EWM22948.1, cds7725 (CDS) Nannochloropsis gaditana

Overview
NameEWM22948.1
Unique Namecds7725
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:233405..234763 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22948.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100396g5.7446.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:233405..234763 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
Homology
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|585103680|gb|EWM22948.1| (hypothetical protein Naga_100396g5 [Nannochloropsis gaditana])

HSP 1 Score: 931.398 bits (2406), Expect = 0.000e+0
Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0
Query:    1 MDFLFTVLIYASCYLEIPLRGWLCGMPHPPGGDRTPCTGKGRSTVLIAGVLCVVVYVAIIHPYSVPSLGSVVARPQYEALRQAGGSAGGGGRGVYTDCLNTDTLLLTPTKPAHHAENDSVVDPTRRTSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVRACRYTLEEPAGSPFPYPEALVEDRGRRRTGLRGFWG 452
            MDFLFTVLIYASCYLEIPLRGWLCGMPHPPGGDRTPCTGKGRSTVLIAGVLCVVVYVAIIHPYSVPSLGSVVARPQYEALRQAGGSAGGGGRGVYTDCLNTDTLLLTPTKPAHHAENDSVVDPTRRTSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVRACRYTLEEPAGSPFPYPEALVEDRGRRRTGLRGFWG
Sbjct:    1 MDFLFTVLIYASCYLEIPLRGWLCGMPHPPGGDRTPCTGKGRSTVLIAGVLCVVVYVAIIHPYSVPSLGSVVARPQYEALRQAGGSAGGGGRGVYTDCLNTDTLLLTPTKPAHHAENDSVVDPTRRTSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVRACRYTLEEPAGSPFPYPEALVEDRGRRRTGLRGFWG 452          
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|544215241|ref|XP_005537766.1| (hypothetical protein CYME_CMP077C [Cyanidioschyzon merolae strain 10D] >gi|449018328|dbj|BAM81730.1| hypothetical protein CYME_CMP077C [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 135.576 bits (340), Expect = 3.032e-32
Identity = 96/307 (31.27%), Postives = 139/307 (45.28%), Query Frame = 0
Query:  133 LLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAV--VFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRF---VAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAEQ-ERCLFAHPFNNPQHPLSYWRLDWARRECILRQERRVR-ACRYTLE----EPAGS 428
            +L    +++  GF  RLL    +   +H +VV  G DPS+L+  + +R  +P   + R+++ +G    WN  + YML    V W LL N D+ +PPG+L  ++ E      Q+P+FC G   +      +      +R   Q  G FDENI+PAYYED E  +R  +  E  +P R F   V  T HHG   S +Y SGT +   ++   G R  +  Q            DR    +  YV+ KW C     E+C   HPF         W  D   R C+   E   +  CRY +     EPA S
Sbjct:   61 MLCFGAEFEHHGFTTRLLAS-IDEPVKHVVVVLAGEDPSILELEQTIRQDYPFCTIIRKKQRIGNVGIWNTCMRYMLDVAKVPWALLLNNDIMMPPGSLGNVSVEA-QRVVQNPEFCLGPTKLRNVRKMLWSALVVSRRTAQIAGFFDENIFPAYYEDNEFSIRIRKIHESGTPCRLFPVRVRNTFHHGPADSPDYISGTVI---YYNGGGDRSKKVIQ------------DRANAWNPHYVALKWDCPLYLWEKCKNMHPFGRSDLSPKDWAFDPGYRHCLETGESGGQFGCRYNVSVLPREPASS 350          
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|545710685|ref|XP_005707650.1| (hypothetical protein Gasu_16270 [Galdieria sulphuraria] >gi|452824125|gb|EME31130.1| hypothetical protein Gasu_16270 [Galdieria sulphuraria])

HSP 1 Score: 132.88 bits (333), Expect = 3.145e-31
Identity = 93/305 (30.49%), Postives = 140/305 (45.90%), Query Frame = 0
Query:  127 TSRPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGCDPSMLKAVEYVRSQFPDVAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFF---NVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRH---NRSLECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCD-AEQERCLFAHPFNNPQHPLSYWRLDWARRECI-LRQERRVRACRYTLE 423
            +++ IP L T+L+++   F  RL++   +   +H +VV  G D S  +   ++   F  V +  E   +G   G+N  L YM       W L+ N DVY P G+L +L  +      +DP  C GF    N+  G     F  T   +Q  G FDEN++PAYY+D E+D+R    NR+ +  +      +  +HHG      Y SGT++  D        +  +S  R  +R       RG  ++ +YV+ KWGC   +   C +  PFN     L  WR D   R CI   +  R   C Y LE
Sbjct:   60 SNQSIPFLCTSLEFNHHNFTERLINS-VDYPTKHFVVVVAGFDSSARQIARWIAENFKQVKIVWESSRIGGTGGFNICLRYMHEFYRERWGLIVNNDVYFPSGSLKSLKYQTELTLLEDPHLCLGFVSFRNMHFGYSG--FVATSRLVQYAGYFDENLFPAYYDDNELDIRLREVNRNDDVCTRHDIVFSNGIHHGIEDQQGYLSGTAIYLD--------EHENSSFRDAQR-------RGSRNNPVYVAEKWGCQGTDWNSCSYKRPFNKSYLSLKDWRFDPVYRICIEYGKFARHDRCTYDLE 346          
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971512372|dbj|GAQ85850.1| (hypothetical protein KFL_002570180 [Klebsormidium nitens])

HSP 1 Score: 75.0998 bits (183), Expect = 8.117e-11
Identity = 81/293 (27.65%), Postives = 129/293 (44.03%), Query Frame = 0
Query:  129 RPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVVAGGC------DPSMLKAVEYVRSQFPD--VAVFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRR--FVAATLHHGRLGS--AEYKSGTSVL---RDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRL----YVSAKWGCD-AEQERCLFAHPFNNPQHPLSYWRLD 401
            RPIP++ T +  +   +L RL+    +   R   ++ G        D S+  A+E +  + P   ++V      +G   GWN   ++ L   D  W LL + DV   PGAL  + +E+     +DPQ  + F  + +      FA  R  L  +G +DEN++P+YY+D E   R  R+   T   +R  ++   +  GR     A    G+ +L    D W +EG  +   + LR   R  + +   GF S R     Y  + W     EQ    +  PFNNP+  +  W LD
Sbjct:  128 RPIPVVGTPV-LNNGHWLKRLVYS-IDVPVRMIQIIVGTMPGSKTMDTSVRDALEELNQRLPPGFLSVVDMGCNMGSGGGWNAVFEHNL---DAPWYLLVSGDVAFAPGALARIPDEL-----EDPQNEKIFAFMYS--QFRFFALRREALDLVGVWDENMWPSYYDDNEYQARMERAQALTPGVQRICYIGEPMPDGRRFDEPAHIHGGSELLGPYADVWLEEGAERISGA-LRAEPRLAARKGPSGFNSLRFMMNKYNFSYWEMKPKEQLEISWRLPFNNPERGIPRWVLD 407          
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971511909|dbj|GAQ86300.1| (hypothetical protein KFL_002810080 [Klebsormidium nitens])

HSP 1 Score: 69.3218 bits (168), Expect = 3.171e-9
Identity = 65/223 (29.15%), Postives = 86/223 (38.57%), Query Frame = 0
Query:  188 VFREREALGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSP-PRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKWGCDAE----QERCLFAHPFNNPQHPLSYWRLDWARR 405
            V R     GCA GWN  +          W L+ N D    PGAL TL + V    D       GF          VF  T+  +  +G FDENI+PAY ED + DLR   S    +P P  F    +H    G  E  + +S++       G   P          D   R      ++R+Y   KW   ++    Q   +F  P  NP   L+ W  D A R
Sbjct:  146 VIRSGCNRGCAGGWNSIIHST---SSAPWWLVINDDAAFTPGALRTLHDYVSGTPDVAVYKLTGF---------QVFVLTQLAVAKVGVFDENIWPAYAEDCDYDLRIQLSGVLVAPRPPEFT--NIH----GDPESGASSSLV----TSRGGGHP----------DYGRRNQCSHTNNRMYYQKKWNLSSQSCGKQLEGMFLTPHGNPSRSLASWTFDEALR 336          
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971519809|dbj|GAQ78373.1| (hypothetical protein KFL_000120210 [Klebsormidium nitens])

HSP 1 Score: 68.9366 bits (167), Expect = 6.578e-9
Identity = 71/229 (31.00%), Postives = 92/229 (40.17%), Query Frame = 0
Query:  196 GCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRS-LECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKW-----GCDAEQERCLFAHPFNNPQHPLSYWRLDW---ARRECILRQERRV 415
            GCA GWN  +   L   D  W L+ N D    PGAL TL + V      +P     F+ +TA     VF  T+  +  +G FDENI+PAY ED + DLR   S +   S P  F  + +H    G  E  S +S++       G       Q  K              ++R+Y   KW     GC   Q   +F  P  NP   L  W  D    AR E       RV
Sbjct:  196 GCAGGWNTIVHSTL---DSPWWLIINDDAAFVPGALRTLYDYV----SSNPNVA--FYKLTA---YQVFIITQRAVAEVGVFDENIWPAYVEDCDYDLRLKLSGVMVASRPPEF--SNIH----GDPESGSSSSLI----DTRGGGHSGYGQRSKCSHS----------NNRIYYQKKWNLSVPGC-GRQLEGMFQTPHGNPSRNLDSWTFDEEVRARSESCWEPSNRV 391          
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971515240|dbj|GAQ82940.1| (hypothetical protein KFL_001300030 [Klebsormidium nitens])

HSP 1 Score: 67.781 bits (164), Expect = 1.562e-8
Identity = 64/212 (30.19%), Postives = 87/212 (41.04%), Query Frame = 0
Query:  196 GCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRS-LECTSPPRRFVAATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGFVSSRLYVSAKW-----GCDAEQERCLFAHPFNNPQHPLSYWRLD 401
            GCA GWN  +   L   D  W L+ N D    PGAL TL + V +  D        F+ +T      VF  T+  +  +G FDENI+PAY ED + DLR   S +   S P  F  + +H    G  E  + +S++       G       Q  K              ++R+Y   KW     GC   Q   +F  P  NP   L+ W  D
Sbjct:  230 GCAGGWNTIIHSTL---DSPWWLIVNDDAAFVPGALRTLYDYVSSNPDV------AFYKLTT---YQVFLITKRAVTEVGVFDENIWPAYGEDCDYDLRLQLSGVMVASRPPEF--SNIH----GDPESGASSSLI----NTRGGGHSGYGQRSKCSHS----------NNRIYYQKKWNLSVPGC-GRQLEGMFRTPHGNPSRSLASWTFD 408          
BLAST of EWM22948.1 vs. NCBI_GenBank
Match: gi|971517018|dbj|GAQ81175.1| (hypothetical protein KFL_000730120 [Klebsormidium nitens])

HSP 1 Score: 65.855 bits (159), Expect = 6.049e-8
Identity = 101/402 (25.12%), Postives = 161/402 (40.05%), Query Frame = 0
Query:   48 AGVLCVVVYVAIIHPYSVPSLGSVVARPQYEALRQ-----AGGSAGGGGRGVYTDCLNTDTLLLTPTKPAHHA-ENDSVVDPTRRTS-----RPIPLLATNLDYDTEGFLGRLLDGWANASARHKLVV-----AGGCDPSMLKAVEYVRSQFPDVAVFREREA--LGCAPGWNRALDYMLYHEDVEWCLLFNTDVYVPPGALDTLAEEVWAEYDQDPQFCRGFFNVTAGPDAVVFAFTRHGLQALGRFDENIYPAYYEDQEMDLRHNRSLECTSPPRRFVA---ATLHHGRLGSAEYKSGTSVLRDHWRQEGKRQPRDSQLRKWERDLSNRLDRGF------VSSRLYVS---------AKWGC--DAEQERCLF--AHPFNNPQHPLSYWRLDWARRECIL 409
            AGVL  V+ +  +  Y V   G   +RP    +R      A G+ G   R +    +     L     PA  A EN   +    + +     +PIP++   +  + E +L R +        + +LVV     A   +  M +AV  + ++     V  E+    LG +  WN      L   D  W  L + DV   P AL  +A+EV  E  Q+      F++         F  TR  L  +G FDENI+P   ED+E   R  R+ +   P ++ +A   A + +GR+          +   H   E   + R +++  WE D + +    F       + RL +S         AKW    D E+++ +F    PFNNP+  L  W  D   R  ++
Sbjct:    9 AGVLSTVIGIIFVCLYGV---GFSNSRPNSVRIRSSIVEWANGTTGSRDRLLELSSVPHLEELAESIIPALFAPENYQKIRQKFKGNQFLLRKPIPVVGIPVMNNAE-WLRRTIYSIDVPVKKIQLVVNELPSASEENRKMKEAVNDIVTRLGSRFVHVEQPGCNLGVSGSWNTIFAKNL---DAPWFFLASADVAFAPAALGRVADEV--EDPQNKDILIYFYSAMR-----FFVLTRKALDVIGVFDENIWPHPVEDKEYHKRVMRA-QVLQPDKQLMAQIGAEMPNGRIFE-------EIHHVHGNDEVIGRGRGAEI--WEDDDAPKTSGAFRTNPELYAKRLKMSGGNVGAVYRAKWSTLSDEEEKKGIFNWMRPFNNPERELWSWTFDRKLRAILM 386          
The following BLAST results are available for this feature:
BLAST of EWM22948.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 8
Match NameE-valueIdentityDescription
gi|585103680|gb|EWM22948.1|0.000e+0100.00hypothetical protein Naga_100396g5 [Nannochloropsi... [more]
gi|544215241|ref|XP_005537766.1|3.032e-3231.27hypothetical protein CYME_CMP077C [Cyanidioschyzon... [more]
gi|545710685|ref|XP_005707650.1|3.145e-3130.49hypothetical protein Gasu_16270 [Galdieria sulphur... [more]
gi|971512372|dbj|GAQ85850.1|8.117e-1127.65hypothetical protein KFL_002570180 [Klebsormidium ... [more]
gi|971511909|dbj|GAQ86300.1|3.171e-929.15hypothetical protein KFL_002810080 [Klebsormidium ... [more]
gi|971519809|dbj|GAQ78373.1|6.578e-931.00hypothetical protein KFL_000120210 [Klebsormidium ... [more]
gi|971515240|dbj|GAQ82940.1|1.562e-830.19hypothetical protein KFL_001300030 [Klebsormidium ... [more]
gi|971517018|dbj|GAQ81175.1|6.049e-825.12hypothetical protein KFL_000730120 [Klebsormidium ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7746rna7746Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications