EWM22948.1, cds7725 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|585103680|gb|EWM22948.1| (hypothetical protein Naga_100396g5 [Nannochloropsis gaditana]) HSP 1 Score: 931.398 bits (2406), Expect = 0.000e+0 Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0
Query: 1 MDFLFTVLIYASCYLEIPLRGWLCGMPHPPGGDRTPCTGKGRSTVLIAGVLCVVVYVAIIHPYSVPSLGSVVARPQYEALRQAGGSAGGGGRGVYTDCLNTDTLLLTPTKPAHHAENDSVVDPTRRTSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVRACRYTLEEPAGSPFPYPEALVEDRGRRRTGLRGFWG 452
MDFLFTVLIYASCYLEIPLRGWLCGMPHPPGGDRTPCTGKGRSTVLIAGVLCVVVYVAIIHPYSVPSLGSVVARPQYEALRQAGGSAGGGGRGVYTDCLNTDTLLLTPTKPAHHAENDSVVDPTRRTSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVRACRYTLEEPAGSPFPYPEALVEDRGRRRTGLRGFWG
Sbjct: 1 MDFLFTVLIYASCYLEIPLRGWLCGMPHPPGGDRTPCTGKGRSTVLIAGVLCVVVYVAIIHPYSVPSLGSVVARPQYEALRQAGGSAGGGGRGVYTDCLNTDTLLLTPTKPAHHAENDSVVDPTRRTSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVRACRYTLEEPAGSPFPYPEALVEDRGRRRTGLRGFWG 452
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|544215241|ref|XP_005537766.1| (hypothetical protein CYME_CMP077C [Cyanidioschyzon merolae strain 10D] >gi|449018328|dbj|BAM81730.1| hypothetical protein CYME_CMP077C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 135.576 bits (340), Expect = 3.032e-32 Identity = 96/307 (31.27%), Postives = 139/307 (45.28%), Query Frame = 0
Query: 133 LLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAV--VFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRF---VAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQ-ERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVR-ACRYTLE----EPAGS 428
+L +++ GF RLL + +H +VV G DPS+L+ + +R +P + R+++ +G WN + YML V W LL N D+ +PPG+L ++ E Q+P+FC G + + +R Q G FDENI+PAYYED E +R + E +P R F V T HHG S +Y SGT + ++ G R + Q DR + YV+ KW C E+C HPF W D R C+ E + CRY + EPA S
Sbjct: 61 MLCFGAEFEHHGFTTRLLAS-IDEPVKHVVVVLAGEDPSILELEQTIRQDYPFCTIIRKKQRIGNVGIWNTCMRYMLDVAKVPWALLLNNDIMMPPGSLGNVSVEA-QRVVQNPEFCLGPTKLRNVRKMLWSALVVSRRTAQIAGFFDENIFPAYYEDNEFSIRIRKIHESGTPCRLFPVRVRNTFHHGPADSPDYISGTVI---YYNGGGDRSKKVIQ------------DRANAWNPHYVALKWDCPLYLWEKCKNMHPFGRSDLSPKDWAFDPGYRHCLETGESGGQFGCRYNVSVLPREPASS 350
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|545710685|ref|XP_005707650.1| (hypothetical protein Gasu_16270 [Galdieria sulphuraria] >gi|452824125|gb|EME31130.1| hypothetical protein Gasu_16270 [Galdieria sulphuraria]) HSP 1 Score: 132.88 bits (333), Expect = 3.145e-31 Identity = 93/305 (30.49%), Postives = 140/305 (45.90%), Query Frame = 0
Query: 127 TSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFF---NVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRH---NRSLECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCD-AEQERCLFAHPFNNPQHPLSYWRLDWARRECI-LRQERRVRACRYTLE 423
+++ IP L T+L+++ F RL++ + +H +VV G D S + ++ F V + E +G G+N L YM W L+ N DVY P G+L +L + +DP C GF N+ G F T +Q G FDEN++PAYY+D E+D+R NR+ + + + +HHG Y SGT++ D + +S R +R RG ++ +YV+ KWGC + C + PFN L WR D R CI + R C Y LE
Sbjct: 60 SNQSIPFLCTSLEFNHHNFTERLINS-VDYPTKHFVVVVAGFDSSARQIARWIAENFKQVKIVWESSRIGGTGGFNICLRYMHEFYRERWGLIVNNDVYFPSGSLKSLKYQTELTLLEDPHLCLGFVSFRNMHFGYSG--FVATSRLVQYAGYFDENLFPAYYDDNELDIRLREVNRNDDVCTRHDIVFSNGIHHGIEDQQGYLSGTAIYLD--------EHENSSFRDAQR-------RGSRNNPVYVAEKWGCQGTDWNSCSYKRPFNKSYLSLKDWRFDPVYRICIEYGKFARHDRCTYDLE 346
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971512372|dbj|GAQ85850.1| (hypothetical protein KFL_002570180 [Klebsormidium nitens]) HSP 1 Score: 75.0998 bits (183), Expect = 8.117e-11 Identity = 81/293 (27.65%), Postives = 129/293 (44.03%), Query Frame = 0
Query: 129 RPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGC------DPSMLKAVEYVRSQFPD--VAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRR--FVAATLHHGRLGS--AEYKSGTSVL---RDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRL----YVSAKWGCD-AEQERCLFAHPFNNPQHPLSYWRLD 401
RPIP++ T + + +L RL+ + R ++ G D S+ A+E + + P ++V +G GWN ++ L D W LL + DV PGAL + +E+ +DPQ + F + + FA R L +G +DEN++P+YY+D E R R+ T +R ++ + GR A G+ +L D W +EG + + LR R + + GF S R Y + W EQ + PFNNP+ + W LD
Sbjct: 128 RPIPVVGTPV-LNNGHWLKRLVYS-IDVPVRMIQIIVGTMPGSKTMDTSVRDALEELNQRLPPGFLSVVDMGCNMGSGGGWNAVFEHNL---DAPWYLLVSGDVAFAPGALARIPDEL-----EDPQNEKIFAFMYS--QFRFFALRREALDLVGVWDENMWPSYYDDNEYQARMERAQALTPGVQRICYIGEPMPDGRRFDEPAHIHGGSELLGPYADVWLEEGAERISGA-LRAEPRLAARKGPSGFNSLRFMMNKYNFSYWEMKPKEQLEISWRLPFNNPERGIPRWVLD 407
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971511909|dbj|GAQ86300.1| (hypothetical protein KFL_002810080 [Klebsormidium nitens]) HSP 1 Score: 69.3218 bits (168), Expect = 3.171e-9 Identity = 65/223 (29.15%), Postives = 86/223 (38.57%), Query Frame = 0
Query: 188 VFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSP-PRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAE----QERCLFAHPFNNPQHPLSYWRLDWARR 405
V R GCA GWN + W L+ N D PGAL TL + V D GF VF T+ + +G FDENI+PAY ED + DLR S +P P F +H G E + +S++ G P D R ++R+Y KW ++ Q +F P NP L+ W D A R
Sbjct: 146 VIRSGCNRGCAGGWNSIIHST---SSAPWWLVINDDAAFTPGALRTLHDYVSGTPDVAVYKLTGF---------QVFVLTQLAVAKVGVFDENIWPAYAEDCDYDLRIQLSGVLVAPRPPEFT--NIH----GDPESGASSSLV----TSRGGGHP----------DYGRRNQCSHTNNRMYYQKKWNLSSQSCGKQLEGMFLTPHGNPSRSLASWTFDEALR 336
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971519809|dbj|GAQ78373.1| (hypothetical protein KFL_000120210 [Klebsormidium nitens]) HSP 1 Score: 68.9366 bits (167), Expect = 6.578e-9 Identity = 71/229 (31.00%), Postives = 92/229 (40.17%), Query Frame = 0
Query: 196 GCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRS-LECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKW-----GCDAEQERCLFAHPFNNPQHPLSYWRLDW---ARRECILRQERRV 415
GCA GWN + L D W L+ N D PGAL TL + V +P F+ +TA VF T+ + +G FDENI+PAY ED + DLR S + S P F + +H G E S +S++ G Q K ++R+Y KW GC Q +F P NP L W D AR E RV
Sbjct: 196 GCAGGWNTIVHSTL---DSPWWLIINDDAAFVPGALRTLYDYV----SSNPNVA--FYKLTA---YQVFIITQRAVAEVGVFDENIWPAYVEDCDYDLRLKLSGVMVASRPPEF--SNIH----GDPESGSSSSLI----DTRGGGHSGYGQRSKCSHS----------NNRIYYQKKWNLSVPGC-GRQLEGMFQTPHGNPSRNLDSWTFDEEVRARSESCWEPSNRV 391
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971515240|dbj|GAQ82940.1| (hypothetical protein KFL_001300030 [Klebsormidium nitens]) HSP 1 Score: 67.781 bits (164), Expect = 1.562e-8 Identity = 64/212 (30.19%), Postives = 87/212 (41.04%), Query Frame = 0
Query: 196 GCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRS-LECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKW-----GCDAEQERCLFAHPFNNPQHPLSYWRLD 401
GCA GWN + L D W L+ N D PGAL TL + V + D F+ +T VF T+ + +G FDENI+PAY ED + DLR S + S P F + +H G E + +S++ G Q K ++R+Y KW GC Q +F P NP L+ W D
Sbjct: 230 GCAGGWNTIIHSTL---DSPWWLIVNDDAAFVPGALRTLYDYVSSNPDV------AFYKLTT---YQVFLITKRAVTEVGVFDENIWPAYGEDCDYDLRLQLSGVMVASRPPEF--SNIH----GDPESGASSSLI----NTRGGGHSGYGQRSKCSHS----------NNRIYYQKKWNLSVPGC-GRQLEGMFRTPHGNPSRSLASWTFD 408
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971517018|dbj|GAQ81175.1| (hypothetical protein KFL_000730120 [Klebsormidium nitens]) HSP 1 Score: 65.855 bits (159), Expect = 6.049e-8 Identity = 101/402 (25.12%), Postives = 161/402 (40.05%), Query Frame = 0
Query: 48 AGVLCVVVYVAIIHPYSVPSLGSVVARPQYEALRQ-----AGGSAGGGGRGVYTDCLNTDTLLLTPTKPAHHA-ENDSVVDPTRRTS-----RPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVV-----AGGCDPSMLKAVEYVRSQFPDVAVFREREA--LGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRFVA---ATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGF------VSSRLYVS---------AKWGC--DAEQERCLF--AHPFNNPQHPLSYWRLDWARRECIL 409
AGVL V+ + + Y V G +RP +R A G+ G R + + L PA A EN + + + +PIP++ + + E +L R + + +LVV A + M +AV + ++ V E+ LG + WN L D W L + DV P AL +A+EV E Q+ F++ F TR L +G FDENI+P ED+E R R+ + P ++ +A A + +GR+ + H E + R +++ WE D + + F + RL +S AKW D E+++ +F PFNNP+ L W D R ++
Sbjct: 9 AGVLSTVIGIIFVCLYGV---GFSNSRPNSVRIRSSIVEWANGTTGSRDRLLELSSVPHLEELAESIIPALFAPENYQKIRQKFKGNQFLLRKPIPVVGIPVMNNAE-WLRRTIYSIDVPVKKIQLVVNELPSASEENRKMKEAVNDIVTRLGSRFVHVEQPGCNLGVSGSWNTIFAKNL---DAPWFFLASADVAFAPAALGRVADEV--EDPQNKDILIYFYSAMR-----FFVLTRKALDVIGVFDENIWPHPVEDKEYHKRVMRA-QVLQPDKQLMAQIGAEMPNGRIFE-------EIHHVHGNDEVIGRGRGAEI--WEDDDAPKTSGAFRTNPELYAKRLKMSGGNVGAVYRAKWSTLSDEEEKKGIFNWMRPFNNPERELWSWTFDRKLRAILM 386 The following BLAST results are available for this feature:
BLAST of EWM22948.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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