EWM22934.1, cds7738 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22934.1 vs. NCBI_GenBank
Match: gi|585103653|gb|EWM22934.1| (protein of unknown function DUF4168 [Nannochloropsis gaditana]) HSP 1 Score: 1031.94 bits (2667), Expect = 0.000e+0 Identity = 503/503 (100.00%), Postives = 503/503 (100.00%), Query Frame = 0 Query: 1 MTNKGSSPNSFFPAGRLPLPSVLVFVLFLLSSLFSVQDVRATPSNKVKFVSLLANDAVLDRYAAAVAATEPLREDRDRALRDNINPLHLWWVKTTKKNVLEAHKSGPRAEAIRRACTYHVTQSSRIIKSLGLSVADFNLITRRLAHDAVLRKKASRRPKKWSGEGEEEKSRMARRRRWWGGRGRQGGEEEGEEEQELPVPTNVLPHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPGATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWRRQACWGQGGCSIGPARKGIATTGERECLSLFFLIKGEAGTRRNGNLCMLYHLPAIECLSSPTLRKNSATEYTKKSAMLGVPSSIAGMAKGVAVNGKRGVSAIKPTLQTSSPSLVQRQHRRIRPLWQHQLRQLATETTHATPVPPPPPSHRNRVYPAVLLVTFAAVVYVIMTPDDEDIDSKILQAVQARLPAEVPPEELSTAETSKER 503 MTNKGSSPNSFFPAGRLPLPSVLVFVLFLLSSLFSVQDVRATPSNKVKFVSLLANDAVLDRYAAAVAATEPLREDRDRALRDNINPLHLWWVKTTKKNVLEAHKSGPRAEAIRRACTYHVTQSSRIIKSLGLSVADFNLITRRLAHDAVLRKKASRRPKKWSGEGEEEKSRMARRRRWWGGRGRQGGEEEGEEEQELPVPTNVLPHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPGATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWRRQACWGQGGCSIGPARKGIATTGERECLSLFFLIKGEAGTRRNGNLCMLYHLPAIECLSSPTLRKNSATEYTKKSAMLGVPSSIAGMAKGVAVNGKRGVSAIKPTLQTSSPSLVQRQHRRIRPLWQHQLRQLATETTHATPVPPPPPSHRNRVYPAVLLVTFAAVVYVIMTPDDEDIDSKILQAVQARLPAEVPPEELSTAETSKER Sbjct: 1 MTNKGSSPNSFFPAGRLPLPSVLVFVLFLLSSLFSVQDVRATPSNKVKFVSLLANDAVLDRYAAAVAATEPLREDRDRALRDNINPLHLWWVKTTKKNVLEAHKSGPRAEAIRRACTYHVTQSSRIIKSLGLSVADFNLITRRLAHDAVLRKKASRRPKKWSGEGEEEKSRMARRRRWWGGRGRQGGEEEGEEEQELPVPTNVLPHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPGATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWRRQACWGQGGCSIGPARKGIATTGERECLSLFFLIKGEAGTRRNGNLCMLYHLPAIECLSSPTLRKNSATEYTKKSAMLGVPSSIAGMAKGVAVNGKRGVSAIKPTLQTSSPSLVQRQHRRIRPLWQHQLRQLATETTHATPVPPPPPSHRNRVYPAVLLVTFAAVVYVIMTPDDEDIDSKILQAVQARLPAEVPPEELSTAETSKER 503
BLAST of EWM22934.1 vs. NCBI_GenBank
Match: gi|397643180|gb|EJK75698.1| (hypothetical protein THAOC_02571 [Thalassiosira oceanica]) HSP 1 Score: 120.553 bits (301), Expect = 1.550e-26 Identity = 82/247 (33.20%), Postives = 125/247 (50.61%), Query Frame = 0 Query: 60 DRYAAAVAATEPLREDRDRAL--------RDNINPLHLWWVKTTKKNVLEAHKSGPRAEAIRRACTYHVTQSSRIIKSLGLSVADFNLITRRLAHDAVLRKKASRRPKKWSGEGEEEKSRMARRRRWWGGRGRQGGEEEGEEEQELPVPTNVLPHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPG--ATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWR 296 DRY+AA+A TE LR RDR + R N L W +T KK RA + ++ QS++ +K+LG++ A FN I R + D L+ + S + + ++ + Q E + HR+ LFA+S+ EIE LR++Q LKQ V+ PPG +DP++ P+L+ +V+ +C +FPVQAEEI ++ G + EFN +L +T+ NP FRWR Sbjct: 128 DRYSAALAVTEGLRRVRDREITRAEEAKRRKKRNQLSTDW-ETAKK----------------RAESAYLLQSTKAVKALGMTAAQFNQIGREVISDPALKDRVSEQAYLYRVASTVNLDKVPLLDDPSSKKLLQSAEHK--------------KHRVQLFARSIHEIEDLRSDQMEALKQSLQVERFPPGFDISDPNVQPLLHPEVRAVCEKFPVQAEEIVKRYGLGSDEFNRMLEETKGNPIFRWR 343
BLAST of EWM22934.1 vs. NCBI_GenBank
Match: gi|219110315|ref|XP_002176909.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411444|gb|EEC51372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 115.161 bits (287), Expect = 4.657e-25 Identity = 82/255 (32.16%), Postives = 127/255 (49.80%), Query Frame = 0 Query: 51 SLLANDAV-LDRYAAAVAATEPLREDRDRALRDNINPLHLWWVKTTKKNVLEAHKSGPRAEAIRRACTYHVTQSSRIIKSLGLSVADFNLITRRLAHDAVLRKKASRRPKKWSGEGEEEKSRMARRRRWWGGRGRQGGEEEGEEEQELPVPTNVL----PHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPGA--TDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWRRQ 298 SL +N + D+Y+A +AATE LR RDR+L + T ++ EA K +V S R++++LG++VA+FN + R+++ D L++K + + RMA R E+ P +L +L LF +S+ EIE LR++Q LK+ HVD P +DP L P L+ KV+ + FP+QAE+I +K+G ++ EFN +L T NP FRW+ Q Sbjct: 71 SLFSNSELEYDKYSACLAATEGLRRIRDRSLAAEVQA-----AGGTGTDMKEAEK---------HINAQYVQNSGRVLRALGMTVAEFNALGRQISQDEQLKEKVMEQAYLY---------RMAATINM----DRANLIED-------PASAELLQAFRKDKLHLFCESMSEIEQLRSDQIERLKRSLHVDKFPANVNISDPGLLPFLSPKVRAVVEAFPLQAEDIVKKHGLQSDEFNQMLQATHSNPIFRWKIQ 291
BLAST of EWM22934.1 vs. NCBI_GenBank
Match: gi|224010673|ref|XP_002294294.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970311|gb|EED88649.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 115.931 bits (289), Expect = 1.712e-24 Identity = 78/245 (31.84%), Postives = 128/245 (52.24%), Query Frame = 0 Query: 60 DRYAAAVAATEPLREDRDRALRDNINPLHLWWVKTTKKNVLEAHKSGPRAEAI----RRACTYHVTQSSRIIKSLGLSVADFNLITRRLAHDAVLRKKASRRPKKWSGEGEEEKSRMARRRRWWGGRGRQGGEEEGEEEQELPVPTNVLPHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPG--ATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWRRQ 298 DRYAAA+A TE LR RD + + +K+ N G +A+ I +RA + + Q+++ +K+LG++V FN I R + D L+++ S + + R+ + Q + +R+ +FA+S+ EIE LRA+Q L+Q V+ PPG +DP++ P+L+ +V+ +C +FP+QAEEI ++ G E+ EFN +L +T+ NP FRWR Q Sbjct: 183 DRYAAALAVTEGLRRVRDAEVERRMEE-----IKSGDNNSNRGSGGGGKAQQIEQAKKRAESAFLMQNTKAVKALGMTVTQFNQIGREVLADNALKERVSEQAYLYRIASTINLERVPLLSDPSSKKLLQSHKR----------------YRVQMFARSITEIEDLRADQMEALRQSLAVERFPPGFDLSDPNVQPLLHPEVRAVCEKFPLQAEEIVKRYGLESDEFNKMLEETKGNPIFRWRVQ 406
BLAST of EWM22934.1 vs. NCBI_GenBank
Match: gi|298713767|emb|CBJ33734.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.1073 bits (196), Expect = 1.163e-13 Identity = 40/96 (41.67%), Postives = 54/96 (56.25%), Query Frame = 0 Query: 205 PHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPGATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWRRQAC 300 P + LFAKSLREIEALR+ Q L +E + LP G P + I + +++ C FPV AE I + NG E EFN L ++ N +RW+ C Sbjct: 97 PDKKMLFAKSLREIEALRSRQRRRLMKEVGSNDLPSGLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRC 192 The following BLAST results are available for this feature:
BLAST of EWM22934.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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