb|EWM24364.1|1.872e-1852.56putative domain XH [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7764rna7764Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications